RNA–Protein interactions for RNA: ENST00000509900.5

PTPN20-223, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 693 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-223	ENST00000509900	LASP1	Q14847	261 aa	Known RBP	7.92	□□□□□ -1.14
PTPN20-223	ENST00000509900	TMEM255A	Q5JRV8	349 aa		7.92	□□□□□ -1.14
PTPN20-223	ENST00000509900	LCE4A	Q5TA78	99 aa		7.92	□□□□□ -1.14
PTPN20-223	ENST00000509900	ZBTB37	Q5TC79	503 aa		7.92	□□□□□ -1.14
PTPN20-223	ENST00000509900	ADAMTSL5	Q6ZMM2	481 aa		7.92	□□□□□ -1.14
PTPN20-223	ENST00000509900	ZNF584	Q8IVC4	421 aa		7.92	□□□□□ -1.14
PTPN20-223	ENST00000509900	PAQR4	Q8N4S7	273 aa	Predicted RBP	7.92	□□□□□ -1.14
PTPN20-223	ENST00000509900	KLHDC1	Q8N7A1	406 aa		7.92	□□□□□ -1.14
PTPN20-223	ENST00000509900	FAM71C	Q8NEG0	241 aa		7.92	□□□□□ -1.14
PTPN20-223	ENST00000509900	OR4F17	Q8NGA8	305 aa		7.92	□□□□□ -1.14
PTPN20-223	ENST00000509900	ZNF563	Q8TA94	476 aa		7.92	□□□□□ -1.14
PTPN20-223	ENST00000509900	GEMIN6	Q8WXD5	167 aa	Known RBP	7.92	□□□□□ -1.14
PTPN20-223	ENST00000509900	CHMP6	Q96FZ7	201 aa		7.92	□□□□□ -1.14
PTPN20-223	ENST00000509900	GPR78	Q96P69	363 aa		7.92	□□□□□ -1.14
PTPN20-223	ENST00000509900	OR4F4	Q96R69	305 aa		7.92	□□□□□ -1.14
PTPN20-223	ENST00000509900	OR51B6	Q9H340	312 aa		7.92	□□□□□ -1.14
PTPN20-223	ENST00000509900	CNTD2	Q9H8S5	307 aa		7.92	□□□□□ -1.14
PTPN20-223	ENST00000509900	ACOXL	Q9NUZ1	547 aa		7.92	□□□□□ -1.14
PTPN20-223	ENST00000509900	SIRT5	Q9NXA8	310 aa		7.92	□□□□□ -1.14
PTPN20-223	ENST00000509900	RCE1	Q9Y256	329 aa		7.92	□□□□□ -1.14
PTPN20-223	ENST00000509900	TMED7	Q9Y3B3	224 aa		7.92	□□□□□ -1.14
PTPN20-223	ENST00000509900	USH1C	Q9Y6N9	552 aa		7.92	□□□□□ -1.14
PTPN20-223	ENST00000509900		A0A0U1RQK1	487 aa		7.91	□□□□□ -1.14
PTPN20-223	ENST00000509900	CENPVL3	A0A0U1RRI6	287 aa		7.91	□□□□□ -1.14
PTPN20-223	ENST00000509900	CCDC189	A1A4V9	331 aa		7.91	□□□□□ -1.14
PTPN20-223	ENST00000509900	LIPT2	A6NK58	231 aa		7.91	□□□□□ -1.14
PTPN20-223	ENST00000509900	CEACAM18	A8MTB9	384 aa		7.91	□□□□□ -1.14
PTPN20-223	ENST00000509900	ZNF99	A8MXY4	864 aa	Predicted RBP	7.91	□□□□□ -1.14
PTPN20-223	ENST00000509900	STX16-NPEPL1	H3BU86	382 aa		7.91	□□□□□ -1.14
PTPN20-223	ENST00000509900	STX16	O14662	325 aa		7.91	□□□□□ -1.14
PTPN20-223	ENST00000509900	PDPK1	O15530	556 aa		7.91	□□□□□ -1.14
PTPN20-223	ENST00000509900	ZNF208	O43345	1280 aa		7.91	□□□□□ -1.14
PTPN20-223	ENST00000509900	SPRY3	O43610	288 aa		7.91	□□□□□ -1.14
PTPN20-223	ENST00000509900	OTC	P00480	354 aa		7.91	□□□□□ -1.14
PTPN20-223	ENST00000509900	HMGN2	P05204	90 aa	Known RBP	7.91	□□□□□ -1.14
PTPN20-223	ENST00000509900	CRABP2	P29373	138 aa		7.91	□□□□□ -1.14
PTPN20-223	ENST00000509900	RYK	P34925	604 aa		7.91	□□□□□ -1.14
PTPN20-223	ENST00000509900	ZNF81	P51508	661 aa		7.91	□□□□□ -1.14
PTPN20-223	ENST00000509900	CDH13	P55290	713 aa		7.91	□□□□□ -1.14
PTPN20-223	ENST00000509900	GNB2	P62879	340 aa		7.91	□□□□□ -1.14
PTPN20-223	ENST00000509900	CEACAM7	Q14002	265 aa		7.91	□□□□□ -1.14
PTPN20-223	ENST00000509900	RAB39A	Q14964	217 aa		7.91	□□□□□ -1.14
PTPN20-223	ENST00000509900	ZNF385B	Q569K4	471 aa		7.91	□□□□□ -1.14
PTPN20-223	ENST00000509900	TMEM225	Q6GV28	225 aa		7.91	□□□□□ -1.14
PTPN20-223	ENST00000509900	ANKRD26P1	Q6NSI1	321 aa		7.91	□□□□□ -1.14
PTPN20-223	ENST00000509900	FRRS1	Q6ZNA5	592 aa		7.91	□□□□□ -1.14
PTPN20-223	ENST00000509900	C1orf122	Q6ZSJ8	110 aa		7.91	□□□□□ -1.14
PTPN20-223	ENST00000509900	FITM2	Q8N6M3	262 aa		7.91	□□□□□ -1.14
PTPN20-223	ENST00000509900	ZNF519	Q8TB69	540 aa		7.91	□□□□□ -1.14
PTPN20-223	ENST00000509900	EPS8L3	Q8TE67	593 aa	Known RBP	7.91	□□□□□ -1.14
PTPN20-223	ENST00000509900	LRTOMT	Q8WZ04	291 aa		7.91	□□□□□ -1.14
PTPN20-223	ENST00000509900	DDIT4L	Q96D03	193 aa		7.91	□□□□□ -1.14
PTPN20-223	ENST00000509900	FAM120B	Q96EK7	910 aa	Known RBP	7.91	□□□□□ -1.14
PTPN20-223	ENST00000509900	DPAGT1	Q9H3H5	408 aa		7.91	□□□□□ -1.14
PTPN20-223	ENST00000509900	CENPH	Q9H3R5	247 aa		7.91	□□□□□ -1.14
PTPN20-223	ENST00000509900	TXNDC16	Q9P2K2	825 aa		7.91	□□□□□ -1.14
PTPN20-223	ENST00000509900	VPREB3	Q9UKI3	123 aa		7.91	□□□□□ -1.14
PTPN20-223	ENST00000509900	GUCA1B	Q9UMX6	200 aa		7.91	□□□□□ -1.14
PTPN20-223	ENST00000509900	ZSCAN5B	A6NJL1	495 aa		7.9	□□□□□ -1.14
PTPN20-223	ENST00000509900	RNASEK-C17orf49	H0YIS7	233 aa		7.9	□□□□□ -1.14
PTPN20-223	ENST00000509900	IGHV3-13	P01766	116 aa		7.9	□□□□□ -1.14
PTPN20-223	ENST00000509900	KRT6A	P02538	564 aa		7.9	□□□□□ -1.14
PTPN20-223	ENST00000509900	KRT6B	P04259	564 aa		7.9	□□□□□ -1.14
PTPN20-223	ENST00000509900	GPI	P06744	558 aa		7.9	□□□□□ -1.14
PTPN20-223	ENST00000509900	RPS17	P08708	135 aa	Known RBP	7.9	□□□□□ -1.14
PTPN20-223	ENST00000509900	UQCRC2	P22695	453 aa		7.9	□□□□□ -1.14
PTPN20-223	ENST00000509900	HOXD3	P31249	432 aa	Predicted RBP	7.9	□□□□□ -1.14
PTPN20-223	ENST00000509900	PGM1	P36871	562 aa		7.9	□□□□□ -1.14
PTPN20-223	ENST00000509900	FRK	P42685	505 aa	Predicted RBP	7.9	□□□□□ -1.14
PTPN20-223	ENST00000509900	ETV4	P43268	484 aa		7.9	□□□□□ -1.14
PTPN20-223	ENST00000509900	KRT6C	P48668	564 aa		7.9	□□□□□ -1.14
PTPN20-223	ENST00000509900	MMP15	P51511	669 aa		7.9	□□□□□ -1.14
PTPN20-223	ENST00000509900	BTG1	P62324	171 aa		7.9	□□□□□ -1.14
PTPN20-223	ENST00000509900	PDIA2	Q13087	525 aa	Known RBP	7.9	□□□□□ -1.14
PTPN20-223	ENST00000509900	PPP1R7	Q15435	360 aa		7.9	□□□□□ -1.14
PTPN20-223	ENST00000509900	OR7A5	Q15622	319 aa		7.9	□□□□□ -1.14
PTPN20-223	ENST00000509900	ZNF141	Q15928	474 aa		7.9	□□□□□ -1.14
PTPN20-223	ENST00000509900	FAM83E	Q2M2I3	478 aa		7.9	□□□□□ -1.14
PTPN20-223	ENST00000509900	TTMP	Q5BVD1	217 aa		7.9	□□□□□ -1.14
PTPN20-223	ENST00000509900	PHYHD1	Q5SRE7	291 aa		7.9	□□□□□ -1.14
PTPN20-223	ENST00000509900	EMB	Q6PCB8	327 aa		7.9	□□□□□ -1.14
PTPN20-223	ENST00000509900	GPR137C	Q8N3F9	429 aa		7.9	□□□□□ -1.14
PTPN20-223	ENST00000509900	GATAD2B	Q8WXI9	593 aa		7.9	□□□□□ -1.14
PTPN20-223	ENST00000509900	PMM1	Q92871	262 aa		7.9	□□□□□ -1.14
PTPN20-223	ENST00000509900	EGLN2	Q96KS0	407 aa		7.9	□□□□□ -1.14
PTPN20-223	ENST00000509900	CITED4	Q96RK1	184 aa		7.9	□□□□□ -1.14
PTPN20-223	ENST00000509900	SIGLEC11	Q96RL6	698 aa		7.9	□□□□□ -1.14
PTPN20-223	ENST00000509900	NUDT16L1	Q9BRJ7	211 aa	Known RBP	7.9	□□□□□ -1.14
PTPN20-223	ENST00000509900	PCGF1	Q9BSM1	259 aa		7.9	□□□□□ -1.14
PTPN20-223	ENST00000509900	NANOG	Q9H9S0	305 aa		7.9	□□□□□ -1.14
PTPN20-223	ENST00000509900	PALMD	Q9NP74	551 aa		7.9	□□□□□ -1.14
PTPN20-223	ENST00000509900	TMEM106B	Q9NUM4	274 aa		7.9	□□□□□ -1.14
PTPN20-223	ENST00000509900	OSGIN1	Q9UJX0	560 aa		7.9	□□□□□ -1.14
PTPN20-223	ENST00000509900	UGT2B17	O75795	530 aa		7.89	□□□□□ -1.15
PTPN20-223	ENST00000509900	LCK	P06239	509 aa		7.89	□□□□□ -1.15
PTPN20-223	ENST00000509900	C2	P06681	752 aa		7.89	□□□□□ -1.15
PTPN20-223	ENST00000509900	CHRM4	P08173	479 aa		7.89	□□□□□ -1.15
PTPN20-223	ENST00000509900	ADH4	P08319	380 aa		7.89	□□□□□ -1.15
PTPN20-223	ENST00000509900	CD28	P10747	220 aa		7.89	□□□□□ -1.15
PTPN20-223	ENST00000509900	EFNA1	P20827	205 aa	Predicted RBP	7.89	□□□□□ -1.15

Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms