RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 NPDC1Q9NQX5 325 aaPredicted RBP10.07□□□□□ -0.8
HDAC9-228ENST00000524023 GRHPRQ9UBQ7 328 aa10.07□□□□□ -0.8
HDAC9-228ENST00000524023 GMEB2Q9UKD1 530 aa10.07□□□□□ -0.8
HDAC9-228ENST00000524023 CYP8B1Q9UNU6 501 aa10.07□□□□□ -0.8
HDAC9-228ENST00000524023 ETV7Q9Y603 341 aa10.07□□□□□ -0.8
HDAC9-228ENST00000524023 AUP1Q9Y679 476 aa10.07□□□□□ -0.8
HDAC9-228ENST00000524023 ALPK2Q86TB3 2170 aa10.06□□□□□ -0.8
HDAC9-228ENST00000524023 ACOT7O00154 380 aa10.06□□□□□ -0.8
HDAC9-228ENST00000524023 ZNF264O43296 627 aa10.06□□□□□ -0.8
HDAC9-228ENST00000524023 MPC2O95563 127 aa10.06□□□□□ -0.8
HDAC9-228ENST00000524023 CAPZBP47756 277 aa10.06□□□□□ -0.8
HDAC9-228ENST00000524023 GABRA4P48169 554 aa10.06□□□□□ -0.8
HDAC9-228ENST00000524023 BLKP51451 505 aa10.06□□□□□ -0.8
HDAC9-228ENST00000524023 BLVRAP53004 296 aa10.06□□□□□ -0.8
HDAC9-228ENST00000524023 TAS2R20P59543 309 aa10.06□□□□□ -0.8
HDAC9-228ENST00000524023 ARPC4P59998 168 aa10.06□□□□□ -0.8
HDAC9-228ENST00000524023 SNTA1Q13424 505 aa10.06□□□□□ -0.8
HDAC9-228ENST00000524023 SERTAD2Q14140 314 aa10.06□□□□□ -0.8
HDAC9-228ENST00000524023 EMC4Q5J8M3 183 aa10.06□□□□□ -0.8
HDAC9-228ENST00000524023 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.06□□□□□ -0.8
HDAC9-228ENST00000524023 DNAAF1Q8NEP3 725 aa10.06□□□□□ -0.8
HDAC9-228ENST00000524023 OIT3Q8WWZ8 545 aa10.06□□□□□ -0.8
HDAC9-228ENST00000524023 CCDC74AQ96AQ1 378 aa10.06□□□□□ -0.8
HDAC9-228ENST00000524023 CLIP3Q96DZ5 547 aa10.06□□□□□ -0.8
HDAC9-228ENST00000524023 KTI12Q96EK9 354 aaPredicted RBP10.06□□□□□ -0.8
HDAC9-228ENST00000524023 LCORQ96JN0 433 aaPredicted RBP10.06□□□□□ -0.8
HDAC9-228ENST00000524023 KLHDC3Q9BQ90 382 aa10.06□□□□□ -0.8
HDAC9-228ENST00000524023 PELOQ9BRX2 385 aaKnown RBP10.06□□□□□ -0.8
HDAC9-228ENST00000524023 C8orf33Q9H7E9 229 aaPredicted RBP10.06□□□□□ -0.8
HDAC9-228ENST00000524023 FKRPQ9H9S5 495 aa10.06□□□□□ -0.8
HDAC9-228ENST00000524023 TAS2R10Q9NYW0 307 aa10.06□□□□□ -0.8
HDAC9-228ENST00000524023 LAMP5Q9UJQ1 280 aa10.06□□□□□ -0.8
HDAC9-228ENST00000524023 IKZF2Q9UKS7 526 aa10.06□□□□□ -0.8
HDAC9-228ENST00000524023 FBXL3Q9UKT7 428 aa10.06□□□□□ -0.8
HDAC9-228ENST00000524023 SLCO1B1Q9Y6L6 691 aa10.06□□□□□ -0.8
HDAC9-228ENST00000524023 OR4C45A6NMZ5 311 aa10.05□□□□□ -0.8
HDAC9-228ENST00000524023 CHURC1-FNTBB4DL54 471 aa10.05□□□□□ -0.8
HDAC9-228ENST00000524023 TOXO94900 526 aa10.05□□□□□ -0.8
HDAC9-228ENST00000524023 AKR7A3O95154 331 aa10.05□□□□□ -0.8
HDAC9-228ENST00000524023 UTS2O95399 124 aa10.05□□□□□ -0.8
HDAC9-228ENST00000524023 LDOC1O95751 146 aaPredicted RBP10.05□□□□□ -0.8
HDAC9-228ENST00000524023 PROS1P07225 676 aa10.05□□□□□ -0.8
HDAC9-228ENST00000524023 ATXN8OSP0DMR3 200 aa10.05□□□□□ -0.8
HDAC9-228ENST00000524023 LCN1P31025 176 aa10.05□□□□□ -0.8
HDAC9-228ENST00000524023 DCTDP32321 178 aa10.05□□□□□ -0.8
HDAC9-228ENST00000524023 RAD52P43351 418 aa10.05□□□□□ -0.8
HDAC9-228ENST00000524023 PPICP45877 212 aa10.05□□□□□ -0.8
HDAC9-228ENST00000524023 FNTBP49356 437 aa10.05□□□□□ -0.8
HDAC9-228ENST00000524023 EPHA4P54764 986 aa10.05□□□□□ -0.8
HDAC9-228ENST00000524023 SLC37A1P57057 533 aa10.05□□□□□ -0.8
HDAC9-228ENST00000524023 LINC00303Q3SY05 128 aa10.05□□□□□ -0.8
HDAC9-228ENST00000524023 GPR139Q6DWJ6 353 aa10.05□□□□□ -0.8
HDAC9-228ENST00000524023 SLC25A25Q6KCM7 469 aa10.05□□□□□ -0.8
HDAC9-228ENST00000524023 FAAP20Q6NZ36 180 aa10.05□□□□□ -0.8
HDAC9-228ENST00000524023 LRRN1Q6UXK5 716 aa10.05□□□□□ -0.8
HDAC9-228ENST00000524023 GLDNQ6ZMI3 551 aaPredicted RBP10.05□□□□□ -0.8
HDAC9-228ENST00000524023 OR6N2Q8NGY6 317 aa10.05□□□□□ -0.8
HDAC9-228ENST00000524023 OR2G2Q8NGZ5 317 aa10.05□□□□□ -0.8
HDAC9-228ENST00000524023 OR2T4Q8NH00 348 aa10.05□□□□□ -0.8
HDAC9-228ENST00000524023 PTPMT1Q8WUK0 201 aaPredicted RBP10.05□□□□□ -0.8
HDAC9-228ENST00000524023 TAAR8Q969N4 342 aa10.05□□□□□ -0.8
HDAC9-228ENST00000524023 SEC22CQ9BRL7 303 aa10.05□□□□□ -0.8
HDAC9-228ENST00000524023 NXF5Q9H1B4 397 aaKnown RBP10.05□□□□□ -0.8
HDAC9-228ENST00000524023 CLEC4MQ9H2X3 399 aaPredicted RBP10.05□□□□□ -0.8
HDAC9-228ENST00000524023 CACNA1CQ13936 2221 aa10.05□□□□□ -0.8
HDAC9-228ENST00000524023 TRAV8-7A0A075B6U6 113 aa10.05□□□□□ -0.8
HDAC9-228ENST00000524023 TRBV5-7A0A0A0MS05 114 aa10.05□□□□□ -0.8
HDAC9-228ENST00000524023 ANXA2P2A6NMY6 339 aa10.05□□□□□ -0.8
HDAC9-228ENST00000524023 ICMTO60725 284 aa10.05□□□□□ -0.8
HDAC9-228ENST00000524023 ZNF254O75437 659 aa10.05□□□□□ -0.8
HDAC9-228ENST00000524023 IFNA7P01567 189 aa10.05□□□□□ -0.8
HDAC9-228ENST00000524023 MAS1P04201 325 aa10.05□□□□□ -0.8
HDAC9-228ENST00000524023 ANXA2P07355 339 aaKnown RBP10.05□□□□□ -0.8
HDAC9-228ENST00000524023 TMIGD3P0DMS9 266 aaPredicted RBP10.05□□□□□ -0.8
HDAC9-228ENST00000524023 ALOX5APP20292 161 aa10.05□□□□□ -0.8
HDAC9-228ENST00000524023 CD1CP29017 333 aa10.05□□□□□ -0.8
HDAC9-228ENST00000524023 TACR3P29371 465 aa10.05□□□□□ -0.8
HDAC9-228ENST00000524023 RPS27P42677 84 aaKnown RBP10.05□□□□□ -0.8
HDAC9-228ENST00000524023 PUDPQ08623 228 aa10.05□□□□□ -0.8
HDAC9-228ENST00000524023 EXOSC2Q13868 293 aaKnown RBP10.05□□□□□ -0.8
HDAC9-228ENST00000524023 CCINQ13939 588 aa10.05□□□□□ -0.8
HDAC9-228ENST00000524023 TOR2AQ5JU69 321 aa10.05□□□□□ -0.8
HDAC9-228ENST00000524023 EEF1A1P5Q5VTE0 462 aa10.05□□□□□ -0.8
HDAC9-228ENST00000524023 DNM1P46Q6ZS02 220 aa10.05□□□□□ -0.8
HDAC9-228ENST00000524023 DPY19L4Q7Z388 723 aa10.05□□□□□ -0.8
HDAC9-228ENST00000524023 TMPRSS12Q86WS5 348 aa10.05□□□□□ -0.8
HDAC9-228ENST00000524023 FTMTQ8N4E7 242 aa10.05□□□□□ -0.8
HDAC9-228ENST00000524023 SPICQ8N5J4 248 aa10.05□□□□□ -0.8
HDAC9-228ENST00000524023 ZNF676Q8N7Q3 588 aa10.05□□□□□ -0.8
HDAC9-228ENST00000524023 OR10AC1Q8NH08 325 aa10.05□□□□□ -0.8
HDAC9-228ENST00000524023 ZNF563Q8TA94 476 aa10.05□□□□□ -0.8
HDAC9-228ENST00000524023 C15orf40Q8WUR7 153 aa10.05□□□□□ -0.8
HDAC9-228ENST00000524023 MARVELD3Q96A59 401 aa10.05□□□□□ -0.8
HDAC9-228ENST00000524023 KLHDC7BQ96G42 594 aa10.05□□□□□ -0.8
HDAC9-228ENST00000524023 KLHL15Q96M94 604 aa10.05□□□□□ -0.8
HDAC9-228ENST00000524023 MNTQ99583 582 aa10.05□□□□□ -0.8
HDAC9-228ENST00000524023 UTP23Q9BRU9 249 aaKnown RBP10.05□□□□□ -0.8
HDAC9-228ENST00000524023 ADAM19Q9H013 955 aa10.05□□□□□ -0.8
HDAC9-228ENST00000524023 WDR76Q9H967 626 aa10.05□□□□□ -0.8
HDAC9-228ENST00000524023 TAS2R5Q9NYW4 299 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms