RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 ZNF224Q9NZL3 707 aa20.57■□□□□ 0.88
USP47-205ENST00000525257 GRIP1Q9Y3R0 1128 aa20.57■□□□□ 0.88
USP47-205ENST00000525257 CLIC1O00299 241 aa20.56■□□□□ 0.88
USP47-205ENST00000525257 SNNO75324 88 aaPredicted RBP20.56■□□□□ 0.88
USP47-205ENST00000525257 RAB36O95755 333 aa20.56■□□□□ 0.88
USP47-205ENST00000525257 RPS23P62266 143 aaKnown RBP20.56■□□□□ 0.88
USP47-205ENST00000525257 RAB1AP62820 205 aa20.56■□□□□ 0.88
USP47-205ENST00000525257 ACTG1P63261 375 aa20.56■□□□□ 0.88
USP47-205ENST00000525257 TNFAIP8L3Q5GJ75 292 aa20.56■□□□□ 0.88
USP47-205ENST00000525257 CEP85LQ5SZL2 805 aa20.56■□□□□ 0.88
USP47-205ENST00000525257 SLC2A7Q6PXP3 512 aa20.56■□□□□ 0.88
USP47-205ENST00000525257 OR6N1Q8NGY5 312 aa20.56■□□□□ 0.88
USP47-205ENST00000525257 NFKBIDQ8NI38 313 aa20.56■□□□□ 0.88
USP47-205ENST00000525257 MGARPQ8TDB4 240 aa20.56■□□□□ 0.88
USP47-205ENST00000525257 ZFAND2BQ8WV99 257 aa20.56■□□□□ 0.88
USP47-205ENST00000525257 GTF2H4Q92759 462 aa20.56■□□□□ 0.88
USP47-205ENST00000525257 TRIM44Q96DX7 344 aaPredicted RBP20.56■□□□□ 0.88
USP47-205ENST00000525257 SLC41A3Q96GZ6 507 aa20.56■□□□□ 0.88
USP47-205ENST00000525257 LRRC37BQ96QE4 947 aa20.56■□□□□ 0.88
USP47-205ENST00000525257 ASPNQ9BXN1 380 aa20.56■□□□□ 0.88
USP47-205ENST00000525257 RAD21L1Q9H4I0 556 aa20.56■□□□□ 0.88
USP47-205ENST00000525257 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.56■□□□□ 0.88
USP47-205ENST00000525257 CORINQ9Y5Q5 1042 aa20.56■□□□□ 0.88
USP47-205ENST00000525257 V9GYY5 206 aaPredicted RBP20.56■□□□□ 0.88
USP47-205ENST00000525257 PPIHO43447 177 aaKnown RBP20.55■□□□□ 0.88
USP47-205ENST00000525257 SERPINI2O75830 405 aa20.55■□□□□ 0.88
USP47-205ENST00000525257 NCR1O76036 304 aa20.55■□□□□ 0.88
USP47-205ENST00000525257 TFP02787 698 aa20.55■□□□□ 0.88
USP47-205ENST00000525257 BGLAPP02818 100 aa20.55■□□□□ 0.88
USP47-205ENST00000525257 NAT2P11245 290 aa20.55■□□□□ 0.88
USP47-205ENST00000525257 BMP2P12643 396 aa20.55■□□□□ 0.88
USP47-205ENST00000525257 ETS2P15036 469 aa20.55■□□□□ 0.88
USP47-205ENST00000525257 WDR4P57081 412 aaKnown RBP20.55■□□□□ 0.88
USP47-205ENST00000525257 NCALDP61601 193 aa20.55■□□□□ 0.88
USP47-205ENST00000525257 FADDQ13158 208 aa20.55■□□□□ 0.88
USP47-205ENST00000525257 FXNQ16595 210 aa20.55■□□□□ 0.88
USP47-205ENST00000525257 GLIPR1L2Q4G1C9 344 aa20.55■□□□□ 0.88
USP47-205ENST00000525257 REP15Q6BDI9 236 aa20.55■□□□□ 0.88
USP47-205ENST00000525257 ULK3Q6PHR2 472 aa20.55■□□□□ 0.88
USP47-205ENST00000525257 ZNF627Q7L945 461 aa20.55■□□□□ 0.88
USP47-205ENST00000525257 MAVSQ7Z434 540 aa20.55■□□□□ 0.88
USP47-205ENST00000525257 SLC47A1Q96FL8 570 aa20.55■□□□□ 0.88
USP47-205ENST00000525257 OR52B2Q96RD2 323 aa20.55■□□□□ 0.88
USP47-205ENST00000525257 FOXB1Q99853 325 aa20.55■□□□□ 0.88
USP47-205ENST00000525257 SELENONQ9NZV5 590 aa20.55■□□□□ 0.88
USP47-205ENST00000525257 DUSP13Q9UII6 198 aa20.55■□□□□ 0.88
USP47-205ENST00000525257 A0A1W2PPW3 197 aa20.54■□□□□ 0.88
USP47-205ENST00000525257 ZNF726A6NNF4 738 aa20.54■□□□□ 0.88
USP47-205ENST00000525257 LRRN3E7EW58 273 aa20.54■□□□□ 0.88
USP47-205ENST00000525257 UBDO15205 165 aa20.54■□□□□ 0.88
USP47-205ENST00000525257 SPRY1O43609 319 aaPredicted RBP20.54■□□□□ 0.88
USP47-205ENST00000525257 TPST1O60507 370 aa20.54■□□□□ 0.88
USP47-205ENST00000525257 GAAP10253 952 aa20.54■□□□□ 0.88
USP47-205ENST00000525257 PUDPQ08623 228 aa20.54■□□□□ 0.88
USP47-205ENST00000525257 PMS2P3Q13401 168 aa20.54■□□□□ 0.88
USP47-205ENST00000525257 RAB39AQ14964 217 aa20.54■□□□□ 0.88
USP47-205ENST00000525257 ALKBH6Q3KRA9 238 aa20.54■□□□□ 0.88
USP47-205ENST00000525257 FAM91A1Q658Y4 838 aa20.54■□□□□ 0.88
USP47-205ENST00000525257 C10orf53Q8N6V4 93 aa20.54■□□□□ 0.88
USP47-205ENST00000525257 SCAIQ8N9R8 606 aa20.54■□□□□ 0.88
USP47-205ENST00000525257 OR51F2Q8NH61 342 aa20.54■□□□□ 0.88
USP47-205ENST00000525257 ZNF418Q8TF45 676 aaPredicted RBP20.54■□□□□ 0.88
USP47-205ENST00000525257 MOGAT1Q96PD6 335 aa20.54■□□□□ 0.88
USP47-205ENST00000525257 EPYCQ99645 322 aa20.54■□□□□ 0.88
USP47-205ENST00000525257 WIPF1O43516 503 aa20.53■□□□□ 0.88
USP47-205ENST00000525257 UBL3O95164 117 aa20.53■□□□□ 0.88
USP47-205ENST00000525257 HOXB9P17482 250 aaPredicted RBP20.53■□□□□ 0.88
USP47-205ENST00000525257 TMEM33P57088 247 aa20.53■□□□□ 0.88
USP47-205ENST00000525257 SCGB2A2Q13296 93 aa20.53■□□□□ 0.88
USP47-205ENST00000525257 FAHD2BQ6P2I3 314 aaPredicted RBP20.53■□□□□ 0.88
USP47-205ENST00000525257 DHRS4L2Q6PKH6 230 aa20.53■□□□□ 0.88
USP47-205ENST00000525257 NHLRC1Q6VVB1 395 aa20.53■□□□□ 0.88
USP47-205ENST00000525257 SNX32Q86XE0 403 aa20.53■□□□□ 0.88
USP47-205ENST00000525257 MIER2Q8N344 545 aa20.53■□□□□ 0.88
USP47-205ENST00000525257 OR6S1Q8NH40 331 aa20.53■□□□□ 0.88
USP47-205ENST00000525257 FAHD2AQ96GK7 314 aa20.53■□□□□ 0.88
USP47-205ENST00000525257 DENND2DQ9H6A0 471 aaPredicted RBP20.53■□□□□ 0.88
USP47-205ENST00000525257 TESQ9UGI8 421 aaKnown RBP20.53■□□□□ 0.88
USP47-205ENST00000525257 MEGF8Q7Z7M0 2845 aa20.52■□□□□ 0.88
USP47-205ENST00000525257 PATE4P0C8F1 98 aa20.52■□□□□ 0.88
USP47-205ENST00000525257 ARAFP10398 606 aa20.52■□□□□ 0.88
USP47-205ENST00000525257 AHCYP23526 432 aa20.52■□□□□ 0.88
USP47-205ENST00000525257 LSP1P33241 339 aa20.52■□□□□ 0.88
USP47-205ENST00000525257 CSNK1A1P48729 337 aa20.52■□□□□ 0.88
USP47-205ENST00000525257 RGS8P57771 180 aaPredicted RBP20.52■□□□□ 0.88
USP47-205ENST00000525257 LMO4P61968 165 aa20.52■□□□□ 0.88
USP47-205ENST00000525257 GCNT6Q5T4J0 391 aa20.52■□□□□ 0.88
USP47-205ENST00000525257 C10orf111Q8N326 155 aa20.52■□□□□ 0.88
USP47-205ENST00000525257 GOLGA6L1Q8N7Z2 621 aa20.52■□□□□ 0.88
USP47-205ENST00000525257 TMEM27Q9HBJ8 222 aa20.52■□□□□ 0.88
USP47-205ENST00000525257 MRPL39Q9NYK5 338 aaKnown RBP20.52■□□□□ 0.88
USP47-205ENST00000525257 SLC7A8Q9UHI5 535 aa20.52■□□□□ 0.88
USP47-205ENST00000525257 A0A0B4J2E0 115 aa20.51■□□□□ 0.87
USP47-205ENST00000525257 A0A1B0GX12 115 aa20.51■□□□□ 0.87
USP47-205ENST00000525257 TMEM120BA0PK00 339 aa20.51■□□□□ 0.87
USP47-205ENST00000525257 RP2O75695 350 aa20.51■□□□□ 0.87
USP47-205ENST00000525257 MAGEB1P43366 347 aa20.51■□□□□ 0.87
USP47-205ENST00000525257 OR1Q1Q15612 314 aa20.51■□□□□ 0.87
USP47-205ENST00000525257 NKPD1Q17RQ9 610 aa20.51■□□□□ 0.87
USP47-205ENST00000525257 REEP3Q6NUK4 255 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms