RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 LYPD4Q6UWN0 246 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 TFAP2EQ6VUC0 442 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 C1orf229Q6ZS94 237 aaPredicted RBP5.73□□□□□ -1.49
CD44-214ENST00000525211 PTCHD4Q6ZW05 846 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 CHMP1BQ7LBR1 199 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 NANOGNBQ7Z5D8 188 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 BCDIN3DQ7Z5W3 292 aaKnown RBP5.73□□□□□ -1.49
CD44-214ENST00000525211 OAFQ86UD1 273 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 TMEM123Q8N131 208 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 CBR4Q8N4T8 237 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 CNEP1R1Q8N9A8 125 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 ADPRHL1Q8NDY3 354 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 ZNF519Q8TB69 540 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 ASB10Q8WXI3 467 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 HDAC2Q92769 488 aaKnown RBP5.73□□□□□ -1.49
CD44-214ENST00000525211 UBE2FQ969M7 185 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 SDCCAG3Q96C92 435 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 NMD3Q96D46 503 aaKnown RBP5.73□□□□□ -1.49
CD44-214ENST00000525211 FOXN4Q96NZ1 517 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 OXGR1Q96P68 337 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 OR2M2Q96R28 347 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 DDOQ99489 341 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 KATNB1Q9BVA0 655 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 OSBPL10Q9BXB5 764 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 HCAR1Q9BXC0 346 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 ASPNQ9BXN1 380 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 PRRG4Q9BZD6 226 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 GABARAPL1Q9H0R8 117 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 OR52D1Q9H346 318 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 FN3KQ9H479 309 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 BCO1Q9HAY6 547 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 SLC7A10Q9NS82 523 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 PRDM4Q9UKN5 801 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 MCTS1Q9ULC4 181 aaKnown RBP5.73□□□□□ -1.49
CD44-214ENST00000525211 TMCC3Q9ULS5 477 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 IER3IP1Q9Y5U9 82 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 FLNCQ14315 2725 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 LOC102725191A0A1B0GVB3 256 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 ZNF503-AS2A6NEH8 195 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 WIPF3A6NGB9 483 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 ZNF724A8MTY0 619 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 G3V2T6 193 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 J3QKU1 62 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 DCTN6O00399 190 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 RNF13O43567 381 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 DNPH1O43598 174 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 OR2T1O43869 369 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 TRMUO75648 421 aaKnown RBP5.72□□□□□ -1.49
CD44-214ENST00000525211 SNAP29O95721 258 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 CLDN1O95832 211 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 ALPLP05186 524 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 YES1P07947 543 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 CLUP10909 449 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 EPXP11678 715 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 HIST1H1CP16403 213 aaKnown RBP5.72□□□□□ -1.49
CD44-214ENST00000525211 BMP5P22003 454 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 CTSSP25774 331 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 FKBP2P26885 142 aaKnown RBP5.72□□□□□ -1.49
CD44-214ENST00000525211 NOS3P29474 1203 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 CCKARP32238 428 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 MAP2K6P52564 334 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 BIDP55957 195 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 FMODQ06828 376 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 TFF3Q07654 80 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 FAM27E3Q08E93 113 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 PDK3Q15120 406 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 POU4F3Q15319 338 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 TRIP10Q15642 601 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 RFX4Q33E94 735 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 SLC36A3Q495N2 470 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 ALG10Q5BKT4 473 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 PDSS1Q5T2R2 415 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 OGFRL1Q5TC84 451 aaPredicted RBP5.72□□□□□ -1.49
CD44-214ENST00000525211 NIPAL3Q6P499 406 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 LRFN4Q6PJG9 635 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 C5orf46Q6UWT4 87 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 CASP12Q6UXS9 341 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 CD300LDQ6UXZ3 194 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 RASSF6Q6ZTQ3 369 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 SLC35D2Q76EJ3 337 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 FAM214BQ7L5A3 538 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 LUZP2Q86TE4 346 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 GALNT4Q8N4A0 578 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 SCAIQ8N9R8 606 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 SYT14Q8NB59 555 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 FGFBP3Q8TAT2 258 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 FANK1Q8TC84 345 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 RND1Q92730 232 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 DTNBP1Q96EV8 351 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 NRBF2Q96F24 287 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 GMPPAQ96IJ6 420 aaPredicted RBP5.72□□□□□ -1.49
CD44-214ENST00000525211 TSSK2Q96PF2 358 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 NAA11Q9BSU3 229 aaPredicted RBP5.72□□□□□ -1.49
CD44-214ENST00000525211 TSSK6Q9BXA6 273 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 KLHL4Q9C0H6 718 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 MED20Q9H944 212 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 RNPEPL1Q9HAU8 725 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 FANCFQ9NPI8 374 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 NRIP3Q9NQ35 241 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 INIPQ9NRY2 104 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms