RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 KLK12Q9UKR0 248 aa3.2□□□□□ -1.9
HMGCS1-207ENST00000514610 FAM240BA0A1B0GVZ2 78 aa3.19□□□□□ -1.9
HMGCS1-207ENST00000514610 ANKRD63C9JTQ0 380 aa3.19□□□□□ -1.9
HMGCS1-207ENST00000514610 TMX2-CTNND1H3BSU7 103 aa3.19□□□□□ -1.9
HMGCS1-207ENST00000514610 PEX7O00628 323 aa3.19□□□□□ -1.9
HMGCS1-207ENST00000514610 SS18L1O75177 396 aaPredicted RBP3.19□□□□□ -1.9
HMGCS1-207ENST00000514610 TMEM50AO95807 157 aa3.19□□□□□ -1.9
HMGCS1-207ENST00000514610 SLC25A27O95847 323 aa3.19□□□□□ -1.9
HMGCS1-207ENST00000514610 PRB2P02812 416 aaPredicted RBP3.19□□□□□ -1.9
HMGCS1-207ENST00000514610 CSF3P09919 207 aa3.19□□□□□ -1.9
HMGCS1-207ENST00000514610 IGHV3-43DP0DP04 118 aa3.19□□□□□ -1.9
HMGCS1-207ENST00000514610 TCN1P20061 433 aaPredicted RBP3.19□□□□□ -1.9
HMGCS1-207ENST00000514610 CNR1P21554 472 aa3.19□□□□□ -1.9
HMGCS1-207ENST00000514610 SLC2A5P22732 501 aa3.19□□□□□ -1.9
HMGCS1-207ENST00000514610 CALRP27797 417 aaKnown RBP3.19□□□□□ -1.9
HMGCS1-207ENST00000514610 SLC26A3P40879 764 aa3.19□□□□□ -1.9
HMGCS1-207ENST00000514610 GPR6P46095 362 aaPredicted RBP3.19□□□□□ -1.9
HMGCS1-207ENST00000514610 C6orf120Q7Z4R8 191 aa3.19□□□□□ -1.9
HMGCS1-207ENST00000514610 CAMK2N1Q7Z7J9 78 aa3.19□□□□□ -1.9
HMGCS1-207ENST00000514610 ZNF786Q8N393 782 aa3.19□□□□□ -1.9
HMGCS1-207ENST00000514610 MCOLN3Q8TDD5 553 aa3.19□□□□□ -1.9
HMGCS1-207ENST00000514610 GIMAP1Q8WWP7 306 aa3.19□□□□□ -1.9
HMGCS1-207ENST00000514610 TUBGCP3Q96CW5 907 aa3.19□□□□□ -1.9
HMGCS1-207ENST00000514610 TMEM59Q9BXS4 323 aa3.19□□□□□ -1.9
HMGCS1-207ENST00000514610 METTL7AQ9H8H3 244 aa3.19□□□□□ -1.9
HMGCS1-207ENST00000514610 MRPL47Q9HD33 250 aaKnown RBP3.19□□□□□ -1.9
HMGCS1-207ENST00000514610 EXD2Q9NVH0 621 aa3.19□□□□□ -1.9
HMGCS1-207ENST00000514610 ZNF226Q9NYT6 803 aa3.19□□□□□ -1.9
HMGCS1-207ENST00000514610 MSH6P52701 1360 aa3.18□□□□□ -1.9
HMGCS1-207ENST00000514610 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.18□□□□□ -1.9
HMGCS1-207ENST00000514610 PPIAL4EA0A075B759 164 aa3.18□□□□□ -1.9
HMGCS1-207ENST00000514610 A0A096LNJ9 63 aa3.18□□□□□ -1.9
HMGCS1-207ENST00000514610 IGKV6D-21A0A0A0MT36 114 aa3.18□□□□□ -1.9
HMGCS1-207ENST00000514610 C11orf94C9JXX5 98 aa3.18□□□□□ -1.9
HMGCS1-207ENST00000514610 CCL21O00585 134 aa3.18□□□□□ -1.9
HMGCS1-207ENST00000514610 PPIAL4FP0DN26 164 aa3.18□□□□□ -1.9
HMGCS1-207ENST00000514610 HPGDP15428 266 aa3.18□□□□□ -1.9
HMGCS1-207ENST00000514610 KITLGP21583 273 aa3.18□□□□□ -1.9
HMGCS1-207ENST00000514610 HOXA9P31269 272 aa3.18□□□□□ -1.9
HMGCS1-207ENST00000514610 ATP5C1P36542 298 aaKnown RBP3.18□□□□□ -1.9
HMGCS1-207ENST00000514610 CXCL5P42830 114 aa3.18□□□□□ -1.9
HMGCS1-207ENST00000514610 SUB1P53999 127 aaKnown RBP eCLIP3.18□□□□□ -1.9
HMGCS1-207ENST00000514610 TMEM255AQ5JRV8 349 aa3.18□□□□□ -1.9
HMGCS1-207ENST00000514610 LINC00173Q6ZV60 143 aa3.18□□□□□ -1.9
HMGCS1-207ENST00000514610 NBPF5PQ86XG9 351 aaPredicted RBP3.18□□□□□ -1.9
HMGCS1-207ENST00000514610 FBXO32Q969P5 355 aa3.18□□□□□ -1.9
HMGCS1-207ENST00000514610 SGK3Q96BR1 496 aa3.18□□□□□ -1.9
HMGCS1-207ENST00000514610 ASB9Q96DX5 294 aa3.18□□□□□ -1.9
HMGCS1-207ENST00000514610 MED8Q96G25 268 aa3.18□□□□□ -1.9
HMGCS1-207ENST00000514610 HSFY1Q96LI6 401 aa3.18□□□□□ -1.9
HMGCS1-207ENST00000514610 RARRES2Q99969 163 aa3.18□□□□□ -1.9
HMGCS1-207ENST00000514610 MFFQ9GZY8 342 aa3.18□□□□□ -1.9
HMGCS1-207ENST00000514610 PRO0461Q9UI25 63 aa3.18□□□□□ -1.9
HMGCS1-207ENST00000514610 PACSIN2Q9UNF0 486 aaPredicted RBP3.18□□□□□ -1.9
HMGCS1-207ENST00000514610 KANK1Q14678 1352 aa3.17□□□□□ -1.9
HMGCS1-207ENST00000514610 A0A1B0GVI7 797 aa3.17□□□□□ -1.9
HMGCS1-207ENST00000514610 ZNF726A6NNF4 738 aa3.17□□□□□ -1.9
HMGCS1-207ENST00000514610 SNAI2O43623 268 aa3.17□□□□□ -1.9
HMGCS1-207ENST00000514610 CD5LO43866 347 aa3.17□□□□□ -1.9
HMGCS1-207ENST00000514610 MGRN1O60291 552 aa3.17□□□□□ -1.9
HMGCS1-207ENST00000514610 PNMA6AP0CW24 399 aaPredicted RBP3.17□□□□□ -1.9
HMGCS1-207ENST00000514610 ADRB3P13945 408 aa3.17□□□□□ -1.9
HMGCS1-207ENST00000514610 ZNF30P17039 623 aa3.17□□□□□ -1.9
HMGCS1-207ENST00000514610 ZNF32P17041 273 aa3.17□□□□□ -1.9
HMGCS1-207ENST00000514610 NCF2P19878 526 aaPredicted RBP3.17□□□□□ -1.9
HMGCS1-207ENST00000514610 HNRNPH3P31942 346 aaKnown RBP3.17□□□□□ -1.9
HMGCS1-207ENST00000514610 HSD17B2P37059 387 aa3.17□□□□□ -1.9
HMGCS1-207ENST00000514610 SSR1P43307 286 aaKnown RBP3.17□□□□□ -1.9
HMGCS1-207ENST00000514610 NCBP2P52298 156 aaKnown RBP eCLIP3.17□□□□□ -1.9
HMGCS1-207ENST00000514610 FBXW4P57775 412 aa3.17□□□□□ -1.9
HMGCS1-207ENST00000514610 PLP1P60201 277 aa3.17□□□□□ -1.9
HMGCS1-207ENST00000514610 AQP6Q13520 282 aa3.17□□□□□ -1.9
HMGCS1-207ENST00000514610 TMEM183BQ1AE95 376 aa3.17□□□□□ -1.9
HMGCS1-207ENST00000514610 LYPD2Q6UXB3 125 aa3.17□□□□□ -1.9
HMGCS1-207ENST00000514610 KDM7AQ6ZMT4 941 aa3.17□□□□□ -1.9
HMGCS1-207ENST00000514610 LRRC74BQ6ZQY2 392 aa3.17□□□□□ -1.9
HMGCS1-207ENST00000514610 C19orf35Q6ZS72 473 aa3.17□□□□□ -1.9
HMGCS1-207ENST00000514610 ASCL5Q7RTU5 278 aa3.17□□□□□ -1.9
HMGCS1-207ENST00000514610 LHFPL3Q86UP9 236 aa3.17□□□□□ -1.9
HMGCS1-207ENST00000514610 TMEM183AQ8IXX5 376 aa3.17□□□□□ -1.9
HMGCS1-207ENST00000514610 DUSP18Q8NEJ0 188 aa3.17□□□□□ -1.9
HMGCS1-207ENST00000514610 CCDC54Q8NEL0 328 aa3.17□□□□□ -1.9
HMGCS1-207ENST00000514610 OR2G2Q8NGZ5 317 aa3.17□□□□□ -1.9
HMGCS1-207ENST00000514610 SLC22A8Q8TCC7 542 aa3.17□□□□□ -1.9
HMGCS1-207ENST00000514610 DNAJC19Q96DA6 116 aa3.17□□□□□ -1.9
HMGCS1-207ENST00000514610 AURKBQ96GD4 344 aaPredicted RBP3.17□□□□□ -1.9
HMGCS1-207ENST00000514610 IFT74Q96LB3 600 aa3.17□□□□□ -1.9
HMGCS1-207ENST00000514610 PLA2G2FQ9BZM2 168 aa3.17□□□□□ -1.9
HMGCS1-207ENST00000514610 MYOZ2Q9NPC6 264 aa3.17□□□□□ -1.9
HMGCS1-207ENST00000514610 CTPS2Q9NRF8 586 aa3.17□□□□□ -1.9
HMGCS1-207ENST00000514610 PCYOX1Q9UHG3 505 aa3.17□□□□□ -1.9
HMGCS1-207ENST00000514610 RAB26Q9ULW5 256 aa3.17□□□□□ -1.9
HMGCS1-207ENST00000514610 ARID1AO14497 2285 aa3.16□□□□□ -1.9
HMGCS1-207ENST00000514610 IGLV3-16A0A075B6K0 115 aa3.16□□□□□ -1.9
HMGCS1-207ENST00000514610 PLAC8L1A1L4L8 177 aa3.16□□□□□ -1.9
HMGCS1-207ENST00000514610 MPHOSPH10O00566 681 aaKnown RBP3.16□□□□□ -1.9
HMGCS1-207ENST00000514610 GOSR2O14653 212 aa3.16□□□□□ -1.9
HMGCS1-207ENST00000514610 PSTPIP1O43586 416 aa3.16□□□□□ -1.9
HMGCS1-207ENST00000514610 CRYBB2P43320 205 aa3.16□□□□□ -1.9
HMGCS1-207ENST00000514610 ZNF136P52737 540 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms