RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 ARL8BQ9NVJ2 186 aa10.02□□□□□ -0.81
VCAN-212ENST00000515397 ADA2Q9NZK5 511 aa10.02□□□□□ -0.81
VCAN-212ENST00000515397 A4GNTQ9UNA3 340 aa10.02□□□□□ -0.81
VCAN-212ENST00000515397 NOX1Q9Y5S8 564 aa10.02□□□□□ -0.81
VCAN-212ENST00000515397 ZANQ9Y493 2812 aa10.02□□□□□ -0.81
VCAN-212ENST00000515397 NAV3Q8IVL0 2385 aa10.02□□□□□ -0.81
VCAN-212ENST00000515397 OR6C65A6NJZ3 312 aa10.01□□□□□ -0.81
VCAN-212ENST00000515397 RPL36A-HNRNPH2H7BZ11 118 aa10.01□□□□□ -0.81
VCAN-212ENST00000515397 FFAR1O14842 300 aa10.01□□□□□ -0.81
VCAN-212ENST00000515397 OR7A10O76100 309 aa10.01□□□□□ -0.81
VCAN-212ENST00000515397 OR5F1O95221 314 aa10.01□□□□□ -0.81
VCAN-212ENST00000515397 MT-ATP6P00846 226 aa10.01□□□□□ -0.81
VCAN-212ENST00000515397 HLA-HP01893 362 aa10.01□□□□□ -0.81
VCAN-212ENST00000515397 MT-ND1P03886 318 aa10.01□□□□□ -0.81
VCAN-212ENST00000515397 INHBBP09529 407 aa10.01□□□□□ -0.81
VCAN-212ENST00000515397 ASAH2BP0C7U1 165 aa10.01□□□□□ -0.81
VCAN-212ENST00000515397 B4GALT1P15291 398 aa10.01□□□□□ -0.81
VCAN-212ENST00000515397 CALCRP30988 508 aa10.01□□□□□ -0.81
VCAN-212ENST00000515397 TTKP33981 857 aa10.01□□□□□ -0.81
VCAN-212ENST00000515397 ACVR1BP36896 505 aa10.01□□□□□ -0.81
VCAN-212ENST00000515397 MYBPC1Q00872 1141 aa10.01□□□□□ -0.81
VCAN-212ENST00000515397 NPRL3Q12980 569 aa10.01□□□□□ -0.81
VCAN-212ENST00000515397 VHLLQ6RSH7 139 aa10.01□□□□□ -0.81
VCAN-212ENST00000515397 TBPL2Q6SJ96 375 aa10.01□□□□□ -0.81
VCAN-212ENST00000515397 NANOGNBQ7Z5D8 188 aa10.01□□□□□ -0.81
VCAN-212ENST00000515397 MDP1Q86V88 176 aa10.01□□□□□ -0.81
VCAN-212ENST00000515397 DEPDC4Q8N2C3 294 aa10.01□□□□□ -0.81
VCAN-212ENST00000515397 SYT14Q8NB59 555 aa10.01□□□□□ -0.81
VCAN-212ENST00000515397 FAM162AQ96A26 154 aa10.01□□□□□ -0.81
VCAN-212ENST00000515397 CMTM5Q96DZ9 223 aa10.01□□□□□ -0.81
VCAN-212ENST00000515397 SGTBQ96EQ0 304 aa10.01□□□□□ -0.81
VCAN-212ENST00000515397 HSH2DQ96JZ2 352 aa10.01□□□□□ -0.81
VCAN-212ENST00000515397 C18orf12Q96KH6 178 aa10.01□□□□□ -0.81
VCAN-212ENST00000515397 SLC38A2Q96QD8 506 aa10.01□□□□□ -0.81
VCAN-212ENST00000515397 DHRS9Q9BPW9 319 aa10.01□□□□□ -0.81
VCAN-212ENST00000515397 KCTD14Q9BQ13 255 aaPredicted RBP10.01□□□□□ -0.81
VCAN-212ENST00000515397 ULBP2Q9BZM5 246 aa10.01□□□□□ -0.81
VCAN-212ENST00000515397 NSRP1Q9H0G5 558 aaKnown RBP10.01□□□□□ -0.81
VCAN-212ENST00000515397 ALG2Q9H553 416 aa10.01□□□□□ -0.81
VCAN-212ENST00000515397 FKRPQ9H9S5 495 aa10.01□□□□□ -0.81
VCAN-212ENST00000515397 NOX3Q9HBY0 568 aa10.01□□□□□ -0.81
VCAN-212ENST00000515397 MGAT4BQ9UQ53 548 aa10.01□□□□□ -0.81
VCAN-212ENST00000515397 POFUT2Q9Y2G5 429 aa10.01□□□□□ -0.81
VCAN-212ENST00000515397 V9GYQ6 96 aa10.01□□□□□ -0.81
VCAN-212ENST00000515397 AKAP8O43823 692 aaKnown RBP10□□□□□ -0.81
VCAN-212ENST00000515397 IGHV4-39P01824 125 aa10□□□□□ -0.81
VCAN-212ENST00000515397 CECR9P0C854 216 aa10□□□□□ -0.81
VCAN-212ENST00000515397 CD79AP11912 226 aa10□□□□□ -0.81
VCAN-212ENST00000515397 IFI30P13284 250 aa10□□□□□ -0.81
VCAN-212ENST00000515397 MAKP20794 623 aa10□□□□□ -0.81
VCAN-212ENST00000515397 CSNK1A1P48729 337 aa10□□□□□ -0.81
VCAN-212ENST00000515397 IDH3GP51553 393 aaPredicted RBP10□□□□□ -0.81
VCAN-212ENST00000515397 RPL18Q07020 188 aaKnown RBP10□□□□□ -0.81
VCAN-212ENST00000515397 ZP4Q12836 540 aa10□□□□□ -0.81
VCAN-212ENST00000515397 TNK1Q13470 666 aa10□□□□□ -0.81
VCAN-212ENST00000515397 LRFN4Q6PJG9 635 aa10□□□□□ -0.81
VCAN-212ENST00000515397 HACD2Q6Y1H2 254 aa10□□□□□ -0.81
VCAN-212ENST00000515397 ZNF813Q6ZN06 617 aa10□□□□□ -0.81
VCAN-212ENST00000515397 TSEN54Q7Z6J9 526 aaKnown RBP10□□□□□ -0.81
VCAN-212ENST00000515397 ARPINQ7Z6K5 226 aa10□□□□□ -0.81
VCAN-212ENST00000515397 PIGWQ7Z7B1 504 aa10□□□□□ -0.81
VCAN-212ENST00000515397 IGFN1Q86VF2 1251 aa10□□□□□ -0.81
VCAN-212ENST00000515397 FBXL14Q8N1E6 418 aa10□□□□□ -0.81
VCAN-212ENST00000515397 MUC15Q8N387 334 aa10□□□□□ -0.81
VCAN-212ENST00000515397 FGFBP3Q8TAT2 258 aa10□□□□□ -0.81
VCAN-212ENST00000515397 FBXO17Q96EF6 278 aa10□□□□□ -0.81
VCAN-212ENST00000515397 TRMT61AQ96FX7 289 aaKnown RBP10□□□□□ -0.81
VCAN-212ENST00000515397 MS4A3Q96HJ5 214 aa10□□□□□ -0.81
VCAN-212ENST00000515397 ZNF347Q96SE7 839 aa10□□□□□ -0.81
VCAN-212ENST00000515397 CACNG6Q9BXT2 260 aa10□□□□□ -0.81
VCAN-212ENST00000515397 ZNF229Q9UJW7 825 aa10□□□□□ -0.81
VCAN-212ENST00000515397 RTTNQ86VV8 2226 aa10□□□□□ -0.81
VCAN-212ENST00000515397 ARPC4-TTLL3A0A0A6YYG9 625 aa9.99□□□□□ -0.81
VCAN-212ENST00000515397 ZNF99A8MXY4 864 aaPredicted RBP9.99□□□□□ -0.81
VCAN-212ENST00000515397 SSX4O60224 188 aa9.99□□□□□ -0.81
VCAN-212ENST00000515397 LY6HO94772 140 aa9.99□□□□□ -0.81
VCAN-212ENST00000515397 DIRAS1O95057 198 aa9.99□□□□□ -0.81
VCAN-212ENST00000515397 LY6G6DO95868 133 aa9.99□□□□□ -0.81
VCAN-212ENST00000515397 BCL10O95999 233 aa9.99□□□□□ -0.81
VCAN-212ENST00000515397 IFNW1P05000 195 aa9.99□□□□□ -0.81
VCAN-212ENST00000515397 PAX1P15863 534 aa9.99□□□□□ -0.81
VCAN-212ENST00000515397 CBR1P16152 277 aa9.99□□□□□ -0.81
VCAN-212ENST00000515397 NAAAQ02083 359 aa9.99□□□□□ -0.81
VCAN-212ENST00000515397 HGFACQ04756 655 aa9.99□□□□□ -0.81
VCAN-212ENST00000515397 TOP3AQ13472 1001 aaPredicted RBP9.99□□□□□ -0.81
VCAN-212ENST00000515397 CLEC12BQ2HXU8 276 aa9.99□□□□□ -0.81
VCAN-212ENST00000515397 MST1LQ2TV78 715 aa9.99□□□□□ -0.81
VCAN-212ENST00000515397 IFI44LQ53G44 452 aa9.99□□□□□ -0.81
VCAN-212ENST00000515397 AGAP6Q5VW22 663 aa9.99□□□□□ -0.81
VCAN-212ENST00000515397 GLYATQ6IB77 296 aa9.99□□□□□ -0.81
VCAN-212ENST00000515397 PRSS57Q6UWY2 283 aa9.99□□□□□ -0.81
VCAN-212ENST00000515397 CLEC9AQ6UXN8 241 aa9.99□□□□□ -0.81
VCAN-212ENST00000515397 CBLL1Q75N03 491 aa9.99□□□□□ -0.81
VCAN-212ENST00000515397 SSX8Q7RTT4 187 aa9.99□□□□□ -0.81
VCAN-212ENST00000515397 DTX2Q86UW9 622 aa9.99□□□□□ -0.81
VCAN-212ENST00000515397 FAM86B1Q8N7N1 296 aa9.99□□□□□ -0.81
VCAN-212ENST00000515397 ANKK1Q8NFD2 765 aa9.99□□□□□ -0.81
VCAN-212ENST00000515397 OR51A7Q8NH64 312 aa9.99□□□□□ -0.81
VCAN-212ENST00000515397 OR6X1Q8NH79 312 aa9.99□□□□□ -0.81
VCAN-212ENST00000515397 LZICQ8WZA0 190 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms