RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 WDR34Q96EX3 536 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 ITCHQ96J02 903 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 CCDC42Q96M95 316 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 CPXM1Q96SM3 734 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 KRTAP4-9Q9BYQ8 210 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 RAB34Q9BZG1 259 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 SLC22A4Q9H015 551 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 FGF20Q9NP95 211 aaPredicted RBP3.9□□□□□ -1.79
CD44-213ENST00000525209 A4GALTQ9NPC4 353 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 BATF3Q9NR55 127 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 NLE1Q9NVX2 485 aaPredicted RBP3.9□□□□□ -1.79
CD44-213ENST00000525209 CYB5R1Q9UHQ9 305 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 ZDHHC2Q9UIJ5 367 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 EXOSC1Q9Y3B2 195 aaKnown RBP3.9□□□□□ -1.79
CD44-213ENST00000525209 R4GN57 208 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 EP400Q96L91 3159 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 E9PCH4 1651 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 ABCC5O15440 1437 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 GNG14A0A1W2PPG7 69 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 UNC119BA6NIH7 251 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 PP2D1A8MPX8 630 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 ZNF487B1APH4 448 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 K7EN84 100 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 PLPP3O14495 311 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 TM9SF1O15321 606 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 B4GALT3O60512 393 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 ANXA9O76027 345 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 UTS2O95399 124 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 TIMP1P01033 207 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 ORM1P02763 201 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 ATP1B1P05026 303 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 RHOCP08134 193 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 ABOP16442 354 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 MGMTP16455 207 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 CHRNB2P17787 502 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 COMTP21964 271 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 CCNE1P24864 410 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 HOXD3P31249 432 aaPredicted RBP3.89□□□□□ -1.79
CD44-213ENST00000525209 TGFBR2P37173 567 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 DDOSTP39656 456 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 AVPR1BP47901 424 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 DAP3P51398 398 aaKnown RBP3.89□□□□□ -1.79
CD44-213ENST00000525209 B3GALT5-AS1P59052 145 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 OR2B8PP59922 312 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 DHODHQ02127 395 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 STX4Q12846 297 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 RBM39Q14498 530 aaKnown RBP3.89□□□□□ -1.79
CD44-213ENST00000525209 INPP5JQ15735 1006 aaPredicted RBP3.89□□□□□ -1.79
CD44-213ENST00000525209 UBE2V2Q15819 145 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 DUSP6Q16828 381 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 MIDNQ504T8 468 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 CYBRD1Q53TN4 286 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 PAPPA-AS1Q5QFB9 102 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 SYPL2Q5VXT5 272 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 ZNF836Q6ZNA1 936 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 APTXQ7Z2E3 356 aaKnown RBP3.89□□□□□ -1.79
CD44-213ENST00000525209 ARHGEF19Q8IW93 802 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 CMTM1Q8IZ96 169 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 LINC01561Q8N1V8 128 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 KIF2BQ8N4N8 673 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 CATSPER1Q8NEC5 780 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 OR4F17Q8NGA8 305 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 OR4K2Q8NGD2 314 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 OR4F5Q8NH21 305 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 OR52N5Q8NH56 324 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 ACER1Q8TDN7 264 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 PTH2Q96A98 100 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 ZBED6CLQ96FA7 236 aaPredicted RBP3.89□□□□□ -1.79
CD44-213ENST00000525209 WFIKKN1Q96NZ8 548 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 SERPINB12Q96P63 405 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 NEDD4LQ96PU5 975 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 OR4F4Q96R69 305 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 IL12RB2Q99665 862 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 WDR77Q9BQA1 342 aaPredicted RBP3.89□□□□□ -1.79
CD44-213ENST00000525209 TRIM51Q9BSJ1 452 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 ING2Q9H160 280 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 METTL9Q9H1A3 318 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 ARMC7Q9H6L4 198 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 NHEJ1Q9H9Q4 299 aaPredicted RBP3.89□□□□□ -1.79
CD44-213ENST00000525209 BEX1Q9HBH7 125 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 RETNQ9HD89 108 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 NRN1Q9NPD7 142 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 ASCL3Q9NQ33 180 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 EXD2Q9NVH0 621 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 PAK1IP1Q9NWT1 392 aaPredicted RBP3.89□□□□□ -1.79
CD44-213ENST00000525209 OPN4Q9UHM6 478 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 ST6GALNAC2Q9UJ37 374 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 ERVW-1Q9UQF0 538 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 RCL1Q9Y2P8 373 aaKnown RBP3.89□□□□□ -1.79
CD44-213ENST00000525209 PAM16Q9Y3D7 125 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 CSNK1G3Q9Y6M4 447 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 BCL9LQ86UU0 1499 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 UNC13BO14795 1591 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 ADGRB2O60241 1585 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 GLI3P10071 1580 aa3.89□□□□□ -1.79
CD44-213ENST00000525209 EIF3AQ14152 1382 aaKnown RBP3.89□□□□□ -1.79
CD44-213ENST00000525209 ZFYVE9O95405 1425 aa3.88□□□□□ -1.79
CD44-213ENST00000525209 DCCP43146 1447 aa3.88□□□□□ -1.79
CD44-213ENST00000525209 ADAMTS13Q76LX8 1427 aa3.88□□□□□ -1.79
CD44-213ENST00000525209 SPHKAPQ2M3C7 1700 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms