RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 SLC17A1Q14916 467 aa11.24□□□□□ -0.61
ERGIC1-208ENST00000520399 ZNF691Q5VV52 312 aa11.24□□□□□ -0.61
ERGIC1-208ENST00000520399 AFMIDQ63HM1 303 aa11.24□□□□□ -0.61
ERGIC1-208ENST00000520399 MKXQ8IYA7 352 aa11.24□□□□□ -0.61
ERGIC1-208ENST00000520399 IL17RDQ8NFM7 739 aa11.24□□□□□ -0.61
ERGIC1-208ENST00000520399 ZNF596Q8TC21 504 aa11.24□□□□□ -0.61
ERGIC1-208ENST00000520399 EXTL1Q92935 676 aa11.24□□□□□ -0.61
ERGIC1-208ENST00000520399 NUDT9Q9BW91 350 aa11.24□□□□□ -0.61
ERGIC1-208ENST00000520399 USP36Q9P275 1121 aaKnown RBP11.24□□□□□ -0.61
ERGIC1-208ENST00000520399 NDUFS8O00217 210 aa11.24□□□□□ -0.61
ERGIC1-208ENST00000520399 PPP6CO00743 305 aa11.24□□□□□ -0.61
ERGIC1-208ENST00000520399 DBHP09172 617 aa11.24□□□□□ -0.61
ERGIC1-208ENST00000520399 PSMB5P28074 263 aa11.24□□□□□ -0.61
ERGIC1-208ENST00000520399 CSN1S1P47710 185 aa11.24□□□□□ -0.61
ERGIC1-208ENST00000520399 UQCC3Q6UW78 93 aa11.24□□□□□ -0.61
ERGIC1-208ENST00000520399 RNF175Q8N4F7 328 aa11.24□□□□□ -0.61
ERGIC1-208ENST00000520399 B3GNT7Q8NFL0 401 aa11.24□□□□□ -0.61
ERGIC1-208ENST00000520399 SEMA4CQ9C0C4 833 aa11.24□□□□□ -0.61
ERGIC1-208ENST00000520399 OSGIN2Q9Y236 505 aa11.24□□□□□ -0.61
ERGIC1-208ENST00000520399 IER3IP1Q9Y5U9 82 aa11.24□□□□□ -0.61
ERGIC1-208ENST00000520399 SLC9B1P1A6NJY1 282 aa11.23□□□□□ -0.61
ERGIC1-208ENST00000520399 CTDSP2O14595 271 aa11.23□□□□□ -0.61
ERGIC1-208ENST00000520399 GPR39O43194 453 aa11.23□□□□□ -0.61
ERGIC1-208ENST00000520399 DEFA4P12838 97 aa11.23□□□□□ -0.61
ERGIC1-208ENST00000520399 ZNF44P15621 663 aa11.23□□□□□ -0.61
ERGIC1-208ENST00000520399 GABRB3P28472 473 aa11.23□□□□□ -0.61
ERGIC1-208ENST00000520399 KLHDC8BQ8IXV7 354 aa11.23□□□□□ -0.61
ERGIC1-208ENST00000520399 ELF4Q99607 663 aaPredicted RBP11.23□□□□□ -0.61
ERGIC1-208ENST00000520399 C1QTNF2Q9BXJ5 285 aa11.23□□□□□ -0.61
ERGIC1-208ENST00000520399 OR2M5A3KFT3 312 aa11.23□□□□□ -0.61
ERGIC1-208ENST00000520399 ALDOCP09972 364 aaKnown RBP11.23□□□□□ -0.61
ERGIC1-208ENST00000520399 ARNTP27540 789 aa11.23□□□□□ -0.61
ERGIC1-208ENST00000520399 SGSHP51688 502 aa11.23□□□□□ -0.61
ERGIC1-208ENST00000520399 RAB40BQ12829 278 aa11.23□□□□□ -0.61
ERGIC1-208ENST00000520399 ZNF124Q15973 351 aa11.23□□□□□ -0.61
ERGIC1-208ENST00000520399 MOB3CQ70IA8 216 aa11.23□□□□□ -0.61
ERGIC1-208ENST00000520399 MIB2Q96AX9 1013 aa11.23□□□□□ -0.61
ERGIC1-208ENST00000520399 PTDSS2Q9BVG9 487 aa11.23□□□□□ -0.61
ERGIC1-208ENST00000520399 ENKD1Q9H0I2 346 aa11.23□□□□□ -0.61
ERGIC1-208ENST00000520399 PLSCR3Q9NRY6 295 aa11.23□□□□□ -0.61
ERGIC1-208ENST00000520399 ADAM29Q9UKF5 820 aa11.23□□□□□ -0.61
ERGIC1-208ENST00000520399 SURF4O15260 269 aa11.23□□□□□ -0.61
ERGIC1-208ENST00000520399 ACSM4P0C7M7 580 aa11.23□□□□□ -0.61
ERGIC1-208ENST00000520399 ABOP16442 354 aa11.23□□□□□ -0.61
ERGIC1-208ENST00000520399 PTBP1P26599 531 aaKnown RBP eCLIP11.23□□□□□ -0.61
ERGIC1-208ENST00000520399 RPE65Q16518 533 aa11.23□□□□□ -0.61
ERGIC1-208ENST00000520399 ZNF74Q16587 644 aa11.23□□□□□ -0.61
ERGIC1-208ENST00000520399 FAM78AQ5JUQ0 283 aa11.23□□□□□ -0.61
ERGIC1-208ENST00000520399 ENTPD8Q5MY95 495 aa11.23□□□□□ -0.61
ERGIC1-208ENST00000520399 FBXL6Q8N531 539 aa11.23□□□□□ -0.61
ERGIC1-208ENST00000520399 SDR9C7Q8NEX9 313 aa11.23□□□□□ -0.61
ERGIC1-208ENST00000520399 ZNF417Q8TAU3 575 aa11.23□□□□□ -0.61
ERGIC1-208ENST00000520399 ZMYND19Q96E35 227 aaPredicted RBP11.23□□□□□ -0.61
ERGIC1-208ENST00000520399 ARSGQ96EG1 525 aa11.23□□□□□ -0.61
ERGIC1-208ENST00000520399 GALNT9Q9HCQ5 603 aa11.23□□□□□ -0.61
ERGIC1-208ENST00000520399 AKIP1Q9NQ31 210 aa11.23□□□□□ -0.61
ERGIC1-208ENST00000520399 CBLCQ9ULV8 474 aa11.23□□□□□ -0.61
ERGIC1-208ENST00000520399 C7orf72A4D263 438 aa11.23□□□□□ -0.61
ERGIC1-208ENST00000520399 HIDE1A8MVS5 230 aa11.23□□□□□ -0.61
ERGIC1-208ENST00000520399 FAM171A2A8MVW0 826 aa11.23□□□□□ -0.61
ERGIC1-208ENST00000520399 NQO2P16083 231 aa11.23□□□□□ -0.61
ERGIC1-208ENST00000520399 POU3F2P20265 443 aaPredicted RBP11.23□□□□□ -0.61
ERGIC1-208ENST00000520399 GIFP27352 417 aa11.23□□□□□ -0.61
ERGIC1-208ENST00000520399 PCBD1P61457 104 aa11.23□□□□□ -0.61
ERGIC1-208ENST00000520399 CRMP1Q14194 572 aa11.23□□□□□ -0.61
ERGIC1-208ENST00000520399 PRAMEF8Q5VWM4 474 aa11.23□□□□□ -0.61
ERGIC1-208ENST00000520399 PRAMEF7Q5VXH5 474 aa11.23□□□□□ -0.61
ERGIC1-208ENST00000520399 B3GNT8Q7Z7M8 397 aa11.23□□□□□ -0.61
ERGIC1-208ENST00000520399 SUMF1Q8NBK3 374 aa11.23□□□□□ -0.61
ERGIC1-208ENST00000520399 TMEM163Q8TC26 289 aa11.23□□□□□ -0.61
ERGIC1-208ENST00000520399 M1APQ8TC57 530 aa11.23□□□□□ -0.61
ERGIC1-208ENST00000520399 SFT2D1Q8WV19 159 aa11.23□□□□□ -0.61
ERGIC1-208ENST00000520399 APH1AQ96BI3 265 aa11.23□□□□□ -0.61
ERGIC1-208ENST00000520399 CMTM3Q96MX0 182 aa11.23□□□□□ -0.61
ERGIC1-208ENST00000520399 OR5B2Q96R09 309 aa11.23□□□□□ -0.61
ERGIC1-208ENST00000520399 NXF5Q9H1B4 397 aaKnown RBP11.23□□□□□ -0.61
ERGIC1-208ENST00000520399 ISYNA1Q9NPH2 558 aa11.23□□□□□ -0.61
ERGIC1-208ENST00000520399 YTHDF2Q9Y5A9 579 aaKnown RBP11.23□□□□□ -0.61
ERGIC1-208ENST00000520399 SMLR1H3BR10 107 aa11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 AHRP35869 848 aa11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 MGAT3Q09327 533 aa11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 CLEC14AQ86T13 490 aa11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 C1orf87Q8N0U7 546 aa11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 SLC30A7Q8NEW0 376 aa11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 LINC01599Q8WXQ3 324 aa11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 TMEM18Q96B42 140 aa11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 THSD1Q9NS62 852 aa11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 CSNK1G3Q9Y6M4 447 aa11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 F5H5K5 113 aa11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 FRS3O43559 492 aa11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 RAD1O60671 282 aa11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 CPMP14384 443 aa11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 HIST1H1TP22492 207 aaPredicted RBP11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 UBE2NLQ5JXB2 153 aa11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 AADACL3Q5VUY0 350 aa11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 LYSMD4Q5XG99 296 aa11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 VRK2Q86Y07 508 aa11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 PSMF1Q92530 271 aa11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 MUCL1Q96DR8 90 aa11.22□□□□□ -0.61
ERGIC1-208ENST00000520399 MOGAT1Q96PD6 335 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms