RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 A6NIZ1 184 aa18.61■□□□□ 0.57
LSM6-207ENST00000515311 LRRTM2O43300 516 aa18.61■□□□□ 0.57
LSM6-207ENST00000515311 MRPL33O75394 65 aaKnown RBP18.61■□□□□ 0.57
LSM6-207ENST00000515311 ZNF432O94892 652 aa18.61■□□□□ 0.57
LSM6-207ENST00000515311 NTF4P34130 210 aa18.61■□□□□ 0.57
LSM6-207ENST00000515311 OPRM1P35372 400 aa18.61■□□□□ 0.57
LSM6-207ENST00000515311 GIPRP48546 466 aa18.61■□□□□ 0.57
LSM6-207ENST00000515311 BIDP55957 195 aa18.61■□□□□ 0.57
LSM6-207ENST00000515311 RAP1BP61224 184 aa18.61■□□□□ 0.57
LSM6-207ENST00000515311 RAP1AP62834 184 aa18.61■□□□□ 0.57
LSM6-207ENST00000515311 CDK5Q00535 292 aa18.61■□□□□ 0.57
LSM6-207ENST00000515311 NPRL3Q12980 569 aa18.61■□□□□ 0.57
LSM6-207ENST00000515311 TOP3AQ13472 1001 aaPredicted RBP18.61■□□□□ 0.57
LSM6-207ENST00000515311 AAED1Q7RTV5 226 aa18.61■□□□□ 0.57
LSM6-207ENST00000515311 ARIH2OSQ8N7S6 290 aa18.61■□□□□ 0.57
LSM6-207ENST00000515311 CNEP1R1Q8N9A8 125 aa18.61■□□□□ 0.57
LSM6-207ENST00000515311 ZNF519Q8TB69 540 aa18.61■□□□□ 0.57
LSM6-207ENST00000515311 ZNF775Q96BV0 537 aaPredicted RBP18.61■□□□□ 0.57
LSM6-207ENST00000515311 ZNF570Q96NI8 536 aa18.61■□□□□ 0.57
LSM6-207ENST00000515311 ERMAPQ96PL5 475 aaPredicted RBP18.61■□□□□ 0.57
LSM6-207ENST00000515311 OR2M2Q96R28 347 aa18.61■□□□□ 0.57
LSM6-207ENST00000515311 RIBC2Q9H4K1 309 aa18.61■□□□□ 0.57
LSM6-207ENST00000515311 SLC35F4A4IF30 521 aa18.6■□□□□ 0.57
LSM6-207ENST00000515311 ZNF726A6NNF4 738 aa18.6■□□□□ 0.57
LSM6-207ENST00000515311 ZAR1LA6NP61 321 aa18.6■□□□□ 0.57
LSM6-207ENST00000515311 CENPBD1B2RD01 187 aa18.6■□□□□ 0.57
LSM6-207ENST00000515311 H0YJX3 145 aa18.6■□□□□ 0.57
LSM6-207ENST00000515311 SNAP29O95721 258 aa18.6■□□□□ 0.57
LSM6-207ENST00000515311 GRK5P34947 590 aa18.6■□□□□ 0.57
LSM6-207ENST00000515311 SMSP52788 366 aa18.6■□□□□ 0.57
LSM6-207ENST00000515311 GINS1Q14691 196 aa18.6■□□□□ 0.57
LSM6-207ENST00000515311 PTGES3Q15185 160 aaKnown RBP18.6■□□□□ 0.57
LSM6-207ENST00000515311 PGGHGQ32M88 737 aa18.6■□□□□ 0.57
LSM6-207ENST00000515311 MYO7BQ6PIF6 2116 aa18.6■□□□□ 0.57
LSM6-207ENST00000515311 CASP12Q6UXS9 341 aa18.6■□□□□ 0.57
LSM6-207ENST00000515311 NCCRP1Q6ZVX7 275 aaPredicted RBP18.6■□□□□ 0.57
LSM6-207ENST00000515311 NUFIP2Q7Z417 695 aaKnown RBP18.6■□□□□ 0.57
LSM6-207ENST00000515311 TMEM123Q8N131 208 aa18.6■□□□□ 0.57
LSM6-207ENST00000515311 PIP4P2Q8N4L2 257 aa18.6■□□□□ 0.57
LSM6-207ENST00000515311 OR4Q3Q8NH05 313 aa18.6■□□□□ 0.57
LSM6-207ENST00000515311 SLC25A44Q96H78 314 aaPredicted RBP18.6■□□□□ 0.57
LSM6-207ENST00000515311 Q96M85 177 aa18.6■□□□□ 0.57
LSM6-207ENST00000515311 MBOAT4Q96T53 435 aa18.6■□□□□ 0.57
LSM6-207ENST00000515311 TEX12Q9BXU0 123 aa18.6■□□□□ 0.57
LSM6-207ENST00000515311 TOR3AQ9H497 397 aa18.6■□□□□ 0.57
LSM6-207ENST00000515311 ZNF346Q9UL40 294 aaKnown RBP18.6■□□□□ 0.57
LSM6-207ENST00000515311 IER3IP1Q9Y5U9 82 aa18.6■□□□□ 0.57
LSM6-207ENST00000515311 NCOA6Q14686 2063 aaPredicted RBP18.6■□□□□ 0.57
LSM6-207ENST00000515311 UBR5O95071 2799 aaPredicted RBP18.59■□□□□ 0.57
LSM6-207ENST00000515311 OR6C65A6NJZ3 312 aa18.59■□□□□ 0.57
LSM6-207ENST00000515311 DLGAP1O14490 977 aa18.59■□□□□ 0.57
LSM6-207ENST00000515311 EPHA2P29317 976 aa18.59■□□□□ 0.57
LSM6-207ENST00000515311 NOS3P29474 1203 aa18.59■□□□□ 0.57
LSM6-207ENST00000515311 OR3A2P47893 321 aa18.59■□□□□ 0.57
LSM6-207ENST00000515311 SIRPAP78324 504 aa18.59■□□□□ 0.57
LSM6-207ENST00000515311 MELKQ14680 651 aa18.59■□□□□ 0.57
LSM6-207ENST00000515311 NIPAL3Q6P499 406 aa18.59■□□□□ 0.57
LSM6-207ENST00000515311 ADCK1Q86TW2 530 aa18.59■□□□□ 0.57
LSM6-207ENST00000515311 APH1AQ96BI3 265 aa18.59■□□□□ 0.57
LSM6-207ENST00000515311 STARD4Q96DR4 205 aa18.59■□□□□ 0.57
LSM6-207ENST00000515311 CCDC120Q96HB5 630 aa18.59■□□□□ 0.57
LSM6-207ENST00000515311 EMC6Q9BV81 110 aa18.59■□□□□ 0.57
LSM6-207ENST00000515311 GRIP2Q9C0E4 1043 aa18.59■□□□□ 0.57
LSM6-207ENST00000515311 SLC5A6Q9Y289 635 aa18.59■□□□□ 0.57
LSM6-207ENST00000515311 TEX13CA0A0J9YWL9 993 aa18.58■□□□□ 0.56
LSM6-207ENST00000515311 E9PQ18 207 aa18.58■□□□□ 0.56
LSM6-207ENST00000515311 AHCYL1O43865 530 aa18.58■□□□□ 0.56
LSM6-207ENST00000515311 SLC43A1O75387 559 aa18.58■□□□□ 0.56
LSM6-207ENST00000515311 IGHG1P01857 330 aa18.58■□□□□ 0.56
LSM6-207ENST00000515311 PGA4P0DJD7 388 aa18.58■□□□□ 0.56
LSM6-207ENST00000515311 PGA3P0DJD8 388 aa18.58■□□□□ 0.56
LSM6-207ENST00000515311 CD8BP10966 210 aa18.58■□□□□ 0.56
LSM6-207ENST00000515311 ACADSP16219 412 aa18.58■□□□□ 0.56
LSM6-207ENST00000515311 ACVR1BP36896 505 aa18.58■□□□□ 0.56
LSM6-207ENST00000515311 POLR2IP36954 125 aaKnown RBP18.58■□□□□ 0.56
LSM6-207ENST00000515311 SELENOPP49908 381 aa18.58■□□□□ 0.56
LSM6-207ENST00000515311 MYBPC1Q00872 1141 aa18.58■□□□□ 0.56
LSM6-207ENST00000515311 KRR1Q13601 381 aaKnown RBP18.58■□□□□ 0.56
LSM6-207ENST00000515311 SNCBQ16143 134 aa18.58■□□□□ 0.56
LSM6-207ENST00000515311 MESTQ5EB52 335 aa18.58■□□□□ 0.56
LSM6-207ENST00000515311 SLX4IPQ5VYV7 408 aa18.58■□□□□ 0.56
LSM6-207ENST00000515311 VWA1Q6PCB0 445 aa18.58■□□□□ 0.56
LSM6-207ENST00000515311 BTLAQ7Z6A9 289 aa18.58■□□□□ 0.56
LSM6-207ENST00000515311 ZNF100Q8IYN0 542 aa18.58■□□□□ 0.56
LSM6-207ENST00000515311 IQCF1Q8N6M8 205 aa18.58■□□□□ 0.56
LSM6-207ENST00000515311 ZNF566Q969W8 418 aa18.58■□□□□ 0.56
LSM6-207ENST00000515311 RASD2Q96D21 266 aa18.58■□□□□ 0.56
LSM6-207ENST00000515311 LRR1Q96L50 414 aa18.58■□□□□ 0.56
LSM6-207ENST00000515311 MRPL13Q9BYD1 178 aaKnown RBP18.58■□□□□ 0.56
LSM6-207ENST00000515311 PIGMQ9H3S5 423 aa18.58■□□□□ 0.56
LSM6-207ENST00000515311 PLSCR4Q9NRQ2 329 aa18.58■□□□□ 0.56
LSM6-207ENST00000515311 RNF6Q9Y252 685 aa18.58■□□□□ 0.56
LSM6-207ENST00000515311 MYO18BQ8IUG5 2567 aa18.58■□□□□ 0.56
LSM6-207ENST00000515311 XKRYO14609 159 aa18.57■□□□□ 0.56
LSM6-207ENST00000515311 DVL2O14641 736 aa18.57■□□□□ 0.56
LSM6-207ENST00000515311 CGAP01215 116 aa18.57■□□□□ 0.56
LSM6-207ENST00000515311 HMGN1P05114 100 aa18.57■□□□□ 0.56
LSM6-207ENST00000515311 VHLP40337 213 aa18.57■□□□□ 0.56
LSM6-207ENST00000515311 ADORA2A-AS1P86434 159 aa18.57■□□□□ 0.56
LSM6-207ENST00000515311 ZIK1Q3SY52 487 aaPredicted RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms