RNA–Protein interactions for RNA: ENST00000519664.1

SYNPO-204, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNPO, Length 4,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-204ENST00000519664 LINC00615Q96LM1 132 aaPredicted RBP10.75□□□□□ -0.69
SYNPO-204ENST00000519664 LRRC3BQ96PB8 259 aa10.75□□□□□ -0.69
SYNPO-204ENST00000519664 ZNF587Q96SQ5 575 aaPredicted RBP10.75□□□□□ -0.69
SYNPO-204ENST00000519664 TCEAL7Q9BRU2 100 aa10.75□□□□□ -0.69
SYNPO-204ENST00000519664 TSPAN10Q9H1Z9 355 aaPredicted RBP10.75□□□□□ -0.69
SYNPO-204ENST00000519664 BCL2L10Q9HD36 194 aa10.75□□□□□ -0.69
SYNPO-204ENST00000519664 SLC22A7Q9Y694 548 aa10.75□□□□□ -0.69
SYNPO-204ENST00000519664 NRXN2Q9P2S2 1712 aa10.75□□□□□ -0.69
SYNPO-204ENST00000519664 FAM230AA0A1W2PPH8 454 aa10.75□□□□□ -0.69
SYNPO-204ENST00000519664 BCAT2O15382 392 aaPredicted RBP10.75□□□□□ -0.69
SYNPO-204ENST00000519664 GALR3O60755 368 aaPredicted RBP10.75□□□□□ -0.69
SYNPO-204ENST00000519664 UBL3O95164 117 aa10.75□□□□□ -0.69
SYNPO-204ENST00000519664 WISP3O95389 354 aaPredicted RBP10.75□□□□□ -0.69
SYNPO-204ENST00000519664 P04436 131 aa10.75□□□□□ -0.69
SYNPO-204ENST00000519664 CSF3P09919 207 aa10.75□□□□□ -0.69
SYNPO-204ENST00000519664 PIPP12273 146 aaPredicted RBP10.75□□□□□ -0.69
SYNPO-204ENST00000519664 ZNF14P17017 642 aaPredicted RBP10.75□□□□□ -0.69
SYNPO-204ENST00000519664 RBMS1P29558 406 aaKnown RBP10.75□□□□□ -0.69
SYNPO-204ENST00000519664 PER3P56645 1201 aa10.75□□□□□ -0.69
SYNPO-204ENST00000519664 ZNF616Q08AN1 781 aa10.75□□□□□ -0.69
SYNPO-204ENST00000519664 SRSF5Q13243 272 aaKnown RBP10.75□□□□□ -0.69
SYNPO-204ENST00000519664 CCINQ13939 588 aa10.75□□□□□ -0.69
SYNPO-204ENST00000519664 ARHGAP11BQ3KRB8 267 aa10.75□□□□□ -0.69
SYNPO-204ENST00000519664 Q499Y3 187 aa10.75□□□□□ -0.69
SYNPO-204ENST00000519664 TOR2AQ5JU69 321 aa10.75□□□□□ -0.69
SYNPO-204ENST00000519664 C3P1Q6ZMU1 363 aa10.75□□□□□ -0.69
SYNPO-204ENST00000519664 Q6ZS52 159 aa10.75□□□□□ -0.69
SYNPO-204ENST00000519664 KLHDC8BQ8IXV7 354 aa10.75□□□□□ -0.69
SYNPO-204ENST00000519664 OR5M1Q8NGP8 315 aa10.75□□□□□ -0.69
SYNPO-204ENST00000519664 OR5H2Q8NGV7 314 aa10.75□□□□□ -0.69
SYNPO-204ENST00000519664 MRPL38Q96DV4 380 aaKnown RBP10.75□□□□□ -0.69
SYNPO-204ENST00000519664 BMFQ96LC9 184 aa10.75□□□□□ -0.69
SYNPO-204ENST00000519664 PLA2G2FQ9BZM2 168 aa10.75□□□□□ -0.69
SYNPO-204ENST00000519664 B3GALT1Q9Y5Z6 326 aa10.75□□□□□ -0.69
SYNPO-204ENST00000519664 AKAP6Q13023 2319 aa10.75□□□□□ -0.69
SYNPO-204ENST00000519664 M0QYG6 137 aa10.75□□□□□ -0.69
SYNPO-204ENST00000519664 PEX14O75381 377 aa10.75□□□□□ -0.69
SYNPO-204ENST00000519664 RAD51DO75771 328 aa10.75□□□□□ -0.69
SYNPO-204ENST00000519664 AKAIN1P0CW23 69 aa10.75□□□□□ -0.69
SYNPO-204ENST00000519664 TSFMP43897 325 aaKnown RBP10.75□□□□□ -0.69
SYNPO-204ENST00000519664 MRPL19P49406 292 aaKnown RBP10.75□□□□□ -0.69
SYNPO-204ENST00000519664 RAB2AP61019 212 aa10.75□□□□□ -0.69
SYNPO-204ENST00000519664 MFSD13AQ14CX5 517 aa10.75□□□□□ -0.69
SYNPO-204ENST00000519664 GLYATL3Q5SZD4 288 aa10.75□□□□□ -0.69
SYNPO-204ENST00000519664 PAPD4Q6PIY7 484 aaKnown RBP10.75□□□□□ -0.69
SYNPO-204ENST00000519664 SSX6Q7RTT6 188 aa10.75□□□□□ -0.69
SYNPO-204ENST00000519664 IL17RDQ8NFM7 739 aa10.75□□□□□ -0.69
SYNPO-204ENST00000519664 RSPRY1Q96DX4 576 aa10.75□□□□□ -0.69
SYNPO-204ENST00000519664 MEPEQ9NQ76 525 aaPredicted RBP10.75□□□□□ -0.69
SYNPO-204ENST00000519664 CMC2Q9NRP2 79 aa10.75□□□□□ -0.69
SYNPO-204ENST00000519664 FBXL4Q9UKA2 621 aa10.75□□□□□ -0.69
SYNPO-204ENST00000519664 TMED7-TICAM2A0A0A6YYA0 188 aa10.74□□□□□ -0.69
SYNPO-204ENST00000519664 CPEP16870 476 aa10.74□□□□□ -0.69
SYNPO-204ENST00000519664 GABRR1P24046 479 aa10.74□□□□□ -0.69
SYNPO-204ENST00000519664 DRD3P35462 400 aa10.74□□□□□ -0.69
SYNPO-204ENST00000519664 SORDQ00796 357 aa10.74□□□□□ -0.69
SYNPO-204ENST00000519664 PLP2Q04941 152 aa10.74□□□□□ -0.69
SYNPO-204ENST00000519664 RIN1Q13671 783 aa10.74□□□□□ -0.69
SYNPO-204ENST00000519664 RSU1Q15404 277 aa10.74□□□□□ -0.69
SYNPO-204ENST00000519664 NIPAL3Q6P499 406 aa10.74□□□□□ -0.69
SYNPO-204ENST00000519664 BEND4Q6ZU67 534 aa10.74□□□□□ -0.69
SYNPO-204ENST00000519664 OR4C15Q8NGM1 316 aa10.74□□□□□ -0.69
SYNPO-204ENST00000519664 STOML3Q8TAV4 291 aa10.74□□□□□ -0.69
SYNPO-204ENST00000519664 KCTD12Q96CX2 325 aaKnown RBP10.74□□□□□ -0.69
SYNPO-204ENST00000519664 PFDN5Q99471 154 aa10.74□□□□□ -0.69
SYNPO-204ENST00000519664 TEX101Q9BY14 249 aa10.74□□□□□ -0.69
SYNPO-204ENST00000519664 C20orf141Q9NUB4 165 aa10.74□□□□□ -0.69
SYNPO-204ENST00000519664 COPS3Q9UNS2 423 aa10.74□□□□□ -0.69
SYNPO-204ENST00000519664 SLC7A11Q9UPY5 501 aa10.74□□□□□ -0.69
SYNPO-204ENST00000519664 TMED7Q9Y3B3 224 aa10.74□□□□□ -0.69
SYNPO-204ENST00000519664 LRRC37AA6NMS7 1700 aa10.74□□□□□ -0.69
SYNPO-204ENST00000519664 SIPA1L1O43166 1804 aa10.74□□□□□ -0.69
SYNPO-204ENST00000519664 DLX5P56178 289 aa10.74□□□□□ -0.69
SYNPO-204ENST00000519664 EEF1A1P68104 462 aaKnown RBP10.74□□□□□ -0.69
SYNPO-204ENST00000519664 MLF2Q15773 248 aaPredicted RBP10.74□□□□□ -0.69
SYNPO-204ENST00000519664 METAP1DQ6UB28 335 aaPredicted RBP10.74□□□□□ -0.69
SYNPO-204ENST00000519664 EID2Q8N6I1 236 aa10.74□□□□□ -0.69
SYNPO-204ENST00000519664 SFXN2Q96NB2 322 aa10.74□□□□□ -0.69
SYNPO-204ENST00000519664 OR6C1Q96RD1 312 aa10.74□□□□□ -0.69
SYNPO-204ENST00000519664 SELENOIQ9C0D9 397 aa10.74□□□□□ -0.69
SYNPO-204ENST00000519664 TRBV5-3A0A0A0MS03 114 aa10.74□□□□□ -0.69
SYNPO-204ENST00000519664 A0A0A6YYD5 115 aa10.74□□□□□ -0.69
SYNPO-204ENST00000519664 P2RY10O00398 339 aa10.74□□□□□ -0.69
SYNPO-204ENST00000519664 DVL2O14641 736 aa10.74□□□□□ -0.69
SYNPO-204ENST00000519664 ZNF749O43361 778 aa10.74□□□□□ -0.69
SYNPO-204ENST00000519664 SCRG1O75711 98 aa10.74□□□□□ -0.69
SYNPO-204ENST00000519664 HLA-AP01891 365 aaKnown RBP10.74□□□□□ -0.69
SYNPO-204ENST00000519664 UBE2MP61081 183 aaKnown RBP10.74□□□□□ -0.69
SYNPO-204ENST00000519664 FLI1Q01543 452 aaPredicted RBP10.74□□□□□ -0.69
SYNPO-204ENST00000519664 CORO6Q6QEF8 472 aa10.74□□□□□ -0.69
SYNPO-204ENST00000519664 GSG1LQ6UXU4 331 aa10.74□□□□□ -0.69
SYNPO-204ENST00000519664 TEX19Q8NA77 164 aa10.74□□□□□ -0.69
SYNPO-204ENST00000519664 CCDC54Q8NEL0 328 aa10.74□□□□□ -0.69
SYNPO-204ENST00000519664 BAHD1Q8TBE0 780 aaPredicted RBP10.74□□□□□ -0.69
SYNPO-204ENST00000519664 RNF170Q96K19 258 aa10.74□□□□□ -0.69
SYNPO-204ENST00000519664 CDCP1Q9H5V8 836 aa10.74□□□□□ -0.69
SYNPO-204ENST00000519664 BRWD3Q6RI45 1802 aa10.74□□□□□ -0.69
SYNPO-204ENST00000519664 MN1Q10571 1320 aaPredicted RBP10.74□□□□□ -0.69
SYNPO-204ENST00000519664 TDRD6O60522 2096 aaKnown RBP10.74□□□□□ -0.69
SYNPO-204ENST00000519664 C1orf196B1AJZ1 125 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms