RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 PAQR8Q8TEZ7 354 aa13.46□□□□□ -0.26
VCAN-211ENST00000513984 NXPE2Q96DL1 559 aa13.46□□□□□ -0.26
VCAN-211ENST00000513984 SMIM19Q96E16 107 aa13.46□□□□□ -0.26
VCAN-211ENST00000513984 CEP19Q96LK0 163 aa13.46□□□□□ -0.26
VCAN-211ENST00000513984 MNTQ99583 582 aa13.46□□□□□ -0.26
VCAN-211ENST00000513984 ANGPTL4Q9BY76 406 aa13.46□□□□□ -0.26
VCAN-211ENST00000513984 PTGES2Q9H7Z7 377 aa13.46□□□□□ -0.26
VCAN-211ENST00000513984 CHST11Q9NPF2 352 aa13.46□□□□□ -0.26
VCAN-211ENST00000513984 FANCFQ9NPI8 374 aa13.46□□□□□ -0.26
VCAN-211ENST00000513984 ALKBH4Q9NXW9 302 aa13.46□□□□□ -0.26
VCAN-211ENST00000513984 GNG8Q9UK08 70 aa13.46□□□□□ -0.26
VCAN-211ENST00000513984 FARSAQ9Y285 508 aaKnown RBP13.46□□□□□ -0.26
VCAN-211ENST00000513984 KNTC1P50748 2209 aa13.46□□□□□ -0.26
VCAN-211ENST00000513984 CFAP54Q96N23 3096 aa13.45□□□□□ -0.26
VCAN-211ENST00000513984 A0A1W2PRG6 482 aa13.45□□□□□ -0.26
VCAN-211ENST00000513984 FAM47E-STBD1D6RA91 191 aa13.45□□□□□ -0.26
VCAN-211ENST00000513984 DVL2O14641 736 aa13.45□□□□□ -0.26
VCAN-211ENST00000513984 MAGEB4O15481 346 aaPredicted RBP13.45□□□□□ -0.26
VCAN-211ENST00000513984 UPK1BO75841 260 aa13.45□□□□□ -0.26
VCAN-211ENST00000513984 HPP00738 406 aa13.45□□□□□ -0.26
VCAN-211ENST00000513984 ADH6P28332 368 aa13.45□□□□□ -0.26
VCAN-211ENST00000513984 OTX2P32243 289 aa13.45□□□□□ -0.26
VCAN-211ENST00000513984 TNFSF8P32971 234 aa13.45□□□□□ -0.26
VCAN-211ENST00000513984 MTNR1BP49286 362 aa13.45□□□□□ -0.26
VCAN-211ENST00000513984 NUBP1P53384 320 aa13.45□□□□□ -0.26
VCAN-211ENST00000513984 SIRPAP78324 504 aa13.45□□□□□ -0.26
VCAN-211ENST00000513984 SLC3A1Q07837 685 aa13.45□□□□□ -0.26
VCAN-211ENST00000513984 RPL22L1Q6P5R6 122 aaKnown RBP13.45□□□□□ -0.26
VCAN-211ENST00000513984 PLCZ1Q86YW0 608 aa13.45□□□□□ -0.26
VCAN-211ENST00000513984 CENPSQ8N2Z9 138 aa13.45□□□□□ -0.26
VCAN-211ENST00000513984 ZNF248Q8NDW4 579 aa13.45□□□□□ -0.26
VCAN-211ENST00000513984 AP3S1Q92572 193 aa13.45□□□□□ -0.26
VCAN-211ENST00000513984 SLC30A2Q9BRI3 323 aa13.45□□□□□ -0.26
VCAN-211ENST00000513984 SERINC1Q9NRX5 453 aa13.45□□□□□ -0.26
VCAN-211ENST00000513984 ACOXLQ9NUZ1 547 aa13.45□□□□□ -0.26
VCAN-211ENST00000513984 FOXJ2Q9P0K8 574 aa13.45□□□□□ -0.26
VCAN-211ENST00000513984 CMAHPQ9Y471 501 aa13.45□□□□□ -0.26
VCAN-211ENST00000513984 A0A0C4DFX4 3053 aa13.45□□□□□ -0.26
VCAN-211ENST00000513984 PRR32B1ATL7 298 aa13.44□□□□□ -0.26
VCAN-211ENST00000513984 RGS5O15539 181 aa13.44□□□□□ -0.26
VCAN-211ENST00000513984 CCL3P10147 92 aa13.44□□□□□ -0.26
VCAN-211ENST00000513984 EIF1P41567 113 aaKnown RBP13.44□□□□□ -0.26
VCAN-211ENST00000513984 CENPAP49450 140 aa13.44□□□□□ -0.26
VCAN-211ENST00000513984 ZNF181Q2M3W8 571 aa13.44□□□□□ -0.26
VCAN-211ENST00000513984 KCTD20Q7Z5Y7 419 aa13.44□□□□□ -0.26
VCAN-211ENST00000513984 PXKQ7Z7A4 578 aa13.44□□□□□ -0.26
VCAN-211ENST00000513984 SNX29P2Q8IUI4 249 aa13.44□□□□□ -0.26
VCAN-211ENST00000513984 LAX1Q8IWV1 398 aa13.44□□□□□ -0.26
VCAN-211ENST00000513984 ABHD4Q8TB40 342 aa13.44□□□□□ -0.26
VCAN-211ENST00000513984 GHSRQ92847 366 aa13.44□□□□□ -0.26
VCAN-211ENST00000513984 MROQ9BYG7 248 aa13.44□□□□□ -0.26
VCAN-211ENST00000513984 PROK2Q9HC23 129 aa13.44□□□□□ -0.26
VCAN-211ENST00000513984 B9D1Q9UPM9 204 aa13.44□□□□□ -0.26
VCAN-211ENST00000513984 A0A087WZY1 265 aa13.43□□□□□ -0.26
VCAN-211ENST00000513984 IGLV1-36A0A0B4J1U3 117 aa13.43□□□□□ -0.26
VCAN-211ENST00000513984 A0A1W2PNV4 684 aa13.43□□□□□ -0.26
VCAN-211ENST00000513984 A6NIZ1 184 aa13.43□□□□□ -0.26
VCAN-211ENST00000513984 LOC110117498-PIK3R3F6TDL0 507 aa13.43□□□□□ -0.26
VCAN-211ENST00000513984 H3BML4 177 aa13.43□□□□□ -0.26
VCAN-211ENST00000513984 AKR7A3O95154 331 aa13.43□□□□□ -0.26
VCAN-211ENST00000513984 TFPIP10646 304 aa13.43□□□□□ -0.26
VCAN-211ENST00000513984 HLA-DOBP13765 273 aa13.43□□□□□ -0.26
VCAN-211ENST00000513984 CFL1P23528 166 aaKnown RBP13.43□□□□□ -0.26
VCAN-211ENST00000513984 GDI2P50395 445 aaKnown RBP13.43□□□□□ -0.26
VCAN-211ENST00000513984 RAP1BP61224 184 aa13.43□□□□□ -0.26
VCAN-211ENST00000513984 RAP1AP62834 184 aa13.43□□□□□ -0.26
VCAN-211ENST00000513984 RPS15P62841 145 aaKnown RBP13.43□□□□□ -0.26
VCAN-211ENST00000513984 TLE3Q04726 772 aa13.43□□□□□ -0.26
VCAN-211ENST00000513984 SPEM2Q0P670 501 aa13.43□□□□□ -0.26
VCAN-211ENST00000513984 Q0VFX4 171 aa13.43□□□□□ -0.26
VCAN-211ENST00000513984 SELENBP1Q13228 472 aa13.43□□□□□ -0.26
VCAN-211ENST00000513984 ATP1A4Q13733 1029 aa13.43□□□□□ -0.26
VCAN-211ENST00000513984 GLYR1Q49A26 553 aaPredicted RBP13.43□□□□□ -0.26
VCAN-211ENST00000513984 TMEM164Q5U3C3 297 aa13.43□□□□□ -0.26
VCAN-211ENST00000513984 H3F3CQ6NXT2 135 aa13.43□□□□□ -0.26
VCAN-211ENST00000513984 PLEKHG7Q6ZR37 379 aa13.43□□□□□ -0.26
VCAN-211ENST00000513984 TMEM156Q8N614 296 aa13.43□□□□□ -0.26
VCAN-211ENST00000513984 ESX1Q8N693 406 aa13.43□□□□□ -0.26
VCAN-211ENST00000513984 ADPRHL1Q8NDY3 354 aa13.43□□□□□ -0.26
VCAN-211ENST00000513984 SLC25A43Q8WUT9 341 aaPredicted RBP13.43□□□□□ -0.26
VCAN-211ENST00000513984 ASB10Q8WXI3 467 aa13.43□□□□□ -0.26
VCAN-211ENST00000513984 RELTQ969Z4 430 aa13.43□□□□□ -0.26
VCAN-211ENST00000513984 ZBTB8AQ96BR9 441 aa13.43□□□□□ -0.26
VCAN-211ENST00000513984 KLHL15Q96M94 604 aa13.43□□□□□ -0.26
VCAN-211ENST00000513984 INTS14Q96SY0 518 aa13.43□□□□□ -0.26
VCAN-211ENST00000513984 CCDC86Q9H6F5 360 aaKnown RBP13.43□□□□□ -0.26
VCAN-211ENST00000513984 WDR76Q9H967 626 aa13.43□□□□□ -0.26
VCAN-211ENST00000513984 HPF1Q9NWY4 346 aa13.43□□□□□ -0.26
VCAN-211ENST00000513984 B3GALT5Q9Y2C3 310 aa13.43□□□□□ -0.26
VCAN-211ENST00000513984 KLHDC2Q9Y2U9 406 aa13.43□□□□□ -0.26
VCAN-211ENST00000513984 UGT2A1Q9Y4X1 527 aa13.43□□□□□ -0.26
VCAN-211ENST00000513984 SLC22A23A1A5C7 686 aa13.43□□□□□ -0.26
VCAN-211ENST00000513984 SMIM30A4D0T7 59 aa13.43□□□□□ -0.26
VCAN-211ENST00000513984 ISPDA4D126 451 aa13.43□□□□□ -0.26
VCAN-211ENST00000513984 TVP23AA6NH52 213 aa13.43□□□□□ -0.26
VCAN-211ENST00000513984 MASP2O00187 686 aa13.43□□□□□ -0.26
VCAN-211ENST00000513984 SNPHO15079 494 aa13.43□□□□□ -0.26
VCAN-211ENST00000513984 SNX4O95219 450 aa13.43□□□□□ -0.26
VCAN-211ENST00000513984 SERPINA3P01011 423 aa13.43□□□□□ -0.26
VCAN-211ENST00000513984 FKBP2P26885 142 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms