RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 HTR2BP41595 481 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 ATP5OP48047 213 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 MRPL19P49406 292 aaKnown RBP2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 GSK3BP49841 420 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 NUDT2P50583 147 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 UGT2B15P54855 530 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 CDH6P55285 790 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 PSME3P61289 254 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 TFAMQ00059 246 aaKnown RBP2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 ZFP36L1Q07352 338 aaKnown RBP2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 HEPACAMQ14CZ8 416 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 PAFAH1B3Q15102 231 aaKnown RBP2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 NEDD8Q15843 81 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 PPP1R3AQ16821 1122 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 LRRC26Q2I0M4 334 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 HKDC1Q2TB90 917 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 DCAF4L1Q3SXM0 396 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 HSDL1Q3SXM5 330 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 SLC25A52Q3SY17 297 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 PYCR3Q53H96 274 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 VWA2Q5GFL6 755 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 PAGE2BQ5JRK9 111 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 RBM48Q5RL73 367 aaKnown RBP2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 MARCH8Q5T0T0 291 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 DDI2Q5TDH0 399 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 SEL1L3Q68CR1 1132 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 SPINK14Q6IE38 97 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 OR6B2Q6IFH4 312 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 FAM45BPQ6NSW5 357 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 XKRXQ6PP77 449 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 TBPL2Q6SJ96 375 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 ZCCHC23Q6ZST2 131 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 GALNT10Q86SR1 603 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 TMEM135Q86UB9 458 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 ERO1BQ86YB8 467 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 PLCZ1Q86YW0 608 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 NKAIN4Q8IVV8 208 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 CDKL3Q8IVW4 592 aaPredicted RBP2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 RIMKLAQ8IXN7 391 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 RDH10Q8IZV5 341 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 SLC39A11Q8N1S5 342 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 ZCCHC7Q8N3Z6 543 aaKnown RBP2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 FGFRL1Q8N441 504 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 FAM83FQ8NEG4 500 aaPredicted RBP2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 ZNF680Q8NEM1 530 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 PPTC7Q8NI37 304 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 FAM45AQ8TCE6 357 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 SETD7Q8WTS6 366 aaKnown RBP2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 UBTD2Q8WUN7 234 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 CANT1Q8WVQ1 401 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 ARNTL2Q8WYA1 636 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 GTF2H4Q92759 462 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 YIPF5Q969M3 257 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 FAM46BQ96A09 425 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 C5orf30Q96GV9 206 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 PCED1BQ96HM7 432 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 C1orf147Q96MC9 270 aaPredicted RBP2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 GPR137Q96N19 417 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 RDH12Q96NR8 316 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 QKIQ96PU8 341 aaKnown RBP eCLIP2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 MBOAT4Q96T53 435 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 VAT1Q99536 393 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 C9orf16Q9BUW7 83 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 ACAT2Q9BWD1 397 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 CHID1Q9BWS9 393 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 REG4Q9BYZ8 158 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 EFCAB1Q9HAE3 211 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 FARSBQ9NSD9 589 aaKnown RBP2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 PAQR5Q9NXK6 330 aaPredicted RBP2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 SMPD3Q9NY59 655 aaPredicted RBP2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 COA4Q9NYJ1 87 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 USE1Q9NZ43 259 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 MAT2BQ9NZL9 334 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 ACTR3BQ9P1U1 418 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 KLHL21Q9UJP4 597 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 ZNF221Q9UK13 617 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 SCML1Q9UN30 329 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 HSPE1-MOB4S4R3N1 261 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 DENND4AQ7Z401 1863 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 MYLKQ15746 1914 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 SHROOM3Q8TF72 1996 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 GBF1Q92538 1859 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 TRAV6A0A075B6T7 132 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 MBLAC1A4D2B0 266 aaPredicted RBP2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 RPL37AP8A6NKH3 93 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 CLDN24A6NM45 220 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 TRPC5OSA6NMA1 111 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 CENPXA8MT69 81 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 RNF212BA8MTL3 300 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 GOLGA8SH3BPF8 625 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 M0QYV0 167 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 EEF2KO00418 725 aaKnown RBP2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 NME4O00746 187 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 SDHDO14521 159 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 ABCD4O14678 606 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 CHEK1O14757 476 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 AIM2O14862 343 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 RAD51BO15315 384 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 B4GALT5O43286 388 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms