RNA–Protein interactions for RNA: ENST00000514313.1

NUP54-215, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-215ENST00000514313 LRRIQ3A6PVS8 624 aaPredicted RBP5.26□□□□□ -1.57
NUP54-215ENST00000514313 E7ENQ6 273 aa5.26□□□□□ -1.57
NUP54-215ENST00000514313 CHST1O43916 411 aa5.26□□□□□ -1.57
NUP54-215ENST00000514313 MGRN1O60291 552 aa5.26□□□□□ -1.57
NUP54-215ENST00000514313 MMP23AO75900 390 aa5.26□□□□□ -1.57
NUP54-215ENST00000514313 STAG3L3P0CL85 134 aa5.26□□□□□ -1.57
NUP54-215ENST00000514313 RPS5P46782 204 aaKnown RBP5.26□□□□□ -1.57
NUP54-215ENST00000514313 RAB9AP51151 201 aa5.26□□□□□ -1.57
NUP54-215ENST00000514313 YWHAGP61981 247 aaKnown RBP eCLIP5.26□□□□□ -1.57
NUP54-215ENST00000514313 ILKQ13418 452 aa5.26□□□□□ -1.57
NUP54-215ENST00000514313 GPNMBQ14956 572 aa5.26□□□□□ -1.57
NUP54-215ENST00000514313 SPINK14Q6IE38 97 aa5.26□□□□□ -1.57
NUP54-215ENST00000514313 SLC16A14Q7RTX9 510 aa5.26□□□□□ -1.57
NUP54-215ENST00000514313 TMCO2Q7Z6W1 182 aaPredicted RBP5.26□□□□□ -1.57
NUP54-215ENST00000514313 COMMD1Q8N668 190 aa5.26□□□□□ -1.57
NUP54-215ENST00000514313 EID2Q8N6I1 236 aa5.26□□□□□ -1.57
NUP54-215ENST00000514313 FBXL13Q8NEE6 735 aa5.26□□□□□ -1.57
NUP54-215ENST00000514313 PIBF1Q8WXW3 757 aa5.26□□□□□ -1.57
NUP54-215ENST00000514313 MED8Q96G25 268 aa5.26□□□□□ -1.57
NUP54-215ENST00000514313 FCRL1Q96LA6 429 aa5.26□□□□□ -1.57
NUP54-215ENST00000514313 SRMSQ9H3Y6 488 aa5.26□□□□□ -1.57
NUP54-215ENST00000514313 RANBP3Q9H6Z4 567 aaPredicted RBP5.26□□□□□ -1.57
NUP54-215ENST00000514313 CWH43Q9H720 699 aa5.26□□□□□ -1.57
NUP54-215ENST00000514313 CNTNAP1P78357 1384 aa5.26□□□□□ -1.57
NUP54-215ENST00000514313 USP47Q96K76 1375 aa5.26□□□□□ -1.57
NUP54-215ENST00000514313 ERVV-1B6SEH8 477 aa5.25□□□□□ -1.57
NUP54-215ENST00000514313 TEX46H3BTG2 121 aa5.25□□□□□ -1.57
NUP54-215ENST00000514313 AIM2O14862 343 aa5.25□□□□□ -1.57
NUP54-215ENST00000514313 ERCC1P07992 297 aaPredicted RBP5.25□□□□□ -1.57
NUP54-215ENST00000514313 DCKP27707 260 aa5.25□□□□□ -1.57
NUP54-215ENST00000514313 CSNK1EP49674 416 aaKnown RBP5.25□□□□□ -1.57
NUP54-215ENST00000514313 STX17P56962 302 aa5.25□□□□□ -1.57
NUP54-215ENST00000514313 LIPEQ05469 1076 aa5.25□□□□□ -1.57
NUP54-215ENST00000514313 SELENBP1Q13228 472 aa5.25□□□□□ -1.57
NUP54-215ENST00000514313 NSDHLQ15738 373 aa5.25□□□□□ -1.57
NUP54-215ENST00000514313 SOHLH1Q5JUK2 328 aa5.25□□□□□ -1.57
NUP54-215ENST00000514313 VAX1Q5SQQ9 334 aa5.25□□□□□ -1.57
NUP54-215ENST00000514313 CTRB2Q6GPI1 263 aa5.25□□□□□ -1.57
NUP54-215ENST00000514313 CNIH2Q6PI25 160 aa5.25□□□□□ -1.57
NUP54-215ENST00000514313 RALGPS2Q86X27 583 aaPredicted RBP5.25□□□□□ -1.57
NUP54-215ENST00000514313 GABRG1Q8N1C3 465 aa5.25□□□□□ -1.57
NUP54-215ENST00000514313 FAM151AQ8WW52 585 aa5.25□□□□□ -1.57
NUP54-215ENST00000514313 UGT1A10Q9HAW8 530 aa5.25□□□□□ -1.57
NUP54-215ENST00000514313 RPRD1BQ9NQG5 326 aaKnown RBP5.25□□□□□ -1.57
NUP54-215ENST00000514313 PDP1Q9P0J1 537 aaPredicted RBP5.25□□□□□ -1.57
NUP54-215ENST00000514313 TBC1D24Q9ULP9 559 aa5.25□□□□□ -1.57
NUP54-215ENST00000514313 PACSIN2Q9UNF0 486 aaPredicted RBP5.25□□□□□ -1.57
NUP54-215ENST00000514313 CDH10Q9Y6N8 788 aa5.25□□□□□ -1.57
NUP54-215ENST00000514313 C12orf71A8MTZ7 269 aa5.24□□□□□ -1.57
NUP54-215ENST00000514313 SUPT3HB4E1H0 165 aa5.24□□□□□ -1.57
NUP54-215ENST00000514313 DYNC1I1O14576 645 aa5.24□□□□□ -1.57
NUP54-215ENST00000514313 SUPT7LO94864 414 aa5.24□□□□□ -1.57
NUP54-215ENST00000514313 GTF2E2P29084 291 aaKnown RBP5.24□□□□□ -1.57
NUP54-215ENST00000514313 GPR6P46095 362 aaPredicted RBP5.24□□□□□ -1.57
NUP54-215ENST00000514313 SUB1P53999 127 aaKnown RBP eCLIP5.24□□□□□ -1.57
NUP54-215ENST00000514313 KRTAP10-9P60411 292 aa5.24□□□□□ -1.57
NUP54-215ENST00000514313 PRPS1P60891 318 aa5.24□□□□□ -1.57
NUP54-215ENST00000514313 KIAA0087Q14695 138 aa5.24□□□□□ -1.57
NUP54-215ENST00000514313 HERPUD1Q15011 391 aa5.24□□□□□ -1.57
NUP54-215ENST00000514313 CASC10Q5T4H9 136 aa5.24□□□□□ -1.57
NUP54-215ENST00000514313 C22orf42Q6IC83 251 aa5.24□□□□□ -1.57
NUP54-215ENST00000514313 REEP3Q6NUK4 255 aa5.24□□□□□ -1.57
NUP54-215ENST00000514313 IL34Q6ZMJ4 242 aa5.24□□□□□ -1.57
NUP54-215ENST00000514313 CCDC73Q6ZRK6 1079 aa5.24□□□□□ -1.57
NUP54-215ENST00000514313 TMEM61Q8N0U2 210 aa5.24□□□□□ -1.57
NUP54-215ENST00000514313 PDIK1LQ8N165 341 aa5.24□□□□□ -1.57
NUP54-215ENST00000514313 LYG1Q8N1E2 194 aa5.24□□□□□ -1.57
NUP54-215ENST00000514313 UCN3Q969E3 161 aa5.24□□□□□ -1.57
NUP54-215ENST00000514313 B3GALT6Q96L58 329 aa5.24□□□□□ -1.57
NUP54-215ENST00000514313 MAGEB18Q96M61 343 aa5.24□□□□□ -1.57
NUP54-215ENST00000514313 ROGDIQ9GZN7 287 aa5.24□□□□□ -1.57
NUP54-215ENST00000514313 DEFB127Q9H1M4 99 aa5.24□□□□□ -1.57
NUP54-215ENST00000514313 EXD2Q9NVH0 621 aa5.24□□□□□ -1.57
NUP54-215ENST00000514313 GPATCH2LQ9NWQ4 482 aa5.24□□□□□ -1.57
NUP54-215ENST00000514313 NEUROG3Q9Y4Z2 214 aa5.24□□□□□ -1.57
NUP54-215ENST00000514313 H0YC42 278 aa5.23□□□□□ -1.57
NUP54-215ENST00000514313 HDAC3O15379 428 aa5.23□□□□□ -1.57
NUP54-215ENST00000514313 EEDO75530 441 aaKnown RBP5.23□□□□□ -1.57
NUP54-215ENST00000514313 CHTF8P0CG12 524 aa5.23□□□□□ -1.57
NUP54-215ENST00000514313 GABRR1P24046 479 aa5.23□□□□□ -1.57
NUP54-215ENST00000514313 NAMPTP43490 491 aa5.23□□□□□ -1.57
NUP54-215ENST00000514313 CAV2P51636 162 aa5.23□□□□□ -1.57
NUP54-215ENST00000514313 NRF1Q16656 503 aa5.23□□□□□ -1.57
NUP54-215ENST00000514313 PPM1LQ5SGD2 360 aa5.23□□□□□ -1.57
NUP54-215ENST00000514313 SSX9Q7RTT3 188 aa5.23□□□□□ -1.57
NUP54-215ENST00000514313 LIX1Q8N485 282 aa5.23□□□□□ -1.57
NUP54-215ENST00000514313 PNKDQ8N490 385 aa5.23□□□□□ -1.57
NUP54-215ENST00000514313 ZADH2Q8N4Q0 377 aa5.23□□□□□ -1.57
NUP54-215ENST00000514313 VN1R2Q8NFZ6 395 aa5.23□□□□□ -1.57
NUP54-215ENST00000514313 OR5B3Q8NH48 314 aa5.23□□□□□ -1.57
NUP54-215ENST00000514313 RHEBL1Q8TAI7 183 aa5.23□□□□□ -1.57
NUP54-215ENST00000514313 SLC7A13Q8TCU3 470 aa5.23□□□□□ -1.57
NUP54-215ENST00000514313 TMEM101Q96IK0 257 aa5.23□□□□□ -1.57
NUP54-215ENST00000514313 PRRC1Q96M27 445 aa5.23□□□□□ -1.57
NUP54-215ENST00000514313 TEKT3Q9BXF9 490 aa5.23□□□□□ -1.57
NUP54-215ENST00000514313 PLSCR3Q9NRY6 295 aa5.23□□□□□ -1.57
NUP54-215ENST00000514313 C20orf96Q9NUD7 363 aaPredicted RBP5.23□□□□□ -1.57
NUP54-215ENST00000514313 LYARQ9NX58 379 aaKnown RBP5.23□□□□□ -1.57
NUP54-215ENST00000514313 XCL2Q9UBD3 114 aa5.23□□□□□ -1.57
NUP54-215ENST00000514313 MTRF1LQ9UGC7 380 aaKnown RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms