RNA–Protein interactions for RNA: ENST00000514402.1

MATR3-223, Transcript of matrin 3, humanhuman

TSL 2

Gene MATR3, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-223ENST00000514402 RHBDD3Q9Y3P4 386 aa2.4□□□□□ -2.03
MATR3-223ENST00000514402 MAD1L1Q9Y6D9 718 aa2.4□□□□□ -2.03
MATR3-223ENST00000514402 MAP3K19Q56UN5 1328 aa2.4□□□□□ -2.03
MATR3-223ENST00000514402 A0A1W2PNV4 684 aa2.39□□□□□ -2.03
MATR3-223ENST00000514402 A0A1W2PPE3 182 aa2.39□□□□□ -2.03
MATR3-223ENST00000514402 A0A1W2PQ67 120 aa2.39□□□□□ -2.03
MATR3-223ENST00000514402 OR6C74A6NCV1 312 aa2.39□□□□□ -2.03
MATR3-223ENST00000514402 HSBP1L1C9JCN9 74 aa2.39□□□□□ -2.03
MATR3-223ENST00000514402 YKT6O15498 198 aa2.39□□□□□ -2.03
MATR3-223ENST00000514402 RS1O15537 224 aa2.39□□□□□ -2.03
MATR3-223ENST00000514402 E2F6O75461 281 aa2.39□□□□□ -2.03
MATR3-223ENST00000514402 FOXH1O75593 365 aa2.39□□□□□ -2.03
MATR3-223ENST00000514402 F10P00742 488 aa2.39□□□□□ -2.03
MATR3-223ENST00000514402 CA1P00915 261 aaPredicted RBP2.39□□□□□ -2.03
MATR3-223ENST00000514402 MBP02144 154 aa2.39□□□□□ -2.03
MATR3-223ENST00000514402 GAPDHP04406 335 aaKnown RBP2.39□□□□□ -2.03
MATR3-223ENST00000514402 ERCC1P07992 297 aaPredicted RBP2.39□□□□□ -2.03
MATR3-223ENST00000514402 HBQ1P09105 142 aa2.39□□□□□ -2.03
MATR3-223ENST00000514402 CLTAP09496 248 aa2.39□□□□□ -2.03
MATR3-223ENST00000514402 MCF2P10911 925 aa2.39□□□□□ -2.03
MATR3-223ENST00000514402 ADRB3P13945 408 aa2.39□□□□□ -2.03
MATR3-223ENST00000514402 CCNB1P14635 433 aa2.39□□□□□ -2.03
MATR3-223ENST00000514402 RCC1P18754 421 aaPredicted RBP2.39□□□□□ -2.03
MATR3-223ENST00000514402 PGCP20142 388 aa2.39□□□□□ -2.03
MATR3-223ENST00000514402 HMGB2P26583 209 aaKnown RBP2.39□□□□□ -2.03
MATR3-223ENST00000514402 CD1CP29017 333 aa2.39□□□□□ -2.03
MATR3-223ENST00000514402 PLK1P53350 603 aa2.39□□□□□ -2.03
MATR3-223ENST00000514402 PLP1P60201 277 aa2.39□□□□□ -2.03
MATR3-223ENST00000514402 RAB11AP62491 216 aa2.39□□□□□ -2.03
MATR3-223ENST00000514402 OGDHQ02218 1023 aa2.39□□□□□ -2.03
MATR3-223ENST00000514402 PAX5Q02548 391 aa2.39□□□□□ -2.03
MATR3-223ENST00000514402 SLC10A7Q0GE19 358 aa2.39□□□□□ -2.03
MATR3-223ENST00000514402 TRDNQ13061 729 aa2.39□□□□□ -2.03
MATR3-223ENST00000514402 NSDHLQ15738 373 aa2.39□□□□□ -2.03
MATR3-223ENST00000514402 RAB11BQ15907 218 aa2.39□□□□□ -2.03
MATR3-223ENST00000514402 HNRNPA1L2Q32P51 320 aaKnown RBP2.39□□□□□ -2.03
MATR3-223ENST00000514402 CASC10Q5T4H9 136 aa2.39□□□□□ -2.03
MATR3-223ENST00000514402 SLC8B1Q6J4K2 584 aa2.39□□□□□ -2.03
MATR3-223ENST00000514402 ACSM5Q6NUN0 579 aa2.39□□□□□ -2.03
MATR3-223ENST00000514402 ARCQ7LC44 396 aa2.39□□□□□ -2.03
MATR3-223ENST00000514402 FAM220AQ7Z4H9 259 aa2.39□□□□□ -2.03
MATR3-223ENST00000514402 MOB3BQ86TA1 216 aa2.39□□□□□ -2.03
MATR3-223ENST00000514402 ZNF561Q8N587 486 aa2.39□□□□□ -2.03
MATR3-223ENST00000514402 ASCC1Q8N9N2 400 aaKnown RBP2.39□□□□□ -2.03
MATR3-223ENST00000514402 OR52I1Q8NGK6 324 aa2.39□□□□□ -2.03
MATR3-223ENST00000514402 GPX8Q8TED1 209 aa2.39□□□□□ -2.03
MATR3-223ENST00000514402 MITD1Q8WV92 249 aa2.39□□□□□ -2.03
MATR3-223ENST00000514402 PIBF1Q8WXW3 757 aa2.39□□□□□ -2.03
MATR3-223ENST00000514402 NRGNQ92686 78 aa2.39□□□□□ -2.03
MATR3-223ENST00000514402 SLC38A4Q969I6 547 aa2.39□□□□□ -2.03
MATR3-223ENST00000514402 NRBF2Q96F24 287 aa2.39□□□□□ -2.03
MATR3-223ENST00000514402 TIMD4Q96H15 378 aa2.39□□□□□ -2.03
MATR3-223ENST00000514402 TGS1Q96RS0 853 aaKnown RBP2.39□□□□□ -2.03
MATR3-223ENST00000514402 RTBDNQ9BSG5 229 aaPredicted RBP2.39□□□□□ -2.03
MATR3-223ENST00000514402 TUBGCP2Q9BSJ2 902 aa2.39□□□□□ -2.03
MATR3-223ENST00000514402 SPATA16Q9BXB7 569 aa2.39□□□□□ -2.03
MATR3-223ENST00000514402 C8orf33Q9H7E9 229 aaPredicted RBP2.39□□□□□ -2.03
MATR3-223ENST00000514402 C20orf96Q9NUD7 363 aaPredicted RBP2.39□□□□□ -2.03
MATR3-223ENST00000514402 NECAP2Q9NVZ3 263 aa2.39□□□□□ -2.03
MATR3-223ENST00000514402 PAK1IP1Q9NWT1 392 aaPredicted RBP2.39□□□□□ -2.03
MATR3-223ENST00000514402 SIGLEC8Q9NYZ4 499 aa2.39□□□□□ -2.03
MATR3-223ENST00000514402 PSMC3IPQ9P2W1 217 aaPredicted RBP2.39□□□□□ -2.03
MATR3-223ENST00000514402 ZNF223Q9UK11 482 aaPredicted RBP2.39□□□□□ -2.03
MATR3-223ENST00000514402 NEUROG3Q9Y4Z2 214 aa2.39□□□□□ -2.03
MATR3-223ENST00000514402 GMEB1Q9Y692 573 aa2.39□□□□□ -2.03
MATR3-223ENST00000514402 V9GYY5 206 aaPredicted RBP2.39□□□□□ -2.03
MATR3-223ENST00000514402 MTCL1Q9Y4B5 1905 aaKnown RBP2.38□□□□□ -2.03
MATR3-223ENST00000514402 IGLV4-69A0A075B6H9 119 aa2.38□□□□□ -2.03
MATR3-223ENST00000514402 A6NDX4 124 aa2.38□□□□□ -2.03
MATR3-223ENST00000514402 C12orf71A8MTZ7 269 aa2.38□□□□□ -2.03
MATR3-223ENST00000514402 ANKRD63C9JTQ0 380 aa2.38□□□□□ -2.03
MATR3-223ENST00000514402 G3V4G9 280 aa2.38□□□□□ -2.03
MATR3-223ENST00000514402 K7ERQ8 282 aa2.38□□□□□ -2.03
MATR3-223ENST00000514402 TRDMT1O14717 391 aaKnown RBP2.38□□□□□ -2.03
MATR3-223ENST00000514402 EIF3HO15372 352 aaKnown RBP eCLIP2.38□□□□□ -2.03
MATR3-223ENST00000514402 MSH4O15457 936 aa2.38□□□□□ -2.03
MATR3-223ENST00000514402 RRP8O43159 456 aaKnown RBP2.38□□□□□ -2.03
MATR3-223ENST00000514402 OR2F2O95006 317 aa2.38□□□□□ -2.03
MATR3-223ENST00000514402 DIRAS1O95057 198 aa2.38□□□□□ -2.03
MATR3-223ENST00000514402 CLDN9O95484 217 aa2.38□□□□□ -2.03
MATR3-223ENST00000514402 GNA14O95837 355 aa2.38□□□□□ -2.03
MATR3-223ENST00000514402 LALBAP00709 142 aa2.38□□□□□ -2.03
MATR3-223ENST00000514402 MMP1P03956 469 aa2.38□□□□□ -2.03
MATR3-223ENST00000514402 P04436 131 aa2.38□□□□□ -2.03
MATR3-223ENST00000514402 OTX1P32242 354 aaPredicted RBP2.38□□□□□ -2.03
MATR3-223ENST00000514402 DEKP35659 375 aaKnown RBP2.38□□□□□ -2.03
MATR3-223ENST00000514402 RPL13AP40429 203 aaKnown RBP2.38□□□□□ -2.03
MATR3-223ENST00000514402 CRYBB2P43320 205 aa2.38□□□□□ -2.03
MATR3-223ENST00000514402 GYG1P46976 350 aa2.38□□□□□ -2.03
MATR3-223ENST00000514402 DUSP3P51452 185 aaPredicted RBP2.38□□□□□ -2.03
MATR3-223ENST00000514402 EFNB2P52799 333 aa2.38□□□□□ -2.03
MATR3-223ENST00000514402 DAOAP59103 153 aa2.38□□□□□ -2.03
MATR3-223ENST00000514402 RGS1Q08116 209 aa2.38□□□□□ -2.03
MATR3-223ENST00000514402 ARFRP1Q13795 201 aa2.38□□□□□ -2.03
MATR3-223ENST00000514402 NDUFA9Q16795 377 aa2.38□□□□□ -2.03
MATR3-223ENST00000514402 ZNF829Q3KNS6 432 aaPredicted RBP2.38□□□□□ -2.03
MATR3-223ENST00000514402 SLC25A52Q3SY17 297 aa2.38□□□□□ -2.03
MATR3-223ENST00000514402 DMRTC1Q5HYR2 192 aa2.38□□□□□ -2.03
MATR3-223ENST00000514402 DEGS2Q6QHC5 323 aa2.38□□□□□ -2.03
MATR3-223ENST00000514402 HSDL2Q6YN16 418 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms