RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 TRAV26-1A0A087WT03 109 aa3.23□□□□□ -1.89
SKP1-208ENST00000521216 NMT2O60551 498 aa3.23□□□□□ -1.89
SKP1-208ENST00000521216 RHOXF2BP0C7M4 288 aa3.23□□□□□ -1.89
SKP1-208ENST00000521216 SLC2A5P22732 501 aa3.23□□□□□ -1.89
SKP1-208ENST00000521216 EPS15P42566 896 aa3.23□□□□□ -1.89
SKP1-208ENST00000521216 RANBP1P43487 201 aa3.23□□□□□ -1.89
SKP1-208ENST00000521216 CCT3P49368 545 aaKnown RBP3.23□□□□□ -1.89
SKP1-208ENST00000521216 DUSP3P51452 185 aaPredicted RBP3.23□□□□□ -1.89
SKP1-208ENST00000521216 SUCLG1P53597 346 aaKnown RBP3.23□□□□□ -1.89
SKP1-208ENST00000521216 REG3AQ06141 175 aa3.23□□□□□ -1.89
SKP1-208ENST00000521216 OR5I1Q13606 314 aa3.23□□□□□ -1.89
SKP1-208ENST00000521216 PTCH1Q13635 1447 aa3.23□□□□□ -1.89
SKP1-208ENST00000521216 KIAA0087Q14695 138 aa3.23□□□□□ -1.89
SKP1-208ENST00000521216 PDK3Q15120 406 aa3.23□□□□□ -1.89
SKP1-208ENST00000521216 TFDP3Q5H9I0 405 aa3.23□□□□□ -1.89
SKP1-208ENST00000521216 CCDC183Q5T5S1 534 aa3.23□□□□□ -1.89
SKP1-208ENST00000521216 C1orf94Q6P1W5 598 aa3.23□□□□□ -1.89
SKP1-208ENST00000521216 C6orf120Q7Z4R8 191 aa3.23□□□□□ -1.89
SKP1-208ENST00000521216 PLA2G4DQ86XP0 818 aa3.23□□□□□ -1.89
SKP1-208ENST00000521216 RNF10Q8N5U6 811 aaKnown RBP3.23□□□□□ -1.89
SKP1-208ENST00000521216 TRIML2Q8N7C3 387 aa3.23□□□□□ -1.89
SKP1-208ENST00000521216 FAM133AQ8N9E0 248 aa3.23□□□□□ -1.89
SKP1-208ENST00000521216 DUSP18Q8NEJ0 188 aa3.23□□□□□ -1.89
SKP1-208ENST00000521216 STEAP2Q8NFT2 490 aa3.23□□□□□ -1.89
SKP1-208ENST00000521216 NPBQ8NG41 125 aa3.23□□□□□ -1.89
SKP1-208ENST00000521216 MAGEE2Q8TD90 523 aaPredicted RBP3.23□□□□□ -1.89
SKP1-208ENST00000521216 DTX3LQ8TDB6 740 aa3.23□□□□□ -1.89
SKP1-208ENST00000521216 SCFD1Q8WVM8 642 aa3.23□□□□□ -1.89
SKP1-208ENST00000521216 SNF8Q96H20 258 aa3.23□□□□□ -1.89
SKP1-208ENST00000521216 FAM210BQ96KR6 192 aa3.23□□□□□ -1.89
SKP1-208ENST00000521216 RHOXF2Q9BQY4 288 aa3.23□□□□□ -1.89
SKP1-208ENST00000521216 TMEM43Q9BTV4 400 aa3.23□□□□□ -1.89
SKP1-208ENST00000521216 NSRP1Q9H0G5 558 aaKnown RBP3.23□□□□□ -1.89
SKP1-208ENST00000521216 VCXQ9H320 206 aa3.23□□□□□ -1.89
SKP1-208ENST00000521216 SRMSQ9H3Y6 488 aa3.23□□□□□ -1.89
SKP1-208ENST00000521216 PATZ1Q9HBE1 687 aaKnown RBP3.23□□□□□ -1.89
SKP1-208ENST00000521216 FKBP14Q9NWM8 211 aa3.23□□□□□ -1.89
SKP1-208ENST00000521216 CLCF1Q9UBD9 225 aa3.23□□□□□ -1.89
SKP1-208ENST00000521216 GNPTGQ9UJJ9 305 aa3.23□□□□□ -1.89
SKP1-208ENST00000521216 CLEC4AQ9UMR7 237 aa3.23□□□□□ -1.89
SKP1-208ENST00000521216 NCOA3Q9Y6Q9 1424 aa3.23□□□□□ -1.89
SKP1-208ENST00000521216 CCNB3Q8WWL7 1395 aa3.23□□□□□ -1.89
SKP1-208ENST00000521216 CECR2Q9BXF3 1484 aa3.22□□□□□ -1.89
SKP1-208ENST00000521216 SYNJ2BP-COX16A0A087WUM0 186 aa3.22□□□□□ -1.89
SKP1-208ENST00000521216 ERICH2A1L162 156 aa3.22□□□□□ -1.89
SKP1-208ENST00000521216 OR5B21A6NL26 309 aa3.22□□□□□ -1.89
SKP1-208ENST00000521216 C12orf71A8MTZ7 269 aa3.22□□□□□ -1.89
SKP1-208ENST00000521216 GPR89AB7ZAQ6 455 aa3.22□□□□□ -1.89
SKP1-208ENST00000521216 C12orf77C9JDV5 145 aa3.22□□□□□ -1.89
SKP1-208ENST00000521216 C11orf94C9JXX5 98 aa3.22□□□□□ -1.89
SKP1-208ENST00000521216 NDUFAB1O14561 156 aa3.22□□□□□ -1.89
SKP1-208ENST00000521216 BIRC5O15392 142 aa3.22□□□□□ -1.89
SKP1-208ENST00000521216 RIPK2O43353 540 aa3.22□□□□□ -1.89
SKP1-208ENST00000521216 ALDOBP05062 364 aa3.22□□□□□ -1.89
SKP1-208ENST00000521216 PLEKP08567 350 aaPredicted RBP3.22□□□□□ -1.89
SKP1-208ENST00000521216 GPR89BP0CG08 455 aa3.22□□□□□ -1.89
SKP1-208ENST00000521216 TBPP20226 339 aa3.22□□□□□ -1.89
SKP1-208ENST00000521216 S100A1P23297 94 aa3.22□□□□□ -1.89
SKP1-208ENST00000521216 NMUP48645 174 aa3.22□□□□□ -1.89
SKP1-208ENST00000521216 HERVK_113P61574 105 aa3.22□□□□□ -1.89
SKP1-208ENST00000521216 CDK16Q00536 496 aa3.22□□□□□ -1.89
SKP1-208ENST00000521216 ACVR1Q04771 509 aa3.22□□□□□ -1.89
SKP1-208ENST00000521216 SPCS2Q15005 226 aa3.22□□□□□ -1.89
SKP1-208ENST00000521216 RFX4Q33E94 735 aa3.22□□□□□ -1.89
SKP1-208ENST00000521216 CCDC153Q494R4 210 aa3.22□□□□□ -1.89
SKP1-208ENST00000521216 SMUG1Q53HV7 270 aa3.22□□□□□ -1.89
SKP1-208ENST00000521216 PIGGQ5H8A4 983 aa3.22□□□□□ -1.89
SKP1-208ENST00000521216 TSPO2Q5TGU0 170 aa3.22□□□□□ -1.89
SKP1-208ENST00000521216 LCN12Q6JVE5 192 aa3.22□□□□□ -1.89
SKP1-208ENST00000521216 LRRC31Q6UY01 552 aa3.22□□□□□ -1.89
SKP1-208ENST00000521216 LINC01551Q86U37 167 aa3.22□□□□□ -1.89
SKP1-208ENST00000521216 NUDCD3Q8IVD9 361 aa3.22□□□□□ -1.89
SKP1-208ENST00000521216 OR52M1Q8NGK5 317 aa3.22□□□□□ -1.89
SKP1-208ENST00000521216 OR5D13Q8NGL4 314 aa3.22□□□□□ -1.89
SKP1-208ENST00000521216 ACOT11Q8WXI4 607 aaPredicted RBP3.22□□□□□ -1.89
SKP1-208ENST00000521216 C10orf35Q96D05 121 aa3.22□□□□□ -1.89
SKP1-208ENST00000521216 COQ2Q96H96 371 aa3.22□□□□□ -1.89
SKP1-208ENST00000521216 ZNF641Q96N77 438 aaPredicted RBP3.22□□□□□ -1.89
SKP1-208ENST00000521216 RIOK1Q9BRS2 568 aaKnown RBP3.22□□□□□ -1.89
SKP1-208ENST00000521216 TMEM165Q9HC07 324 aa3.22□□□□□ -1.89
SKP1-208ENST00000521216 GLRX2Q9NS18 164 aa3.22□□□□□ -1.89
SKP1-208ENST00000521216 STOX2Q9P2F5 926 aaPredicted RBP3.22□□□□□ -1.89
SKP1-208ENST00000521216 ATPIF1Q9UII2 106 aa3.22□□□□□ -1.89
SKP1-208ENST00000521216 ADAM28Q9UKQ2 775 aa3.22□□□□□ -1.89
SKP1-208ENST00000521216 ERICH3Q5RHP9 1530 aa3.21□□□□□ -1.9
SKP1-208ENST00000521216 IGHV3-64DA0A0J9YX35 117 aa3.21□□□□□ -1.9
SKP1-208ENST00000521216 PCP4L1A6NKN8 68 aa3.21□□□□□ -1.9
SKP1-208ENST00000521216 GOLGA8SH3BPF8 625 aa3.21□□□□□ -1.9
SKP1-208ENST00000521216 NBR2O15453 112 aa3.21□□□□□ -1.9
SKP1-208ENST00000521216 SNAI2O43623 268 aa3.21□□□□□ -1.9
SKP1-208ENST00000521216 SULT1B1O43704 296 aa3.21□□□□□ -1.9
SKP1-208ENST00000521216 ADRB3P13945 408 aa3.21□□□□□ -1.9
SKP1-208ENST00000521216 CNR1P21554 472 aa3.21□□□□□ -1.9
SKP1-208ENST00000521216 GLRA2P23416 452 aa3.21□□□□□ -1.9
SKP1-208ENST00000521216 HOXA9P31269 272 aa3.21□□□□□ -1.9
SKP1-208ENST00000521216 PAX5Q02548 391 aa3.21□□□□□ -1.9
SKP1-208ENST00000521216 WDR43Q15061 677 aaKnown RBP eCLIP3.21□□□□□ -1.9
SKP1-208ENST00000521216 PTGES3Q15185 160 aaKnown RBP3.21□□□□□ -1.9
SKP1-208ENST00000521216 ANKDD1AQ495B1 522 aa3.21□□□□□ -1.9
SKP1-208ENST00000521216 UQCC3Q6UW78 93 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms