RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 RIMS4Q9H426 269 aaPredicted RBP10.17□□□□□ -0.78
TRIM41-209ENST00000515834 TBPP20226 339 aa10.17□□□□□ -0.78
TRIM41-209ENST00000515834 RAB40BQ12829 278 aa10.17□□□□□ -0.78
TRIM41-209ENST00000515834 VEZF1Q14119 521 aa10.17□□□□□ -0.78
TRIM41-209ENST00000515834 CCDC71Q8IV32 467 aaPredicted RBP10.17□□□□□ -0.78
TRIM41-209ENST00000515834 FAM71CQ8NEG0 241 aa10.17□□□□□ -0.78
TRIM41-209ENST00000515834 DEFB124Q8NES8 71 aa10.17□□□□□ -0.78
TRIM41-209ENST00000515834 KHSRPQ92945 711 aaKnown RBP eCLIP10.17□□□□□ -0.78
TRIM41-209ENST00000515834 CCDC74BQ96LY2 380 aa10.17□□□□□ -0.78
TRIM41-209ENST00000515834 MRI1Q9BV20 369 aa10.17□□□□□ -0.78
TRIM41-209ENST00000515834 ABHD6Q9BV23 337 aa10.17□□□□□ -0.78
TRIM41-209ENST00000515834 PPA2Q9H2U2 334 aa10.17□□□□□ -0.78
TRIM41-209ENST00000515834 PMS2P1A4D2B8 440 aa10.17□□□□□ -0.78
TRIM41-209ENST00000515834 TNFRSF10AO00220 468 aa10.17□□□□□ -0.78
TRIM41-209ENST00000515834 BCL6P41182 706 aa10.17□□□□□ -0.78
TRIM41-209ENST00000515834 PHLDA2Q53GA4 152 aa10.17□□□□□ -0.78
TRIM41-209ENST00000515834 KCNIP4Q6PIL6 250 aa10.17□□□□□ -0.78
TRIM41-209ENST00000515834 APOOLQ6UXV4 268 aa10.17□□□□□ -0.78
TRIM41-209ENST00000515834 TMEM200AQ86VY9 491 aa10.17□□□□□ -0.78
TRIM41-209ENST00000515834 CCDC28AQ8IWP9 274 aa10.17□□□□□ -0.78
TRIM41-209ENST00000515834 LKAAEAR1Q8TD35 194 aa10.17□□□□□ -0.78
TRIM41-209ENST00000515834 GGHQ92820 318 aa10.17□□□□□ -0.78
TRIM41-209ENST00000515834 PINX1Q96BK5 328 aaKnown RBP10.17□□□□□ -0.78
TRIM41-209ENST00000515834 MFFQ9GZY8 342 aa10.17□□□□□ -0.78
TRIM41-209ENST00000515834 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.17□□□□□ -0.78
TRIM41-209ENST00000515834 DCAF13Q9NV06 445 aaKnown RBP10.17□□□□□ -0.78
TRIM41-209ENST00000515834 MARCH5Q9NX47 278 aa10.17□□□□□ -0.78
TRIM41-209ENST00000515834 OR51B4Q9Y5P0 310 aa10.17□□□□□ -0.78
TRIM41-209ENST00000515834 C1orf196B1AJZ1 125 aa10.17□□□□□ -0.78
TRIM41-209ENST00000515834 K7EQM0 130 aa10.17□□□□□ -0.78
TRIM41-209ENST00000515834 MED6O75586 246 aa10.17□□□□□ -0.78
TRIM41-209ENST00000515834 PIAS2O75928 621 aa10.17□□□□□ -0.78
TRIM41-209ENST00000515834 SNRNP70P08621 437 aaKnown RBP10.17□□□□□ -0.78
TRIM41-209ENST00000515834 SELEP16581 610 aa10.17□□□□□ -0.78
TRIM41-209ENST00000515834 TESK1Q15569 626 aa10.17□□□□□ -0.78
TRIM41-209ENST00000515834 LYPD8Q6UX82 237 aa10.17□□□□□ -0.78
TRIM41-209ENST00000515834 UBALD2Q8IYN6 164 aa10.17□□□□□ -0.78
TRIM41-209ENST00000515834 OR1E3Q8WZA6 343 aa10.17□□□□□ -0.78
TRIM41-209ENST00000515834 SARAFQ96BY9 339 aa10.17□□□□□ -0.78
TRIM41-209ENST00000515834 SARGQ9BW04 601 aa10.17□□□□□ -0.78
TRIM41-209ENST00000515834 NMES1Q9C002 83 aa10.17□□□□□ -0.78
TRIM41-209ENST00000515834 M0QZ24 198 aa10.16□□□□□ -0.78
TRIM41-209ENST00000515834 TNFSF11O14788 317 aa10.16□□□□□ -0.78
TRIM41-209ENST00000515834 FZD7O75084 574 aa10.16□□□□□ -0.78
TRIM41-209ENST00000515834 HLA-DOBP13765 273 aa10.16□□□□□ -0.78
TRIM41-209ENST00000515834 GIFP27352 417 aa10.16□□□□□ -0.78
TRIM41-209ENST00000515834 HLCSP50747 726 aa10.16□□□□□ -0.78
TRIM41-209ENST00000515834 FGFBP1Q14512 234 aa10.16□□□□□ -0.78
TRIM41-209ENST00000515834 DUSP6Q16828 381 aa10.16□□□□□ -0.78
TRIM41-209ENST00000515834 CNTN4Q8IWV2 1026 aa10.16□□□□□ -0.78
TRIM41-209ENST00000515834 BEST4Q8NFU0 473 aa10.16□□□□□ -0.78
TRIM41-209ENST00000515834 NIPAL2Q9H841 368 aa10.16□□□□□ -0.78
TRIM41-209ENST00000515834 PTTG3PQ9NZH4 202 aa10.16□□□□□ -0.78
TRIM41-209ENST00000515834 RGPD8O14715 1765 aaPredicted RBP10.16□□□□□ -0.78
TRIM41-209ENST00000515834 C5orf49A4QMS7 147 aa10.16□□□□□ -0.78
TRIM41-209ENST00000515834 C2CD4DB7Z1M9 353 aa10.16□□□□□ -0.78
TRIM41-209ENST00000515834 CACNG3O60359 315 aa10.16□□□□□ -0.78
TRIM41-209ENST00000515834 CSO75390 466 aaKnown RBP10.16□□□□□ -0.78
TRIM41-209ENST00000515834 IMPA1P29218 277 aa10.16□□□□□ -0.78
TRIM41-209ENST00000515834 MFGE8Q08431 387 aaPredicted RBP10.16□□□□□ -0.78
TRIM41-209ENST00000515834 PRTGQ2VWP7 1150 aa10.16□□□□□ -0.78
TRIM41-209ENST00000515834 PROX2Q3B8N5 592 aa10.16□□□□□ -0.78
TRIM41-209ENST00000515834 TBPL2Q6SJ96 375 aa10.16□□□□□ -0.78
TRIM41-209ENST00000515834 DCXRQ7Z4W1 244 aa10.16□□□□□ -0.78
TRIM41-209ENST00000515834 CATSPERDQ86XM0 798 aa10.16□□□□□ -0.78
TRIM41-209ENST00000515834 COQ10AQ96MF6 247 aa10.16□□□□□ -0.78
TRIM41-209ENST00000515834 GPR173Q9NS66 373 aa10.16□□□□□ -0.78
TRIM41-209ENST00000515834 ONECUT1Q9UBC0 465 aa10.16□□□□□ -0.78
TRIM41-209ENST00000515834 PGAP2Q9UHJ9 254 aa10.16□□□□□ -0.78
TRIM41-209ENST00000515834 NALCNQ8IZF0 1738 aa10.16□□□□□ -0.78
TRIM41-209ENST00000515834 CRYAAP02489 173 aa10.16□□□□□ -0.78
TRIM41-209ENST00000515834 ZNF74Q16587 644 aa10.16□□□□□ -0.78
TRIM41-209ENST00000515834 ZC3H3Q8IXZ2 948 aaKnown RBP10.16□□□□□ -0.78
TRIM41-209ENST00000515834 OR13J1Q8NGT2 312 aa10.16□□□□□ -0.78
TRIM41-209ENST00000515834 WDR76Q9H967 626 aa10.16□□□□□ -0.78
TRIM41-209ENST00000515834 MMP17Q9ULZ9 603 aa10.16□□□□□ -0.78
TRIM41-209ENST00000515834 SPEF2Q9C093 1822 aa10.16□□□□□ -0.78
TRIM41-209ENST00000515834 FECHP22830 423 aa10.16□□□□□ -0.78
TRIM41-209ENST00000515834 OR8G2PQ6IF36 304 aa10.16□□□□□ -0.78
TRIM41-209ENST00000515834 C5orf46Q6UWT4 87 aa10.16□□□□□ -0.78
TRIM41-209ENST00000515834 FBXO17Q96EF6 278 aa10.16□□□□□ -0.78
TRIM41-209ENST00000515834 RICTORQ6R327 1708 aa10.16□□□□□ -0.78
TRIM41-209ENST00000515834 GUSBP08236 651 aa10.16□□□□□ -0.78
TRIM41-209ENST00000515834 C7P10643 843 aa10.16□□□□□ -0.78
TRIM41-209ENST00000515834 SRFP11831 508 aa10.16□□□□□ -0.78
TRIM41-209ENST00000515834 FAM69AQ5T7M9 428 aa10.16□□□□□ -0.78
TRIM41-209ENST00000515834 HIST2H3PS2Q5TEC6 136 aa10.16□□□□□ -0.78
TRIM41-209ENST00000515834 CAMKMTQ7Z624 323 aa10.16□□□□□ -0.78
TRIM41-209ENST00000515834 VRK3Q8IV63 474 aa10.16□□□□□ -0.78
TRIM41-209ENST00000515834 GDPD1Q8N9F7 314 aa10.16□□□□□ -0.78
TRIM41-209ENST00000515834 FBXO27Q8NI29 283 aa10.16□□□□□ -0.78
TRIM41-209ENST00000515834 ZFP90Q8TF47 636 aa10.16□□□□□ -0.78
TRIM41-209ENST00000515834 DEDD2Q8WXF8 326 aa10.16□□□□□ -0.78
TRIM41-209ENST00000515834 RASD2Q96D21 266 aa10.16□□□□□ -0.78
TRIM41-209ENST00000515834 ASB16Q96NS5 453 aa10.16□□□□□ -0.78
TRIM41-209ENST00000515834 DHRS9Q9BPW9 319 aa10.16□□□□□ -0.78
TRIM41-209ENST00000515834 BABAM2Q9NXR7 383 aa10.16□□□□□ -0.78
TRIM41-209ENST00000515834 HS3ST2Q9Y278 367 aa10.16□□□□□ -0.78
TRIM41-209ENST00000515834 R4GN57 208 aa10.16□□□□□ -0.78
TRIM41-209ENST00000515834 ANKRD12Q6UB98 2062 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms