RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 CA3P07451 260 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 NQO2P16083 231 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 CYP3A5P20815 502 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 CALML3P27482 149 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 PTGFRP43088 359 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 TUFMP49411 452 aaKnown RBP3.1□□□□□ -1.91
NUP54-209ENST00000510569 MFAP2P55001 183 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 SEC61GP60059 68 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 MYBPC1Q00872 1141 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 ENPEPQ07075 957 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 CDH17Q12864 832 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 STX5Q13190 355 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 TGFBIQ15582 683 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 TRIP10Q15642 601 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 ALX1Q15699 326 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 VAMP3Q15836 100 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 PSG3Q16557 428 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 QRICH1Q2TAL8 776 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 C18orf21Q32NC0 220 aaPredicted RBP3.1□□□□□ -1.91
NUP54-209ENST00000510569 ALKBH6Q3KRA9 238 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 DCAF4L1Q3SXM0 396 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 ZNF658BQ4V348 819 aaPredicted RBP3.1□□□□□ -1.91
NUP54-209ENST00000510569 UNC50Q53HI1 259 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 XKR4Q5GH76 650 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 MFSD14CQ5VZR4 134 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 FAM219BQ5XKK7 198 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 TMEM225Q6GV28 225 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 C1orf94Q6P1W5 598 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 WASH2PQ6VEQ5 465 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 PAGE2Q7Z2X7 111 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 STHQ8IWL8 128 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 SELENOHQ8IZQ5 122 aaKnown RBP3.1□□□□□ -1.91
NUP54-209ENST00000510569 Q8N9L7 120 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 OR5T3Q8NGG3 340 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 TEX47Q8TBZ9 253 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 M1APQ8TC57 530 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 RAD51AP1Q96B01 352 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 CCDC124Q96CT7 223 aaKnown RBP3.1□□□□□ -1.91
NUP54-209ENST00000510569 PCED1BQ96HM7 432 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 ACCSQ96QU6 501 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 OR5M11Q96RB7 305 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 KIR2DL4Q99706 377 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 PELOQ9BRX2 385 aaKnown RBP3.1□□□□□ -1.91
NUP54-209ENST00000510569 TUBGCP2Q9BSJ2 902 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 PRRG3Q9BZD7 231 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 POLR3FQ9H1D9 316 aaPredicted RBP3.1□□□□□ -1.91
NUP54-209ENST00000510569 GOLPH3Q9H4A6 298 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 SAV1Q9H4B6 383 aaPredicted RBP3.1□□□□□ -1.91
NUP54-209ENST00000510569 ZDHHC6Q9H6R6 413 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 C12orf10Q9HB07 376 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 TREX1Q9NSU2 369 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 AHSPQ9NZD4 102 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 KLRF1Q9NZS2 232 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 EIF3KQ9UBQ5 218 aaKnown RBP3.1□□□□□ -1.91
NUP54-209ENST00000510569 COPS7AQ9UBW8 275 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 CIDEBQ9UHD4 219 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 NAGKQ9UJ70 344 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 FOXJ3Q9UPW0 622 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 SAMHD1Q9Y3Z3 626 aaKnown RBP3.1□□□□□ -1.91
NUP54-209ENST00000510569 CHD4Q14839 1912 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 AHDC1Q5TGY3 1603 aaPredicted RBP3.1□□□□□ -1.91
NUP54-209ENST00000510569 CDHR2Q9BYE9 1310 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 PEAK1Q9H792 1746 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 FMN2Q9NZ56 1722 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 PHRF1Q9P1Y6 1649 aaKnown RBP3.09□□□□□ -1.91
NUP54-209ENST00000510569 MYO10Q9HD67 2058 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 FAM208AQ9UK61 1670 aaKnown RBP3.09□□□□□ -1.91
NUP54-209ENST00000510569 A0A0A6YYH2 397 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 RAB19A4D1S5 217 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 METTL21EPA6NDL7 271 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 MGAT4DA6NG13 374 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 A6NJ64 397 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 GOLGA8JA6NMD2 632 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 SNTNA6NMZ2 147 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 SERPINE3A8MV23 424 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 B4DXG7 233 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 GOLGA8KD6RF30 607 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 WWP2O00308 870 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 BCKDKO14874 412 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 SCAMP2O15127 329 aaKnown RBP3.09□□□□□ -1.91
NUP54-209ENST00000510569 COCHO43405 550 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 DENRO43583 198 aaKnown RBP3.09□□□□□ -1.91
NUP54-209ENST00000510569 LRP3O75074 770 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 CIAO1O76071 339 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 OR2F2O95006 317 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 PGK1P00558 417 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 FCER2P06734 321 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 ERCC1P07992 297 aaPredicted RBP3.09□□□□□ -1.91
NUP54-209ENST00000510569 SERPINA6P08185 405 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 GOLGA8HP0CJ92 632 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 IDO1P14902 403 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 GNSP15586 552 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 TPSB2P20231 275 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 IL12BP29460 328 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 PRDX2P32119 198 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 P2RY2P41231 377 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 SLC6A8P48029 635 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 ARRB1P49407 418 aaPredicted RBP3.09□□□□□ -1.91
NUP54-209ENST00000510569 CASP4P49662 377 aa3.09□□□□□ -1.91
NUP54-209ENST00000510569 EFNA3P52797 238 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms