RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 IL18R1Q13478 541 aa11.9□□□□□ -0.5
CLK4-210ENST00000522136 MED21Q13503 144 aa11.9□□□□□ -0.5
CLK4-210ENST00000522136 CAMK2DQ13557 499 aa11.9□□□□□ -0.5
CLK4-210ENST00000522136 MAD2L1BPQ15013 274 aaPredicted RBP11.9□□□□□ -0.5
CLK4-210ENST00000522136 CARD17Q5XLA6 110 aa11.9□□□□□ -0.5
CLK4-210ENST00000522136 RTL6Q6ICC9 239 aa11.9□□□□□ -0.5
CLK4-210ENST00000522136 P4HA3Q7Z4N8 544 aa11.9□□□□□ -0.5
CLK4-210ENST00000522136 THAP5Q7Z6K1 395 aa11.9□□□□□ -0.5
CLK4-210ENST00000522136 CPOQ8IVL8 374 aa11.9□□□□□ -0.5
CLK4-210ENST00000522136 TUSC5Q8IXB3 177 aa11.9□□□□□ -0.5
CLK4-210ENST00000522136 DEPDC4Q8N2C3 294 aa11.9□□□□□ -0.5
CLK4-210ENST00000522136 SYT14Q8NB59 555 aa11.9□□□□□ -0.5
CLK4-210ENST00000522136 SLC37A3Q8NCC5 494 aa11.9□□□□□ -0.5
CLK4-210ENST00000522136 NPEPL1Q8NDH3 523 aa11.9□□□□□ -0.5
CLK4-210ENST00000522136 SETD9Q8NE22 299 aa11.9□□□□□ -0.5
CLK4-210ENST00000522136 RHOXF1Q8NHV9 184 aa11.9□□□□□ -0.5
CLK4-210ENST00000522136 APH1BQ8WW43 257 aa11.9□□□□□ -0.5
CLK4-210ENST00000522136 HDAC2Q92769 488 aaKnown RBP11.9□□□□□ -0.5
CLK4-210ENST00000522136 BBC3Q96PG8 261 aaPredicted RBP11.9□□□□□ -0.5
CLK4-210ENST00000522136 HINT3Q9NQE9 182 aaKnown RBP11.9□□□□□ -0.5
CLK4-210ENST00000522136 ZNF175Q9Y473 711 aa11.9□□□□□ -0.5
CLK4-210ENST00000522136 RP1L1Q8IWN7 2480 aaPredicted RBP11.9□□□□□ -0.51
CLK4-210ENST00000522136 OR6C68A6NDL8 312 aa11.89□□□□□ -0.51
CLK4-210ENST00000522136 RIIAD1A6NNX1 92 aa11.89□□□□□ -0.51
CLK4-210ENST00000522136 SLC19A2O60779 497 aa11.89□□□□□ -0.51
CLK4-210ENST00000522136 TRMUO75648 421 aaKnown RBP11.89□□□□□ -0.51
CLK4-210ENST00000522136 CLUP10909 449 aa11.89□□□□□ -0.51
CLK4-210ENST00000522136 EDN3P14138 238 aa11.89□□□□□ -0.51
CLK4-210ENST00000522136 DAP3P51398 398 aaKnown RBP11.89□□□□□ -0.51
CLK4-210ENST00000522136 SLC16A1P53985 500 aa11.89□□□□□ -0.51
CLK4-210ENST00000522136 CDK5R2Q13319 367 aa11.89□□□□□ -0.51
CLK4-210ENST00000522136 SMN1Q16637 294 aaKnown RBP11.89□□□□□ -0.51
CLK4-210ENST00000522136 LAIR2Q6ISS4 152 aa11.89□□□□□ -0.51
CLK4-210ENST00000522136 PLBD1Q6P4A8 553 aa11.89□□□□□ -0.51
CLK4-210ENST00000522136 LEG1Q6P5S2 330 aa11.89□□□□□ -0.51
CLK4-210ENST00000522136 SEM1Q6ZVN7 128 aa11.89□□□□□ -0.51
CLK4-210ENST00000522136 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.89□□□□□ -0.51
CLK4-210ENST00000522136 JAZF1Q86VZ6 243 aa11.89□□□□□ -0.51
CLK4-210ENST00000522136 DOLPP1Q86YN1 238 aa11.89□□□□□ -0.51
CLK4-210ENST00000522136 MCEMP1Q8IX19 187 aa11.89□□□□□ -0.51
CLK4-210ENST00000522136 C9orf106Q8NAJ2 232 aa11.89□□□□□ -0.51
CLK4-210ENST00000522136 BBS1Q8NFJ9 593 aa11.89□□□□□ -0.51
CLK4-210ENST00000522136 OR8J1Q8NGP2 316 aa11.89□□□□□ -0.51
CLK4-210ENST00000522136 TMEM163Q8TC26 289 aa11.89□□□□□ -0.51
CLK4-210ENST00000522136 PTP4A1Q93096 173 aa11.89□□□□□ -0.51
CLK4-210ENST00000522136 DDOQ99489 341 aa11.89□□□□□ -0.51
CLK4-210ENST00000522136 CALHM2Q9HA72 323 aa11.89□□□□□ -0.51
CLK4-210ENST00000522136 DNAJC27Q9NZQ0 273 aa11.89□□□□□ -0.51
CLK4-210ENST00000522136 KLHL9Q9P2J3 617 aa11.89□□□□□ -0.51
CLK4-210ENST00000522136 SH3BGRL2Q9UJC5 107 aa11.89□□□□□ -0.51
CLK4-210ENST00000522136 TINAGQ9UJW2 476 aa11.89□□□□□ -0.51
CLK4-210ENST00000522136 ZNF835Q9Y2P0 537 aa11.89□□□□□ -0.51
CLK4-210ENST00000522136 FAM215AQ9Y5M1 114 aa11.89□□□□□ -0.51
CLK4-210ENST00000522136 IGSF10Q6WRI0 2623 aa11.89□□□□□ -0.51
CLK4-210ENST00000522136 IGKV3D-15A0A087WSY6 115 aa11.88□□□□□ -0.51
CLK4-210ENST00000522136 NPIPB13A6NJU9 1138 aa11.88□□□□□ -0.51
CLK4-210ENST00000522136 NPIPB4C9JG80 1138 aa11.88□□□□□ -0.51
CLK4-210ENST00000522136 WBP4O75554 376 aaKnown RBP11.88□□□□□ -0.51
CLK4-210ENST00000522136 FMO3P31513 532 aa11.88□□□□□ -0.51
CLK4-210ENST00000522136 SELENOPP49908 381 aa11.88□□□□□ -0.51
CLK4-210ENST00000522136 SNRPGP62308 76 aaKnown RBP11.88□□□□□ -0.51
CLK4-210ENST00000522136 PDK3Q15120 406 aa11.88□□□□□ -0.51
CLK4-210ENST00000522136 NSUN5P2Q63ZY6 315 aa11.88□□□□□ -0.51
CLK4-210ENST00000522136 NIPAL3Q6P499 406 aa11.88□□□□□ -0.51
CLK4-210ENST00000522136 GCNT2Q8N0V5 402 aa11.88□□□□□ -0.51
CLK4-210ENST00000522136 MARVELD2Q8N4S9 558 aa11.88□□□□□ -0.51
CLK4-210ENST00000522136 OR9Q1Q8NGQ5 310 aa11.88□□□□□ -0.51
CLK4-210ENST00000522136 FBLIM1Q8WUP2 373 aa11.88□□□□□ -0.51
CLK4-210ENST00000522136 LRR1Q96L50 414 aa11.88□□□□□ -0.51
CLK4-210ENST00000522136 TSSK2Q96PF2 358 aa11.88□□□□□ -0.51
CLK4-210ENST00000522136 PRRG3Q9BZD7 231 aa11.88□□□□□ -0.51
CLK4-210ENST00000522136 RNF122Q9H9V4 155 aa11.88□□□□□ -0.51
CLK4-210ENST00000522136 KLHL21Q9UJP4 597 aa11.88□□□□□ -0.51
CLK4-210ENST00000522136 PHF3Q92576 2039 aaKnown RBP11.88□□□□□ -0.51
CLK4-210ENST00000522136 ZNF726A6NNF4 738 aa11.88□□□□□ -0.51
CLK4-210ENST00000522136 XKRYO14609 159 aa11.88□□□□□ -0.51
CLK4-210ENST00000522136 PRRG2O14669 202 aa11.88□□□□□ -0.51
CLK4-210ENST00000522136 WDR1O75083 606 aa11.88□□□□□ -0.51
CLK4-210ENST00000522136 ENTPD6O75354 484 aa11.88□□□□□ -0.51
CLK4-210ENST00000522136 IFNGP01579 166 aa11.88□□□□□ -0.51
CLK4-210ENST00000522136 GYPBP06028 91 aa11.88□□□□□ -0.51
CLK4-210ENST00000522136 GABRA1P14867 456 aa11.88□□□□□ -0.51
CLK4-210ENST00000522136 ZNF3P17036 446 aa11.88□□□□□ -0.51
CLK4-210ENST00000522136 EDNRAP25101 427 aa11.88□□□□□ -0.51
CLK4-210ENST00000522136 ACVR2AP27037 513 aa11.88□□□□□ -0.51
CLK4-210ENST00000522136 LGALS3BPQ08380 585 aa11.88□□□□□ -0.51
CLK4-210ENST00000522136 RNPS1Q15287 305 aaKnown RBP11.88□□□□□ -0.51
CLK4-210ENST00000522136 C1orf185Q5T7R7 199 aa11.88□□□□□ -0.51
CLK4-210ENST00000522136 KRT80Q6KB66 452 aa11.88□□□□□ -0.51
CLK4-210ENST00000522136 CXXC5Q7LFL8 322 aaKnown RBP11.88□□□□□ -0.51
CLK4-210ENST00000522136 NUFIP2Q7Z417 695 aaKnown RBP11.88□□□□□ -0.51
CLK4-210ENST00000522136 FAM26EQ8N5C1 309 aa11.88□□□□□ -0.51
CLK4-210ENST00000522136 OR6X1Q8NH79 312 aa11.88□□□□□ -0.51
CLK4-210ENST00000522136 TRUB1Q8WWH5 349 aaKnown RBP11.88□□□□□ -0.51
CLK4-210ENST00000522136 WNT2BQ93097 391 aa11.88□□□□□ -0.51
CLK4-210ENST00000522136 OR2M2Q96R28 347 aa11.88□□□□□ -0.51
CLK4-210ENST00000522136 SYT4Q9H2B2 425 aa11.88□□□□□ -0.51
CLK4-210ENST00000522136 RPRD1BQ9NQG5 326 aaKnown RBP11.88□□□□□ -0.51
CLK4-210ENST00000522136 HSPE1-MOB4S4R3N1 261 aa11.88□□□□□ -0.51
CLK4-210ENST00000522136 NBASA2RRP1 2371 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms