RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 LRFN4Q6PJG9 635 aa14.08□□□□□ -0.16
PDLIM5-216ENST00000511767 FKBP9P1Q75LS8 142 aa14.08□□□□□ -0.16
PDLIM5-216ENST00000511767 PIAS4Q8N2W9 510 aaPredicted RBP14.08□□□□□ -0.16
PDLIM5-216ENST00000511767 FITM2Q8N6M3 262 aa14.08□□□□□ -0.16
PDLIM5-216ENST00000511767 RNF148Q8N7C7 305 aa14.08□□□□□ -0.16
PDLIM5-216ENST00000511767 FAM169BQ8N8A8 192 aa14.08□□□□□ -0.16
PDLIM5-216ENST00000511767 TMEM54Q969K7 222 aa14.08□□□□□ -0.16
PDLIM5-216ENST00000511767 PRRC1Q96M27 445 aa14.08□□□□□ -0.16
PDLIM5-216ENST00000511767 CDRT15Q96T59 188 aa14.08□□□□□ -0.16
PDLIM5-216ENST00000511767 GRIP2Q9C0E4 1043 aa14.08□□□□□ -0.16
PDLIM5-216ENST00000511767 GORASP2Q9H8Y8 452 aa14.08□□□□□ -0.16
PDLIM5-216ENST00000511767 DLL4Q9NR61 685 aa14.08□□□□□ -0.16
PDLIM5-216ENST00000511767 DCAF13Q9NV06 445 aaKnown RBP14.08□□□□□ -0.16
PDLIM5-216ENST00000511767 RHCGQ9UBD6 479 aa14.08□□□□□ -0.16
PDLIM5-216ENST00000511767 CRNNQ9UBG3 495 aaPredicted RBP14.08□□□□□ -0.16
PDLIM5-216ENST00000511767 ZNF99A8MXY4 864 aaPredicted RBP14.07□□□□□ -0.16
PDLIM5-216ENST00000511767 RNF13O43567 381 aa14.07□□□□□ -0.16
PDLIM5-216ENST00000511767 SERPINI2O75830 405 aa14.07□□□□□ -0.16
PDLIM5-216ENST00000511767 UMPSP11172 480 aa14.07□□□□□ -0.16
PDLIM5-216ENST00000511767 HSD17B1P14061 328 aa14.07□□□□□ -0.16
PDLIM5-216ENST00000511767 CBR1P16152 277 aa14.07□□□□□ -0.16
PDLIM5-216ENST00000511767 IFNA8P32881 189 aa14.07□□□□□ -0.16
PDLIM5-216ENST00000511767 AQP2P41181 271 aa14.07□□□□□ -0.16
PDLIM5-216ENST00000511767 PTH2RP49190 550 aa14.07□□□□□ -0.16
PDLIM5-216ENST00000511767 UBE2NP61088 152 aaKnown RBP14.07□□□□□ -0.16
PDLIM5-216ENST00000511767 TUBA1BP68363 451 aa14.07□□□□□ -0.16
PDLIM5-216ENST00000511767 TUBA4AP68366 448 aa14.07□□□□□ -0.16
PDLIM5-216ENST00000511767 RPL18Q07020 188 aaKnown RBP14.07□□□□□ -0.16
PDLIM5-216ENST00000511767 SPOCK1Q08629 439 aa14.07□□□□□ -0.16
PDLIM5-216ENST00000511767 KRT72Q14CN4 511 aa14.07□□□□□ -0.16
PDLIM5-216ENST00000511767 SLC22A25Q6T423 547 aa14.07□□□□□ -0.16
PDLIM5-216ENST00000511767 TUBA1AQ71U36 451 aa14.07□□□□□ -0.16
PDLIM5-216ENST00000511767 ZNF627Q7L945 461 aa14.07□□□□□ -0.16
PDLIM5-216ENST00000511767 PGAM4Q8N0Y7 254 aa14.07□□□□□ -0.16
PDLIM5-216ENST00000511767 DEPDC4Q8N2C3 294 aa14.07□□□□□ -0.16
PDLIM5-216ENST00000511767 FAM156AQ8NDB6 213 aa14.07□□□□□ -0.16
PDLIM5-216ENST00000511767 OR6N1Q8NGY5 312 aa14.07□□□□□ -0.16
PDLIM5-216ENST00000511767 GEMIN6Q8WXD5 167 aaKnown RBP14.07□□□□□ -0.16
PDLIM5-216ENST00000511767 FAM162AQ96A26 154 aa14.07□□□□□ -0.16
PDLIM5-216ENST00000511767 SLC25A44Q96H78 314 aaPredicted RBP14.07□□□□□ -0.16
PDLIM5-216ENST00000511767 HSH2DQ96JZ2 352 aa14.07□□□□□ -0.16
PDLIM5-216ENST00000511767 ADAD1Q96M93 576 aaKnown RBP14.07□□□□□ -0.16
PDLIM5-216ENST00000511767 DHRS9Q9BPW9 319 aa14.07□□□□□ -0.16
PDLIM5-216ENST00000511767 FNDC11Q9BVV2 318 aa14.07□□□□□ -0.16
PDLIM5-216ENST00000511767 B3GNT2Q9NY97 397 aa14.07□□□□□ -0.16
PDLIM5-216ENST00000511767 RTTNQ86VV8 2226 aa14.07□□□□□ -0.16
PDLIM5-216ENST00000511767 SETD2Q9BYW2 2564 aaPredicted RBP14.06□□□□□ -0.16
PDLIM5-216ENST00000511767 FLNAP21333 2647 aaKnown RBP14.06□□□□□ -0.16
PDLIM5-216ENST00000511767 IGHV1-18A0A0C4DH31 117 aa14.06□□□□□ -0.16
PDLIM5-216ENST00000511767 BCL10O95999 233 aa14.06□□□□□ -0.16
PDLIM5-216ENST00000511767 FOSL1P15407 271 aa14.06□□□□□ -0.16
PDLIM5-216ENST00000511767 TTKP33981 857 aa14.06□□□□□ -0.16
PDLIM5-216ENST00000511767 MSX2P35548 267 aaPredicted RBP14.06□□□□□ -0.16
PDLIM5-216ENST00000511767 PRKCDQ05655 676 aa14.06□□□□□ -0.16
PDLIM5-216ENST00000511767 TRAM2Q15035 370 aa14.06□□□□□ -0.16
PDLIM5-216ENST00000511767 C3orf36Q3SXR2 165 aa14.06□□□□□ -0.16
PDLIM5-216ENST00000511767 IQCCQ4KMZ1 466 aa14.06□□□□□ -0.16
PDLIM5-216ENST00000511767 TBPL2Q6SJ96 375 aa14.06□□□□□ -0.16
PDLIM5-216ENST00000511767 KLHL24Q6TFL4 600 aa14.06□□□□□ -0.16
PDLIM5-216ENST00000511767 B3GLCTQ6Y288 498 aa14.06□□□□□ -0.16
PDLIM5-216ENST00000511767 DTX2Q86UW9 622 aa14.06□□□□□ -0.16
PDLIM5-216ENST00000511767 CCDC36Q8IYA8 594 aa14.06□□□□□ -0.16
PDLIM5-216ENST00000511767 RNF113BQ8IZP6 322 aaKnown RBP14.06□□□□□ -0.16
PDLIM5-216ENST00000511767 OFCC1Q8IZS5 231 aa14.06□□□□□ -0.16
PDLIM5-216ENST00000511767 RBM15BQ8NDT2 890 aaKnown RBP14.06□□□□□ -0.16
PDLIM5-216ENST00000511767 MOSPD2Q8NHP6 518 aa14.06□□□□□ -0.16
PDLIM5-216ENST00000511767 PERPQ96FX8 193 aa14.06□□□□□ -0.16
PDLIM5-216ENST00000511767 NSL1Q96IY1 281 aa14.06□□□□□ -0.16
PDLIM5-216ENST00000511767 C7orf34Q96L11 122 aa14.06□□□□□ -0.16
PDLIM5-216ENST00000511767 TRAF4Q9BUZ4 470 aaPredicted RBP14.06□□□□□ -0.16
PDLIM5-216ENST00000511767 MRPL13Q9BYD1 178 aaKnown RBP14.06□□□□□ -0.16
PDLIM5-216ENST00000511767 CXorf56Q9H5V9 222 aa14.06□□□□□ -0.16
PDLIM5-216ENST00000511767 NMNAT1Q9HAN9 279 aaPredicted RBP14.06□□□□□ -0.16
PDLIM5-216ENST00000511767 GLTPQ9NZD2 209 aa14.06□□□□□ -0.16
PDLIM5-216ENST00000511767 RPS6KA6Q9UK32 745 aa14.06□□□□□ -0.16
PDLIM5-216ENST00000511767 POFUT2Q9Y2G5 429 aa14.06□□□□□ -0.16
PDLIM5-216ENST00000511767 ENPP4Q9Y6X5 453 aa14.06□□□□□ -0.16
PDLIM5-216ENST00000511767 A0A087WUU8 490 aa14.05□□□□□ -0.16
PDLIM5-216ENST00000511767 ZNF503-AS2A6NEH8 195 aa14.05□□□□□ -0.16
PDLIM5-216ENST00000511767 FAM107AO95990 144 aa14.05□□□□□ -0.16
PDLIM5-216ENST00000511767 IGKV3-15P01624 115 aa14.05□□□□□ -0.16
PDLIM5-216ENST00000511767 IGLV1-44P01699 117 aa14.05□□□□□ -0.16
PDLIM5-216ENST00000511767 F13BP05160 661 aa14.05□□□□□ -0.16
PDLIM5-216ENST00000511767 IFI30P13284 250 aa14.05□□□□□ -0.16
PDLIM5-216ENST00000511767 MAKP20794 623 aa14.05□□□□□ -0.16
PDLIM5-216ENST00000511767 CSNK1A1P48729 337 aa14.05□□□□□ -0.16
PDLIM5-216ENST00000511767 RPS4XP62701 263 aaKnown RBP14.05□□□□□ -0.16
PDLIM5-216ENST00000511767 RUNX1T1Q06455 604 aa14.05□□□□□ -0.16
PDLIM5-216ENST00000511767 FHL1Q13642 323 aa14.05□□□□□ -0.16
PDLIM5-216ENST00000511767 HIST3H3Q16695 136 aa14.05□□□□□ -0.16
PDLIM5-216ENST00000511767 NANOGNBQ7Z5D8 188 aa14.05□□□□□ -0.16
PDLIM5-216ENST00000511767 BPIFA2Q96DR5 249 aa14.05□□□□□ -0.16
PDLIM5-216ENST00000511767 SLC38A2Q96QD8 506 aa14.05□□□□□ -0.16
PDLIM5-216ENST00000511767 TNFRSF13CQ96RJ3 184 aa14.05□□□□□ -0.16
PDLIM5-216ENST00000511767 B3GAT2Q9NPZ5 323 aa14.05□□□□□ -0.16
PDLIM5-216ENST00000511767 NDUFAF4Q9P032 175 aa14.05□□□□□ -0.16
PDLIM5-216ENST00000511767 MOKQ9UQ07 419 aa14.05□□□□□ -0.16
PDLIM5-216ENST00000511767 B2RBV5 119 aa14.04□□□□□ -0.16
PDLIM5-216ENST00000511767 PIP5K1CO60331 668 aa14.04□□□□□ -0.16
PDLIM5-216ENST00000511767 T-ENOLP0DO92 83 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms