RNA–Protein interactions for RNA: ENST00000525214.1

COPB1-203, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-203ENST00000525214 RAP1AP62834 184 aa2.19□□□□□ -2.06
COPB1-203ENST00000525214 HTD2P86397 168 aa2.19□□□□□ -2.06
COPB1-203ENST00000525214 INAQ16352 499 aa2.19□□□□□ -2.06
COPB1-203ENST00000525214 BLOC1S2Q6QNY1 142 aa2.19□□□□□ -2.06
COPB1-203ENST00000525214 NCCRP1Q6ZVX7 275 aaPredicted RBP2.19□□□□□ -2.06
COPB1-203ENST00000525214 ACOT4Q8N9L9 421 aa2.19□□□□□ -2.06
COPB1-203ENST00000525214 OR4D5Q8NGN0 318 aa2.19□□□□□ -2.06
COPB1-203ENST00000525214 UFD1Q92890 307 aa2.19□□□□□ -2.06
COPB1-203ENST00000525214 EFHD2Q96C19 240 aaPredicted RBP2.19□□□□□ -2.06
COPB1-203ENST00000525214 NEURL3Q96EH8 262 aa2.19□□□□□ -2.06
COPB1-203ENST00000525214 LY9Q9HBG7 655 aa2.19□□□□□ -2.06
COPB1-203ENST00000525214 GIN1Q9NXP7 522 aa2.19□□□□□ -2.06
COPB1-203ENST00000525214 TAS2R3Q9NYW6 316 aa2.19□□□□□ -2.06
COPB1-203ENST00000525214 ACTR3BQ9P1U1 418 aa2.19□□□□□ -2.06
COPB1-203ENST00000525214 SH3BGRL2Q9UJC5 107 aa2.19□□□□□ -2.06
COPB1-203ENST00000525214 BLOC1S6Q9UL45 172 aa2.19□□□□□ -2.06
COPB1-203ENST00000525214 TMEM14AQ9Y6G1 99 aa2.19□□□□□ -2.06
COPB1-203ENST00000525214 FANCIQ9NVI1 1328 aa2.18□□□□□ -2.06
COPB1-203ENST00000525214 GPATCH8Q9UKJ3 1502 aaKnown RBP2.18□□□□□ -2.06
COPB1-203ENST00000525214 IGLV1-50A0A075B6I6 118 aa2.18□□□□□ -2.06
COPB1-203ENST00000525214 HMMRO75330 724 aa2.18□□□□□ -2.06
COPB1-203ENST00000525214 OXSR1O95747 527 aaPredicted RBP2.18□□□□□ -2.06
COPB1-203ENST00000525214 UBTFL1P0CB47 393 aaPredicted RBP2.18□□□□□ -2.06
COPB1-203ENST00000525214 IGHV1-8P0DP01 117 aa2.18□□□□□ -2.06
COPB1-203ENST00000525214 COL8A2P25067 703 aa2.18□□□□□ -2.06
COPB1-203ENST00000525214 DUSP7Q16829 419 aa2.18□□□□□ -2.06
COPB1-203ENST00000525214 NCR3LG1Q68D85 454 aa2.18□□□□□ -2.06
COPB1-203ENST00000525214 CCDC65Q8IXS2 484 aa2.18□□□□□ -2.06
COPB1-203ENST00000525214 PIANPQ8IYJ0 282 aa2.18□□□□□ -2.06
COPB1-203ENST00000525214 OR10T2Q8NGX3 314 aa2.18□□□□□ -2.06
COPB1-203ENST00000525214 TSSK3Q96PN8 268 aa2.18□□□□□ -2.06
COPB1-203ENST00000525214 TSGA13Q96PP4 275 aa2.18□□□□□ -2.06
COPB1-203ENST00000525214 MYCBPQ99417 103 aaPredicted RBP2.18□□□□□ -2.06
COPB1-203ENST00000525214 OMDQ99983 421 aa2.18□□□□□ -2.06
COPB1-203ENST00000525214 GBA3Q9H227 469 aa2.18□□□□□ -2.06
COPB1-203ENST00000525214 LINC00597Q9H2U6 94 aa2.18□□□□□ -2.06
COPB1-203ENST00000525214 POLE3Q9NRF9 147 aa2.18□□□□□ -2.06
COPB1-203ENST00000525214 CRCT1Q9UGL9 99 aa2.18□□□□□ -2.06
COPB1-203ENST00000525214 CARHSP1Q9Y2V2 147 aaKnown RBP2.18□□□□□ -2.06
COPB1-203ENST00000525214 IKBKGQ9Y6K9 419 aa2.18□□□□□ -2.06
COPB1-203ENST00000525214 ITGB4P16144 1822 aa2.17□□□□□ -2.06
COPB1-203ENST00000525214 IGHV5-10-1A0A0J9YXX1 117 aa2.17□□□□□ -2.06
COPB1-203ENST00000525214 BCAS1O75363 584 aaPredicted RBP2.17□□□□□ -2.06
COPB1-203ENST00000525214 CCNKO75909 580 aa2.17□□□□□ -2.06
COPB1-203ENST00000525214 HEXBP07686 556 aa2.17□□□□□ -2.06
COPB1-203ENST00000525214 CA8P35219 290 aa2.17□□□□□ -2.06
COPB1-203ENST00000525214 QARSP47897 775 aaKnown RBP2.17□□□□□ -2.06
COPB1-203ENST00000525214 POLR2FP61218 127 aaKnown RBP2.17□□□□□ -2.06
COPB1-203ENST00000525214 DUX4L9Q6RFH8 374 aaPredicted RBP2.17□□□□□ -2.06
COPB1-203ENST00000525214 IPMKQ8NFU5 416 aa2.17□□□□□ -2.06
COPB1-203ENST00000525214 OR52H1Q8NGJ2 320 aa2.17□□□□□ -2.06
COPB1-203ENST00000525214 CCDC110Q8TBZ0 833 aa2.17□□□□□ -2.06
COPB1-203ENST00000525214 SYAP1Q96A49 352 aaPredicted RBP2.17□□□□□ -2.06
COPB1-203ENST00000525214 SECISBP2Q96T21 854 aaKnown RBP2.17□□□□□ -2.06
COPB1-203ENST00000525214 GABARAPL3Q9BY60 117 aa2.17□□□□□ -2.06
COPB1-203ENST00000525214 MEMO1Q9Y316 297 aa2.17□□□□□ -2.06
COPB1-203ENST00000525214 AP1M2Q9Y6Q5 423 aa2.17□□□□□ -2.06
COPB1-203ENST00000525214 S4R3C0 116 aa2.17□□□□□ -2.06
COPB1-203ENST00000525214 CEMIPQ8WUJ3 1361 aa2.17□□□□□ -2.06
COPB1-203ENST00000525214 TNS2Q63HR2 1409 aa2.17□□□□□ -2.06
COPB1-203ENST00000525214 IGLV3-22A0A075B6J6 115 aa2.16□□□□□ -2.06
COPB1-203ENST00000525214 SYNJ2BP-COX16A0A087WUM0 186 aa2.16□□□□□ -2.06
COPB1-203ENST00000525214 IGKV1D-13A0A0B4J2D9 117 aa2.16□□□□□ -2.06
COPB1-203ENST00000525214 HSD17B6O14756 317 aa2.16□□□□□ -2.06
COPB1-203ENST00000525214 MAPK13O15264 365 aa2.16□□□□□ -2.06
COPB1-203ENST00000525214 CLDN3O15551 220 aa2.16□□□□□ -2.06
COPB1-203ENST00000525214 IGKV1-13P0DP09 117 aa2.16□□□□□ -2.06
COPB1-203ENST00000525214 IL12AP29459 219 aa2.16□□□□□ -2.06
COPB1-203ENST00000525214 PRPHP41219 470 aa2.16□□□□□ -2.06
COPB1-203ENST00000525214 LOXL1Q08397 574 aaPredicted RBP2.16□□□□□ -2.06
COPB1-203ENST00000525214 ZNF816Q0VGE8 651 aaPredicted RBP2.16□□□□□ -2.06
COPB1-203ENST00000525214 HES5Q5TA89 166 aa2.16□□□□□ -2.06
COPB1-203ENST00000525214 STRADAQ7RTN6 431 aa2.16□□□□□ -2.06
COPB1-203ENST00000525214 FNDC5Q8NAU1 212 aa2.16□□□□□ -2.06
COPB1-203ENST00000525214 KIF3AQ9Y496 699 aa2.16□□□□□ -2.06
COPB1-203ENST00000525214 OR10H1Q9Y4A9 318 aa2.16□□□□□ -2.06
COPB1-203ENST00000525214 SDK2Q58EX2 2172 aa2.15□□□□□ -2.07
COPB1-203ENST00000525214 A0A1B0GVI7 797 aa2.15□□□□□ -2.07
COPB1-203ENST00000525214 TMEM223A0PJW6 202 aa2.15□□□□□ -2.07
COPB1-203ENST00000525214 RGSL1A5PLK6 1076 aa2.15□□□□□ -2.07
COPB1-203ENST00000525214 MPHOSPH10O00566 681 aaKnown RBP2.15□□□□□ -2.07
COPB1-203ENST00000525214 ATP5LO75964 103 aa2.15□□□□□ -2.07
COPB1-203ENST00000525214 MFN2O95140 757 aa2.15□□□□□ -2.07
COPB1-203ENST00000525214 AK1P00568 194 aa2.15□□□□□ -2.07
COPB1-203ENST00000525214 FOLR1P15328 257 aa2.15□□□□□ -2.07
COPB1-203ENST00000525214 ACAA2P42765 397 aaKnown RBP2.15□□□□□ -2.07
COPB1-203ENST00000525214 CDC20Q12834 499 aa2.15□□□□□ -2.07
COPB1-203ENST00000525214 AQP6Q13520 282 aa2.15□□□□□ -2.07
COPB1-203ENST00000525214 SELPLGQ14242 412 aa2.15□□□□□ -2.07
COPB1-203ENST00000525214 GALNT17Q6IS24 598 aa2.15□□□□□ -2.07
COPB1-203ENST00000525214 CNIH2Q6PI25 160 aa2.15□□□□□ -2.07
COPB1-203ENST00000525214 BHLHA15Q7RTS1 189 aaPredicted RBP2.15□□□□□ -2.07
COPB1-203ENST00000525214 LGI3Q8N145 548 aa2.15□□□□□ -2.07
COPB1-203ENST00000525214 RNF139Q8WU17 664 aa2.15□□□□□ -2.07
COPB1-203ENST00000525214 ZCCHC13Q8WW36 166 aaKnown RBP2.15□□□□□ -2.07
COPB1-203ENST00000525214 GEMIN6Q8WXD5 167 aaKnown RBP2.15□□□□□ -2.07
COPB1-203ENST00000525214 TRIM44Q96DX7 344 aaPredicted RBP2.15□□□□□ -2.07
COPB1-203ENST00000525214 LIN28AQ9H9Z2 209 aaKnown RBP2.15□□□□□ -2.07
COPB1-203ENST00000525214 PACSIN2Q9UNF0 486 aaPredicted RBP2.15□□□□□ -2.07
COPB1-203ENST00000525214 AURKCQ9UQB9 309 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms