RNA–Protein interactions for RNA: ENST00000515711.1

LMNA-224, Transcript of lamin A/C, human

TSL 5

Gene LMNA, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-224	ENST00000515711	SSR3	Q9UNL2	185 aa		10.76	□□□□□ -0.69
LMNA-224	ENST00000515711	FKBP7	Q9Y680	259 aa		10.76	□□□□□ -0.69
LMNA-224	ENST00000515711	NPIPA5	E9PKD4	350 aa		10.75	□□□□□ -0.69
LMNA-224	ENST00000515711	C11orf98	E9PRG8	122 aa		10.75	□□□□□ -0.69
LMNA-224	ENST00000515711		H3BML4	177 aa		10.75	□□□□□ -0.69
LMNA-224	ENST00000515711	ATXN7	O15265	892 aa	Predicted RBP	10.75	□□□□□ -0.69
LMNA-224	ENST00000515711	SERPINI2	O75830	405 aa		10.75	□□□□□ -0.69
LMNA-224	ENST00000515711	CLPX	O76031	633 aa		10.75	□□□□□ -0.69
LMNA-224	ENST00000515711	PMS2P2	O95744	297 aa		10.75	□□□□□ -0.69
LMNA-224	ENST00000515711	GYPB	P06028	91 aa		10.75	□□□□□ -0.69
LMNA-224	ENST00000515711	CLU	P10909	449 aa		10.75	□□□□□ -0.69
LMNA-224	ENST00000515711	NR4A1	P22736	598 aa		10.75	□□□□□ -0.69
LMNA-224	ENST00000515711	AHCY	P23526	432 aa		10.75	□□□□□ -0.69
LMNA-224	ENST00000515711	ITGA3	P26006	1051 aa		10.75	□□□□□ -0.69
LMNA-224	ENST00000515711	CDKN2A	P42771	156 aa	Known RBP	10.75	□□□□□ -0.69
LMNA-224	ENST00000515711	NCS1	P62166	190 aa		10.75	□□□□□ -0.69
LMNA-224	ENST00000515711	MYBPH	Q13203	477 aa		10.75	□□□□□ -0.69
LMNA-224	ENST00000515711	TRAM1	Q15629	374 aa		10.75	□□□□□ -0.69
LMNA-224	ENST00000515711	ACKR1	Q16570	336 aa		10.75	□□□□□ -0.69
LMNA-224	ENST00000515711	ZNF239	Q16600	458 aa	Known RBP	10.75	□□□□□ -0.69
LMNA-224	ENST00000515711	DNM1P34	Q6PK57	102 aa		10.75	□□□□□ -0.69
LMNA-224	ENST00000515711	TMPRSS7	Q7RTY8	843 aa		10.75	□□□□□ -0.69
LMNA-224	ENST00000515711	PXK	Q7Z7A4	578 aa		10.75	□□□□□ -0.69
LMNA-224	ENST00000515711	SLC35F2	Q8IXU6	374 aa		10.75	□□□□□ -0.69
LMNA-224	ENST00000515711	SYS1	Q8N2H4	156 aa		10.75	□□□□□ -0.69
LMNA-224	ENST00000515711	TMEM99	Q8N816	258 aa		10.75	□□□□□ -0.69
LMNA-224	ENST00000515711	EXD3	Q8N9H8	876 aa		10.75	□□□□□ -0.69
LMNA-224	ENST00000515711	OR6K6	Q8NGW6	343 aa		10.75	□□□□□ -0.69
LMNA-224	ENST00000515711	NDNF	Q8TB73	568 aa		10.75	□□□□□ -0.69
LMNA-224	ENST00000515711	DYNC2LI1	Q8TCX1	351 aa		10.75	□□□□□ -0.69
LMNA-224	ENST00000515711	SPRYD4	Q8WW59	207 aa	Predicted RBP	10.75	□□□□□ -0.69
LMNA-224	ENST00000515711	GATAD2B	Q8WXI9	593 aa		10.75	□□□□□ -0.69
LMNA-224	ENST00000515711	THAP4	Q8WY91	577 aa		10.75	□□□□□ -0.69
LMNA-224	ENST00000515711	PSMF1	Q92530	271 aa		10.75	□□□□□ -0.69
LMNA-224	ENST00000515711	ZMYND19	Q96E35	227 aa	Predicted RBP	10.75	□□□□□ -0.69
LMNA-224	ENST00000515711	ARL5B	Q96KC2	179 aa		10.75	□□□□□ -0.69
LMNA-224	ENST00000515711	CHCHD6	Q9BRQ6	235 aa		10.75	□□□□□ -0.69
LMNA-224	ENST00000515711	ZNF649	Q9BS31	505 aa		10.75	□□□□□ -0.69
LMNA-224	ENST00000515711	ALG12	Q9BV10	488 aa		10.75	□□□□□ -0.69
LMNA-224	ENST00000515711	DCSTAMP	Q9H295	470 aa		10.75	□□□□□ -0.69
LMNA-224	ENST00000515711	ASCL3	Q9NQ33	180 aa		10.75	□□□□□ -0.69
LMNA-224	ENST00000515711	RPRD1B	Q9NQG5	326 aa	Known RBP	10.75	□□□□□ -0.69
LMNA-224	ENST00000515711	ASB6	Q9NWX5	421 aa		10.75	□□□□□ -0.69
LMNA-224	ENST00000515711	VSX1	Q9NZR4	365 aa	Predicted RBP	10.75	□□□□□ -0.69
LMNA-224	ENST00000515711	NPIPA1	Q9UND3	350 aa		10.75	□□□□□ -0.69
LMNA-224	ENST00000515711	TRAPPC4	Q9Y296	219 aa		10.75	□□□□□ -0.69
LMNA-224	ENST00000515711	MRPS18C	Q9Y3D5	142 aa	Known RBP	10.75	□□□□□ -0.69
LMNA-224	ENST00000515711	MRPS18B	Q9Y676	258 aa	Known RBP	10.75	□□□□□ -0.69
LMNA-224	ENST00000515711	A3GALT2	U3KPV4	340 aa		10.75	□□□□□ -0.69
LMNA-224	ENST00000515711	MYO18B	Q8IUG5	2567 aa		10.75	□□□□□ -0.69
LMNA-224	ENST00000515711	CFAP46	Q8IYW2	2715 aa		10.74	□□□□□ -0.69
LMNA-224	ENST00000515711	LOC100506127	A0A0U1RQW1	187 aa		10.74	□□□□□ -0.69
LMNA-224	ENST00000515711	PRSS37	A4D1T9	235 aa		10.74	□□□□□ -0.69
LMNA-224	ENST00000515711	VGLL3	A8MV65	326 aa		10.74	□□□□□ -0.69
LMNA-224	ENST00000515711	ZNF670-ZNF695	F2Z2N8	137 aa		10.74	□□□□□ -0.69
LMNA-224	ENST00000515711	PHYH	O14832	338 aa		10.74	□□□□□ -0.69
LMNA-224	ENST00000515711	DNPH1	O43598	174 aa		10.74	□□□□□ -0.69
LMNA-224	ENST00000515711	MRPL3	P09001	348 aa	Known RBP	10.74	□□□□□ -0.69
LMNA-224	ENST00000515711	IMPDH2	P12268	514 aa		10.74	□□□□□ -0.69
LMNA-224	ENST00000515711	CNR1	P21554	472 aa		10.74	□□□□□ -0.69
LMNA-224	ENST00000515711	CRABP1	P29762	137 aa		10.74	□□□□□ -0.69
LMNA-224	ENST00000515711	ACVR1B	P36896	505 aa		10.74	□□□□□ -0.69
LMNA-224	ENST00000515711	LSM3	P62310	102 aa	Known RBP	10.74	□□□□□ -0.69
LMNA-224	ENST00000515711	SLC35A1	P78382	337 aa		10.74	□□□□□ -0.69
LMNA-224	ENST00000515711	OC90	Q02509	493 aa	Predicted RBP	10.74	□□□□□ -0.69
LMNA-224	ENST00000515711	MRPL28	Q13084	256 aa	Known RBP	10.74	□□□□□ -0.69
LMNA-224	ENST00000515711	INPP5J	Q15735	1006 aa	Predicted RBP	10.74	□□□□□ -0.69
LMNA-224	ENST00000515711	LINC01590	Q5TEZ4	76 aa		10.74	□□□□□ -0.69
LMNA-224	ENST00000515711	EEF1A1P5	Q5VTE0	462 aa		10.74	□□□□□ -0.69
LMNA-224	ENST00000515711	LIPK	Q5VXJ0	399 aa		10.74	□□□□□ -0.69
LMNA-224	ENST00000515711	RAET1L	Q5VY80	246 aa		10.74	□□□□□ -0.69
LMNA-224	ENST00000515711	B3GNTL1	Q67FW5	361 aa	Predicted RBP	10.74	□□□□□ -0.69
LMNA-224	ENST00000515711	SLC16A9	Q7RTY1	509 aa		10.74	□□□□□ -0.69
LMNA-224	ENST00000515711	ATP6V1C2	Q8NEY4	427 aa		10.74	□□□□□ -0.69
LMNA-224	ENST00000515711	KCNE4	Q8WWG9	221 aa		10.74	□□□□□ -0.69
LMNA-224	ENST00000515711	TM9SF4	Q92544	642 aa		10.74	□□□□□ -0.69
LMNA-224	ENST00000515711	RPL3L	Q92901	407 aa	Known RBP	10.74	□□□□□ -0.69
LMNA-224	ENST00000515711	MIB2	Q96AX9	1013 aa		10.74	□□□□□ -0.69
LMNA-224	ENST00000515711	OR5B2	Q96R09	309 aa		10.74	□□□□□ -0.69
LMNA-224	ENST00000515711	NPAS1	Q99742	590 aa		10.74	□□□□□ -0.69
LMNA-224	ENST00000515711	UTP23	Q9BRU9	249 aa	Known RBP	10.74	□□□□□ -0.69
LMNA-224	ENST00000515711	OR51E2	Q9H255	320 aa		10.74	□□□□□ -0.69
LMNA-224	ENST00000515711	STMN3	Q9NZ72	180 aa		10.74	□□□□□ -0.69
LMNA-224	ENST00000515711	LRFN1	Q9P244	771 aa		10.74	□□□□□ -0.69
LMNA-224	ENST00000515711	B4GALT7	Q9UBV7	327 aa		10.74	□□□□□ -0.69
LMNA-224	ENST00000515711	IL17B	Q9UHF5	180 aa		10.74	□□□□□ -0.69
LMNA-224	ENST00000515711	RPH3A	Q9Y2J0	694 aa	Predicted RBP	10.74	□□□□□ -0.69
LMNA-224	ENST00000515711	TMEM14A	Q9Y6G1	99 aa		10.74	□□□□□ -0.69
LMNA-224	ENST00000515711		A0A1W2PQL4	384 aa	Predicted RBP	10.73	□□□□□ -0.69
LMNA-224	ENST00000515711	HSPB2	A8KAH6	182 aa		10.73	□□□□□ -0.69
LMNA-224	ENST00000515711	LINC01387	J3KSC0	135 aa		10.73	□□□□□ -0.69
LMNA-224	ENST00000515711	ARHGEF9	O43307	516 aa		10.73	□□□□□ -0.69
LMNA-224	ENST00000515711	WISP1	O95388	367 aa		10.73	□□□□□ -0.69
LMNA-224	ENST00000515711	GAA	P10253	952 aa		10.73	□□□□□ -0.69
LMNA-224	ENST00000515711	NR2C1	P13056	603 aa		10.73	□□□□□ -0.69
LMNA-224	ENST00000515711	SOX6	P35712	828 aa		10.73	□□□□□ -0.69
LMNA-224	ENST00000515711	SOX8	P57073	446 aa		10.73	□□□□□ -0.69
LMNA-224	ENST00000515711	OR2B6	P58173	313 aa		10.73	□□□□□ -0.69
LMNA-224	ENST00000515711	CSNK2A1	P68400	391 aa	Predicted RBP	10.73	□□□□□ -0.69
LMNA-224	ENST00000515711	HSF1	Q00613	529 aa		10.73	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms