RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 RPL36A-HNRNPH2H7BZ11 118 aa12.22□□□□□ -0.45
DDX41-212ENST00000511040 H1F0P07305 194 aaKnown RBP12.22□□□□□ -0.45
DDX41-212ENST00000511040 SAGP10523 405 aaPredicted RBP12.22□□□□□ -0.45
DDX41-212ENST00000511040 ATP6V1B2P21281 511 aa12.22□□□□□ -0.45
DDX41-212ENST00000511040 CD40P25942 277 aa12.22□□□□□ -0.45
DDX41-212ENST00000511040 GPR4P46093 362 aa12.22□□□□□ -0.45
DDX41-212ENST00000511040 CSNK1A1P48729 337 aa12.22□□□□□ -0.45
DDX41-212ENST00000511040 SH3BGRP55822 239 aaPredicted RBP12.22□□□□□ -0.45
DDX41-212ENST00000511040 UBE2NP61088 152 aaKnown RBP12.22□□□□□ -0.45
DDX41-212ENST00000511040 RUNX1T1Q06455 604 aa12.22□□□□□ -0.45
DDX41-212ENST00000511040 FGD3Q5JSP0 725 aa12.22□□□□□ -0.45
DDX41-212ENST00000511040 ANKRD16Q6P6B7 361 aa12.22□□□□□ -0.45
DDX41-212ENST00000511040 PODNL1Q6PEZ8 512 aa12.22□□□□□ -0.45
DDX41-212ENST00000511040 C20orf204Q6ZNR8 217 aa12.22□□□□□ -0.45
DDX41-212ENST00000511040 TRPM8Q7Z2W7 1104 aa12.22□□□□□ -0.45
DDX41-212ENST00000511040 IGFN1Q86VF2 1251 aa12.22□□□□□ -0.45
DDX41-212ENST00000511040 PIAS4Q8N2W9 510 aaPredicted RBP12.22□□□□□ -0.45
DDX41-212ENST00000511040 OR13C2Q8NGS9 318 aa12.22□□□□□ -0.45
DDX41-212ENST00000511040 ACOT11Q8WXI4 607 aaPredicted RBP12.22□□□□□ -0.45
DDX41-212ENST00000511040 MBD6Q96DN6 1003 aa12.22□□□□□ -0.45
DDX41-212ENST00000511040 C7orf34Q96L11 122 aa12.22□□□□□ -0.45
DDX41-212ENST00000511040 FOXC2Q99958 501 aa12.22□□□□□ -0.45
DDX41-212ENST00000511040 ULBP2Q9BZM5 246 aa12.22□□□□□ -0.45
DDX41-212ENST00000511040 NELFAQ9H3P2 528 aa12.22□□□□□ -0.45
DDX41-212ENST00000511040 B3GAT2Q9NPZ5 323 aa12.22□□□□□ -0.45
DDX41-212ENST00000511040 INIPQ9NRY2 104 aa12.22□□□□□ -0.45
DDX41-212ENST00000511040 CADP27708 2225 aa12.22□□□□□ -0.45
DDX41-212ENST00000511040 PRRC2AP48634 2157 aaKnown RBP12.22□□□□□ -0.45
DDX41-212ENST00000511040 TRAV27A0A087WT01 109 aa12.21□□□□□ -0.45
DDX41-212ENST00000511040 TRBV4-1A0A0J9YWV2 114 aa12.21□□□□□ -0.45
DDX41-212ENST00000511040 A0A1W2PRG6 482 aa12.21□□□□□ -0.45
DDX41-212ENST00000511040 EFCAB9A8MZ26 197 aa12.21□□□□□ -0.45
DDX41-212ENST00000511040 SHISA9B4DS77 424 aa12.21□□□□□ -0.45
DDX41-212ENST00000511040 MCIDASD6RGH6 385 aa12.21□□□□□ -0.45
DDX41-212ENST00000511040 UBOX5O94941 541 aa12.21□□□□□ -0.45
DDX41-212ENST00000511040 BCL10O95999 233 aa12.21□□□□□ -0.45
DDX41-212ENST00000511040 WNT11O96014 354 aa12.21□□□□□ -0.45
DDX41-212ENST00000511040 IGF2P01344 180 aa12.21□□□□□ -0.45
DDX41-212ENST00000511040 SEMG1P04279 462 aa12.21□□□□□ -0.45
DDX41-212ENST00000511040 RHCEP18577 417 aa12.21□□□□□ -0.45
DDX41-212ENST00000511040 PRKCDQ05655 676 aa12.21□□□□□ -0.45
DDX41-212ENST00000511040 TOP3AQ13472 1001 aaPredicted RBP12.21□□□□□ -0.45
DDX41-212ENST00000511040 SPATS1Q496A3 300 aa12.21□□□□□ -0.45
DDX41-212ENST00000511040 ZNF672Q499Z4 452 aaPredicted RBP12.21□□□□□ -0.45
DDX41-212ENST00000511040 SLC22A25Q6T423 547 aa12.21□□□□□ -0.45
DDX41-212ENST00000511040 TMEM108Q6UXF1 575 aa12.21□□□□□ -0.45
DDX41-212ENST00000511040 MBOAT2Q6ZWT7 520 aa12.21□□□□□ -0.45
DDX41-212ENST00000511040 SSX8Q7RTT4 187 aa12.21□□□□□ -0.45
DDX41-212ENST00000511040 OR52J3Q8NH60 311 aa12.21□□□□□ -0.45
DDX41-212ENST00000511040 OR51A7Q8NH64 312 aa12.21□□□□□ -0.45
DDX41-212ENST00000511040 OR6X1Q8NH79 312 aa12.21□□□□□ -0.45
DDX41-212ENST00000511040 LIPHQ8WWY8 451 aa12.21□□□□□ -0.45
DDX41-212ENST00000511040 TMEM54Q969K7 222 aa12.21□□□□□ -0.45
DDX41-212ENST00000511040 CLPTM1LQ96KA5 538 aa12.21□□□□□ -0.45
DDX41-212ENST00000511040 LRR1Q96L50 414 aa12.21□□□□□ -0.45
DDX41-212ENST00000511040 PIP5K1AQ99755 562 aa12.21□□□□□ -0.45
DDX41-212ENST00000511040 GLTPQ9NZD2 209 aa12.21□□□□□ -0.45
DDX41-212ENST00000511040 POFUT2Q9Y2G5 429 aa12.21□□□□□ -0.45
DDX41-212ENST00000511040 DSCAMO60469 2012 aa12.21□□□□□ -0.46
DDX41-212ENST00000511040 ZNF503-AS2A6NEH8 195 aa12.2□□□□□ -0.46
DDX41-212ENST00000511040 ZNF99A8MXY4 864 aaPredicted RBP12.2□□□□□ -0.46
DDX41-212ENST00000511040 B4GALT1P15291 398 aa12.2□□□□□ -0.46
DDX41-212ENST00000511040 PTAFRP25105 342 aa12.2□□□□□ -0.46
DDX41-212ENST00000511040 CAPZA2P47755 286 aa12.2□□□□□ -0.46
DDX41-212ENST00000511040 CDH11P55287 796 aa12.2□□□□□ -0.46
DDX41-212ENST00000511040 MYBPC1Q00872 1141 aa12.2□□□□□ -0.46
DDX41-212ENST00000511040 SPIBQ01892 262 aa12.2□□□□□ -0.46
DDX41-212ENST00000511040 SEC23BQ15437 767 aa12.2□□□□□ -0.46
DDX41-212ENST00000511040 IQCCQ4KMZ1 466 aa12.2□□□□□ -0.46
DDX41-212ENST00000511040 ZNF813Q6ZN06 617 aa12.2□□□□□ -0.46
DDX41-212ENST00000511040 RRM2BQ7LG56 351 aa12.2□□□□□ -0.46
DDX41-212ENST00000511040 ZNF611Q8N823 705 aa12.2□□□□□ -0.46
DDX41-212ENST00000511040 SYT14Q8NB59 555 aa12.2□□□□□ -0.46
DDX41-212ENST00000511040 SLC7A13Q8TCU3 470 aa12.2□□□□□ -0.46
DDX41-212ENST00000511040 ASB10Q8WXI3 467 aa12.2□□□□□ -0.46
DDX41-212ENST00000511040 ZNF566Q969W8 418 aa12.2□□□□□ -0.46
DDX41-212ENST00000511040 MCUR1Q96AQ8 359 aa12.2□□□□□ -0.46
DDX41-212ENST00000511040 SLC25A44Q96H78 314 aaPredicted RBP12.2□□□□□ -0.46
DDX41-212ENST00000511040 FAM46AQ96IP4 442 aaKnown RBP12.2□□□□□ -0.46
DDX41-212ENST00000511040 ADAD1Q96M93 576 aaKnown RBP12.2□□□□□ -0.46
DDX41-212ENST00000511040 TNFRSF13CQ96RJ3 184 aa12.2□□□□□ -0.46
DDX41-212ENST00000511040 BEX4Q9NWD9 120 aaPredicted RBP12.2□□□□□ -0.46
DDX41-212ENST00000511040 TAS2R1Q9NYW7 299 aa12.2□□□□□ -0.46
DDX41-212ENST00000511040 POU2F3Q9UKI9 436 aa12.2□□□□□ -0.46
DDX41-212ENST00000511040 ARPC4-TTLL3A0A0A6YYG9 625 aa12.19□□□□□ -0.46
DDX41-212ENST00000511040 IGHV1-18A0A0C4DH31 117 aa12.19□□□□□ -0.46
DDX41-212ENST00000511040 A0A1W2PRQ8 180 aa12.19□□□□□ -0.46
DDX41-212ENST00000511040 CDC42EP2O14613 210 aa12.19□□□□□ -0.46
DDX41-212ENST00000511040 SMPD2O60906 423 aa12.19□□□□□ -0.46
DDX41-212ENST00000511040 IGHG1P01857 330 aa12.19□□□□□ -0.46
DDX41-212ENST00000511040 HLA-HP01893 362 aa12.19□□□□□ -0.46
DDX41-212ENST00000511040 SOD3P08294 240 aa12.19□□□□□ -0.46
DDX41-212ENST00000511040 CELA3BP08861 270 aa12.19□□□□□ -0.46
DDX41-212ENST00000511040 TSPAN19P0C672 248 aa12.19□□□□□ -0.46
DDX41-212ENST00000511040 PGA4P0DJD7 388 aa12.19□□□□□ -0.46
DDX41-212ENST00000511040 PGA3P0DJD8 388 aa12.19□□□□□ -0.46
DDX41-212ENST00000511040 ITGA2P17301 1181 aa12.19□□□□□ -0.46
DDX41-212ENST00000511040 DAP3P51398 398 aaKnown RBP12.19□□□□□ -0.46
DDX41-212ENST00000511040 CLRN1P58418 232 aa12.19□□□□□ -0.46
DDX41-212ENST00000511040 MS4A2Q01362 244 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms