RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, human

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-223	ENST00000515459	AQP5	P55064	265 aa		13.48	□□□□□ -0.25
LMNA-223	ENST00000515459	NKPD1	Q17RQ9	610 aa		13.48	□□□□□ -0.25
LMNA-223	ENST00000515459	MS4A18	Q3C1V0	323 aa		13.48	□□□□□ -0.25
LMNA-223	ENST00000515459	GLIPR1L2	Q4G1C9	344 aa		13.48	□□□□□ -0.25
LMNA-223	ENST00000515459	PRR31	Q5SQ13	230 aa		13.48	□□□□□ -0.25
LMNA-223	ENST00000515459	C1QL2	Q7Z5L3	287 aa		13.48	□□□□□ -0.25
LMNA-223	ENST00000515459	GLB1L3	Q8NCI6	653 aa	Predicted RBP	13.48	□□□□□ -0.25
LMNA-223	ENST00000515459	OR4M2	Q8NGB6	313 aa		13.48	□□□□□ -0.25
LMNA-223	ENST00000515459	ZNF665	Q9H7R5	613 aa		13.48	□□□□□ -0.25
LMNA-223	ENST00000515459	GPR45	Q9Y5Y3	372 aa		13.48	□□□□□ -0.25
LMNA-223	ENST00000515459	PLPP2	O43688	288 aa		13.47	□□□□□ -0.25
LMNA-223	ENST00000515459	CDC14B	O60729	498 aa		13.47	□□□□□ -0.25
LMNA-223	ENST00000515459	UBL3	O95164	117 aa		13.47	□□□□□ -0.25
LMNA-223	ENST00000515459	BCL10	O95999	233 aa		13.47	□□□□□ -0.25
LMNA-223	ENST00000515459	HPR	P00739	348 aa		13.47	□□□□□ -0.25
LMNA-223	ENST00000515459	IL6	P05231	212 aa		13.47	□□□□□ -0.25
LMNA-223	ENST00000515459	ZCCHC18	P0CG32	403 aa		13.47	□□□□□ -0.25
LMNA-223	ENST00000515459	HLA-DOB	P13765	273 aa		13.47	□□□□□ -0.25
LMNA-223	ENST00000515459	MAGEB1	P43366	347 aa		13.47	□□□□□ -0.25
LMNA-223	ENST00000515459	ALKBH6	Q3KRA9	238 aa		13.47	□□□□□ -0.25
LMNA-223	ENST00000515459	MMEL1	Q495T6	779 aa		13.47	□□□□□ -0.25
LMNA-223	ENST00000515459	BPIFB2	Q8N4F0	458 aa		13.47	□□□□□ -0.25
LMNA-223	ENST00000515459	LSMEM1	Q8N8F7	131 aa		13.47	□□□□□ -0.25
LMNA-223	ENST00000515459	OR6N1	Q8NGY5	312 aa		13.47	□□□□□ -0.25
LMNA-223	ENST00000515459	RAB39B	Q96DA2	213 aa		13.47	□□□□□ -0.25
LMNA-223	ENST00000515459	SLC41A3	Q96GZ6	507 aa		13.47	□□□□□ -0.25
LMNA-223	ENST00000515459	FOXB1	Q99853	325 aa		13.47	□□□□□ -0.25
LMNA-223	ENST00000515459	SLC6A7	Q99884	636 aa		13.47	□□□□□ -0.25
LMNA-223	ENST00000515459	TMPRSS13	Q9BYE2	586 aa		13.47	□□□□□ -0.25
LMNA-223	ENST00000515459	ULBP2	Q9BZM5	246 aa		13.47	□□□□□ -0.25
LMNA-223	ENST00000515459	PNPO	Q9NVS9	261 aa		13.47	□□□□□ -0.25
LMNA-223	ENST00000515459	MED29	Q9NX70	200 aa		13.47	□□□□□ -0.25
LMNA-223	ENST00000515459	GPR160	Q9UJ42	338 aa		13.47	□□□□□ -0.25
LMNA-223	ENST00000515459	IGKV1D-42	A0A075B6H8	117 aa		13.46	□□□□□ -0.25
LMNA-223	ENST00000515459		A0A087WUJ7	227 aa		13.46	□□□□□ -0.25
LMNA-223	ENST00000515459		A0A1B0GWA3	101 aa		13.46	□□□□□ -0.25
LMNA-223	ENST00000515459	ZNF726	A6NNF4	738 aa		13.46	□□□□□ -0.25
LMNA-223	ENST00000515459	C17orf100	A8MU93	164 aa		13.46	□□□□□ -0.25
LMNA-223	ENST00000515459		J3QLI3	93 aa		13.46	□□□□□ -0.25
LMNA-223	ENST00000515459	SELENOV	P59797	346 aa		13.46	□□□□□ -0.25
LMNA-223	ENST00000515459	CCL8	P80075	99 aa		13.46	□□□□□ -0.25
LMNA-223	ENST00000515459	MVK	Q03426	396 aa		13.46	□□□□□ -0.25
LMNA-223	ENST00000515459	CAMK2D	Q13557	499 aa		13.46	□□□□□ -0.25
LMNA-223	ENST00000515459	RAB39A	Q14964	217 aa		13.46	□□□□□ -0.25
LMNA-223	ENST00000515459	PDCD4	Q53EL6	469 aa	Known RBP	13.46	□□□□□ -0.25
LMNA-223	ENST00000515459	ALG10B	Q5I7T1	473 aa		13.46	□□□□□ -0.25
LMNA-223	ENST00000515459	AVPI1	Q5T686	147 aa		13.46	□□□□□ -0.25
LMNA-223	ENST00000515459	RGS7BP	Q6MZT1	257 aa	Predicted RBP	13.46	□□□□□ -0.25
LMNA-223	ENST00000515459	NANP	Q8TBE9	248 aa		13.46	□□□□□ -0.25
LMNA-223	ENST00000515459	DNAJA4	Q8WW22	397 aa	Predicted RBP	13.46	□□□□□ -0.25
LMNA-223	ENST00000515459	TXNDC15	Q96J42	360 aa		13.46	□□□□□ -0.25
LMNA-223	ENST00000515459	ZNF747	Q9BV97	191 aa		13.46	□□□□□ -0.25
LMNA-223	ENST00000515459	ZNF696	Q9H7X3	374 aa		13.46	□□□□□ -0.25
LMNA-223	ENST00000515459	BCL2L10	Q9HD36	194 aa		13.46	□□□□□ -0.25
LMNA-223	ENST00000515459	TAAR3P	Q9P1P4	343 aa		13.46	□□□□□ -0.25
LMNA-223	ENST00000515459	KLHL14	Q9P2G3	628 aa		13.46	□□□□□ -0.25
LMNA-223	ENST00000515459	PCDHGB1	Q9Y5G3	927 aa		13.46	□□□□□ -0.25
LMNA-223	ENST00000515459	CORIN	Q9Y5Q5	1042 aa		13.46	□□□□□ -0.25
LMNA-223	ENST00000515459	SDHD	O14521	159 aa		13.45	□□□□□ -0.26
LMNA-223	ENST00000515459	TMPRSS2	O15393	492 aa		13.45	□□□□□ -0.26
LMNA-223	ENST00000515459	DEAF1	O75398	565 aa	Predicted RBP	13.45	□□□□□ -0.26
LMNA-223	ENST00000515459	SERPINA5	P05154	406 aa		13.45	□□□□□ -0.26
LMNA-223	ENST00000515459	ADRA2C	P18825	462 aa		13.45	□□□□□ -0.26
LMNA-223	ENST00000515459	BGN	P21810	368 aa		13.45	□□□□□ -0.26
LMNA-223	ENST00000515459	TEK	Q02763	1124 aa		13.45	□□□□□ -0.26
LMNA-223	ENST00000515459	STX3	Q13277	289 aa		13.45	□□□□□ -0.26
LMNA-223	ENST00000515459	PCGF3	Q3KNV8	242 aa		13.45	□□□□□ -0.26
LMNA-223	ENST00000515459	DCAF12L2	Q5VW00	463 aa		13.45	□□□□□ -0.26
LMNA-223	ENST00000515459	TMEM154	Q6P9G4	183 aa		13.45	□□□□□ -0.26
LMNA-223	ENST00000515459	ULK3	Q6PHR2	472 aa		13.45	□□□□□ -0.26
LMNA-223	ENST00000515459	SHISA2	Q6UWI4	295 aa		13.45	□□□□□ -0.26
LMNA-223	ENST00000515459	PIWIL3	Q7Z3Z3	882 aa	Known RBP	13.45	□□□□□ -0.26
LMNA-223	ENST00000515459	ZNF584	Q8IVC4	421 aa		13.45	□□□□□ -0.26
LMNA-223	ENST00000515459	ZDHHC22	Q8N966	263 aa		13.45	□□□□□ -0.26
LMNA-223	ENST00000515459	SCAI	Q8N9R8	606 aa		13.45	□□□□□ -0.26
LMNA-223	ENST00000515459	OR6S1	Q8NH40	331 aa		13.45	□□□□□ -0.26
LMNA-223	ENST00000515459	SNX33	Q8WV41	574 aa		13.45	□□□□□ -0.26
LMNA-223	ENST00000515459	VPS33A	Q96AX1	596 aa		13.45	□□□□□ -0.26
LMNA-223	ENST00000515459	EPYC	Q99645	322 aa		13.45	□□□□□ -0.26
LMNA-223	ENST00000515459	ASPN	Q9BXN1	380 aa		13.45	□□□□□ -0.26
LMNA-223	ENST00000515459	RMND5A	Q9H871	391 aa		13.45	□□□□□ -0.26
LMNA-223	ENST00000515459	ESM1	Q9NQ30	184 aa		13.45	□□□□□ -0.26
LMNA-223	ENST00000515459	HINT3	Q9NQE9	182 aa	Known RBP	13.45	□□□□□ -0.26
LMNA-223	ENST00000515459	DDX28	Q9NUL7	540 aa	Known RBP	13.45	□□□□□ -0.26
LMNA-223	ENST00000515459	SLC22A23	A1A5C7	686 aa		13.44	□□□□□ -0.26
LMNA-223	ENST00000515459	TM9SF1	O15321	606 aa		13.44	□□□□□ -0.26
LMNA-223	ENST00000515459	SLC22A3	O75751	556 aa		13.44	□□□□□ -0.26
LMNA-223	ENST00000515459	FAM157B	P0CG42	384 aa		13.44	□□□□□ -0.26
LMNA-223	ENST00000515459	GATA3	P23771	443 aa		13.44	□□□□□ -0.26
LMNA-223	ENST00000515459	HTR2A	P28223	471 aa		13.44	□□□□□ -0.26
LMNA-223	ENST00000515459	EPHA3	P29320	983 aa		13.44	□□□□□ -0.26
LMNA-223	ENST00000515459	CRYBB2	P43320	205 aa		13.44	□□□□□ -0.26
LMNA-223	ENST00000515459	KLF3	P57682	345 aa	Predicted RBP	13.44	□□□□□ -0.26
LMNA-223	ENST00000515459	UBA52	P62987	128 aa	Known RBP	13.44	□□□□□ -0.26
LMNA-223	ENST00000515459	PUDP	Q08623	228 aa		13.44	□□□□□ -0.26
LMNA-223	ENST00000515459	FOXL1	Q12952	345 aa		13.44	□□□□□ -0.26
LMNA-223	ENST00000515459	PMS2P3	Q13401	168 aa		13.44	□□□□□ -0.26
LMNA-223	ENST00000515459	GTDC1	Q4AE62	458 aa		13.44	□□□□□ -0.26
LMNA-223	ENST00000515459	FAM91A1	Q658Y4	838 aa		13.44	□□□□□ -0.26
LMNA-223	ENST00000515459	NHLRC1	Q6VVB1	395 aa		13.44	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 23 ms