RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 IGHV2-70P01814 119 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 IGHEP01854 428 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 CHRM5P08912 532 aaPredicted RBP6.73□□□□□ -1.33
CLIP1-205ENST00000514271 FAM157CP0CG43 387 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 FGF5P12034 268 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 CSF2RBP32927 897 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 CRATP43155 626 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 CAPZA2P47755 286 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 UCNP55089 124 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 HSD11B2P80365 405 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 UBE2NLQ5JXB2 153 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 DCST1Q5T197 706 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 UQCC3Q6UW78 93 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 TMPRSS11FQ6ZWK6 438 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 LINGO2Q7L985 606 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 SLC43A2Q8N370 569 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 ARHGEF39Q8N4T4 335 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 TMEM99Q8N816 258 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 OR6S1Q8NH40 331 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 EAF1Q96JC9 268 aaPredicted RBP6.73□□□□□ -1.33
CLIP1-205ENST00000514271 CCDC74BQ96LY2 380 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 CLUHP3Q96NS8 147 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 SEC22CQ9BRL7 303 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 FSCN3Q9NQT6 498 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 POLE3Q9NRF9 147 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 PMS2P1A4D2B8 440 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 NAP1L6A6NFF2 107 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 WIPF3A6NGB9 483 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 ONECUT2O95948 504 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 PLATP00750 562 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 IGHV2-5P01817 119 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 CELA2BP08218 269 aaPredicted RBP6.73□□□□□ -1.33
CLIP1-205ENST00000514271 C1GALT1C1LP0DN25 315 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 IFI30P13284 250 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 AQP1P29972 269 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 ARL4DP49703 201 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 HTD2P86397 168 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 MXD1Q05195 221 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 IL15RAQ13261 267 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 PNLIPRP3Q17RR3 467 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 SLC22A25Q6T423 547 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 NXPE4Q6UWF7 544 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 OR6V1Q8N148 313 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 OR2L13Q8N349 312 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 BBS10Q8TAM1 723 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 ABHD4Q8TB40 342 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 POC1BQ8TC44 478 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 XAGE5Q8WWM1 108 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 PHYHIPQ92561 330 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 MVB12AQ96EY5 273 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 PHYHIPLQ96FC7 376 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 AMDHD1Q96NU7 426 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 DPH1Q9BZG8 443 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 DPAGT1Q9H3H5 408 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 XKR8Q9H6D3 395 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 CUTCQ9NTM9 273 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 EXTL2Q9UBQ6 330 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 NDRG3Q9UGV2 375 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 CBY1Q9Y3M2 126 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 DYRK1BQ9Y463 629 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 PLEKHM1Q9Y4G2 1056 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 BLACEA4D250 179 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 CEACAM18A8MTB9 384 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 GABARAPH6UMI1 98 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 TMPRSS11DO60235 418 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 SHC1P29353 583 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 ARL1P40616 181 aaPredicted RBP6.73□□□□□ -1.33
CLIP1-205ENST00000514271 CCR6P51684 374 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 RPS15AP62244 130 aaKnown RBP6.73□□□□□ -1.33
CLIP1-205ENST00000514271 RPS4XP62701 263 aaKnown RBP6.73□□□□□ -1.33
CLIP1-205ENST00000514271 ZNF267Q14586 743 aaPredicted RBP6.73□□□□□ -1.33
CLIP1-205ENST00000514271 FDX2Q6P4F2 183 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 PAQR7Q86WK9 346 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 SYS1Q8N2H4 156 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 LILRA3Q8N6C8 439 aaPredicted RBP6.73□□□□□ -1.33
CLIP1-205ENST00000514271 OR2I1PQ8NGU4 316 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 SNIP1Q8TAD8 396 aaKnown RBP6.73□□□□□ -1.33
CLIP1-205ENST00000514271 FANK1Q8TC84 345 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 SLC25A28Q96A46 364 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 HS3ST6Q96QI5 342 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 MTERF1Q99551 399 aaKnown RBP6.73□□□□□ -1.33
CLIP1-205ENST00000514271 HRASLS2Q9NWW9 162 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 IMPAD1Q9NX62 359 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 ING4Q9UNL4 249 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 PLCL2Q9UPR0 1127 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 MAB21L2Q9Y586 359 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 OTOGLQ3ZCN5 2332 aa6.72□□□□□ -1.33
CLIP1-205ENST00000514271 FAM240BA0A1B0GVZ2 78 aa6.72□□□□□ -1.33
CLIP1-205ENST00000514271 ANXA2P2A6NMY6 339 aa6.72□□□□□ -1.33
CLIP1-205ENST00000514271 UBE2CO00762 179 aa6.72□□□□□ -1.33
CLIP1-205ENST00000514271 IL2RAP01589 272 aa6.72□□□□□ -1.33
CLIP1-205ENST00000514271 TFP02787 698 aa6.72□□□□□ -1.33
CLIP1-205ENST00000514271 IL3P08700 152 aa6.72□□□□□ -1.33
CLIP1-205ENST00000514271 HTR2AP28223 471 aa6.72□□□□□ -1.33
CLIP1-205ENST00000514271 SLC6A9P48067 706 aa6.72□□□□□ -1.33
CLIP1-205ENST00000514271 FGL1Q08830 312 aa6.72□□□□□ -1.33
CLIP1-205ENST00000514271 ECH1Q13011 328 aa6.72□□□□□ -1.33
CLIP1-205ENST00000514271 PDSS1Q5T2R2 415 aa6.72□□□□□ -1.33
CLIP1-205ENST00000514271 UTS2BQ765I0 119 aa6.72□□□□□ -1.33
CLIP1-205ENST00000514271 RNF44Q7L0R7 432 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms