RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 OR7A10O76100 309 aa6.31□□□□□ -1.4
TOPBP1-207ENST00000509162 CH25HO95992 272 aa6.31□□□□□ -1.4
TOPBP1-207ENST00000509162 NOS3P29474 1203 aa6.31□□□□□ -1.4
TOPBP1-207ENST00000509162 MAP2K6P52564 334 aa6.31□□□□□ -1.4
TOPBP1-207ENST00000509162 CLDN17P56750 224 aa6.31□□□□□ -1.4
TOPBP1-207ENST00000509162 TAS2R41P59536 307 aa6.31□□□□□ -1.4
TOPBP1-207ENST00000509162 TUBA1BP68363 451 aa6.31□□□□□ -1.4
TOPBP1-207ENST00000509162 TUBA4AP68366 448 aa6.31□□□□□ -1.4
TOPBP1-207ENST00000509162 POU3F1Q03052 451 aaPredicted RBP6.31□□□□□ -1.4
TOPBP1-207ENST00000509162 RPL18Q07020 188 aaKnown RBP6.31□□□□□ -1.4
TOPBP1-207ENST00000509162 FOXD4Q12950 439 aaPredicted RBP6.31□□□□□ -1.4
TOPBP1-207ENST00000509162 GABRA6Q16445 453 aa6.31□□□□□ -1.4
TOPBP1-207ENST00000509162 HIKESHIQ53FT3 197 aa6.31□□□□□ -1.4
TOPBP1-207ENST00000509162 IFI44LQ53G44 452 aa6.31□□□□□ -1.4
TOPBP1-207ENST00000509162 GLYATQ6IB77 296 aa6.31□□□□□ -1.4
TOPBP1-207ENST00000509162 PGM2L1Q6PCE3 622 aa6.31□□□□□ -1.4
TOPBP1-207ENST00000509162 PAMR1Q6UXH9 720 aa6.31□□□□□ -1.4
TOPBP1-207ENST00000509162 CYP2R1Q6VVX0 501 aa6.31□□□□□ -1.4
TOPBP1-207ENST00000509162 TUBA1AQ71U36 451 aa6.31□□□□□ -1.4
TOPBP1-207ENST00000509162 BHLHA15Q7RTS1 189 aaPredicted RBP6.31□□□□□ -1.4
TOPBP1-207ENST00000509162 TRPM8Q7Z2W7 1104 aa6.31□□□□□ -1.4
TOPBP1-207ENST00000509162 GPAT4Q86UL3 456 aa6.31□□□□□ -1.4
TOPBP1-207ENST00000509162 TMEM200AQ86VY9 491 aa6.31□□□□□ -1.4
TOPBP1-207ENST00000509162 NRMQ8IXM6 262 aa6.31□□□□□ -1.4
TOPBP1-207ENST00000509162 CLDN22Q8N7P3 220 aa6.31□□□□□ -1.4
TOPBP1-207ENST00000509162 SCAIQ8N9R8 606 aa6.31□□□□□ -1.4
TOPBP1-207ENST00000509162 KBTBD8Q8NFY9 601 aa6.31□□□□□ -1.4
TOPBP1-207ENST00000509162 SLC7A13Q8TCU3 470 aa6.31□□□□□ -1.4
TOPBP1-207ENST00000509162 BCAS4Q8TDM0 211 aa6.31□□□□□ -1.4
TOPBP1-207ENST00000509162 TMEM239Q8WW34 195 aa6.31□□□□□ -1.4
TOPBP1-207ENST00000509162 PROX1Q92786 737 aa6.31□□□□□ -1.4
TOPBP1-207ENST00000509162 FAM162AQ96A26 154 aa6.31□□□□□ -1.4
TOPBP1-207ENST00000509162 APH1AQ96BI3 265 aa6.31□□□□□ -1.4
TOPBP1-207ENST00000509162 SEPHS2Q99611 448 aa6.31□□□□□ -1.4
TOPBP1-207ENST00000509162 TACO1Q9BSH4 297 aaKnown RBP6.31□□□□□ -1.4
TOPBP1-207ENST00000509162 EMC6Q9BV81 110 aa6.31□□□□□ -1.4
TOPBP1-207ENST00000509162 SF3B5Q9BWJ5 86 aaKnown RBP6.31□□□□□ -1.4
TOPBP1-207ENST00000509162 TAPBPLQ9BX59 468 aa6.31□□□□□ -1.4
TOPBP1-207ENST00000509162 SLCO5A1Q9H2Y9 848 aa6.31□□□□□ -1.4
TOPBP1-207ENST00000509162 GORASP2Q9H8Y8 452 aa6.31□□□□□ -1.4
TOPBP1-207ENST00000509162 CACYBPQ9HB71 228 aaKnown RBP6.31□□□□□ -1.4
TOPBP1-207ENST00000509162 TMEM27Q9HBJ8 222 aa6.31□□□□□ -1.4
TOPBP1-207ENST00000509162 TIGARQ9NQ88 270 aa6.31□□□□□ -1.4
TOPBP1-207ENST00000509162 ELOVL5Q9NYP7 299 aa6.31□□□□□ -1.4
TOPBP1-207ENST00000509162 SELENONQ9NZV5 590 aa6.31□□□□□ -1.4
TOPBP1-207ENST00000509162 STOML1Q9UBI4 398 aa6.31□□□□□ -1.4
TOPBP1-207ENST00000509162 RPS6KB2Q9UBS0 482 aa6.31□□□□□ -1.4
TOPBP1-207ENST00000509162 BAG5Q9UL15 447 aa6.31□□□□□ -1.4
TOPBP1-207ENST00000509162 RASD1Q9Y272 281 aa6.31□□□□□ -1.4
TOPBP1-207ENST00000509162 SLC25A15Q9Y619 301 aa6.31□□□□□ -1.4
TOPBP1-207ENST00000509162 ENPP4Q9Y6X5 453 aa6.31□□□□□ -1.4
TOPBP1-207ENST00000509162 PLCE1Q9P212 2302 aa6.31□□□□□ -1.4
TOPBP1-207ENST00000509162 ZANQ9Y493 2812 aa6.31□□□□□ -1.4
TOPBP1-207ENST00000509162 TRAV27A0A087WT01 109 aa6.3□□□□□ -1.4
TOPBP1-207ENST00000509162 LOC102725191A0A1B0GVB3 256 aa6.3□□□□□ -1.4
TOPBP1-207ENST00000509162 SCO2A0A1W2PP80 73 aa6.3□□□□□ -1.4
TOPBP1-207ENST00000509162 DPRXA6NFQ7 191 aa6.3□□□□□ -1.4
TOPBP1-207ENST00000509162 OR5H1A6NKK0 313 aa6.3□□□□□ -1.4
TOPBP1-207ENST00000509162 C11orf98E9PRG8 122 aa6.3□□□□□ -1.4
TOPBP1-207ENST00000509162 PRODHO43272 600 aa6.3□□□□□ -1.4
TOPBP1-207ENST00000509162 IFNW1P05000 195 aa6.3□□□□□ -1.4
TOPBP1-207ENST00000509162 CELA3BP08861 270 aa6.3□□□□□ -1.4
TOPBP1-207ENST00000509162 CALB2P22676 271 aa6.3□□□□□ -1.4
TOPBP1-207ENST00000509162 AQP2P41181 271 aa6.3□□□□□ -1.4
TOPBP1-207ENST00000509162 RBM34P42696 430 aaKnown RBP6.3□□□□□ -1.4
TOPBP1-207ENST00000509162 MAGEA2P43356 314 aa6.3□□□□□ -1.4
TOPBP1-207ENST00000509162 GPR4P46093 362 aa6.3□□□□□ -1.4
TOPBP1-207ENST00000509162 OMPP47874 163 aa6.3□□□□□ -1.4
TOPBP1-207ENST00000509162 FAPQ12884 760 aa6.3□□□□□ -1.4
TOPBP1-207ENST00000509162 ITGADQ13349 1161 aa6.3□□□□□ -1.4
TOPBP1-207ENST00000509162 SAMD4BQ5PRF9 694 aaKnown RBP6.3□□□□□ -1.4
TOPBP1-207ENST00000509162 FBXW9Q5XUX1 488 aa6.3□□□□□ -1.4
TOPBP1-207ENST00000509162 LCN8Q6JVE9 175 aa6.3□□□□□ -1.4
TOPBP1-207ENST00000509162 NIPAL3Q6P499 406 aa6.3□□□□□ -1.4
TOPBP1-207ENST00000509162 BEND4Q6ZU67 534 aa6.3□□□□□ -1.4
TOPBP1-207ENST00000509162 AAED1Q7RTV5 226 aa6.3□□□□□ -1.4
TOPBP1-207ENST00000509162 CDH24Q86UP0 819 aa6.3□□□□□ -1.4
TOPBP1-207ENST00000509162 IGFN1Q86VF2 1251 aa6.3□□□□□ -1.4
TOPBP1-207ENST00000509162 OR4C15Q8NGM1 316 aa6.3□□□□□ -1.4
TOPBP1-207ENST00000509162 OR1K1Q8NGR3 316 aa6.3□□□□□ -1.4
TOPBP1-207ENST00000509162 OR5J2Q8NH18 312 aa6.3□□□□□ -1.4
TOPBP1-207ENST00000509162 FGFBP3Q8TAT2 258 aa6.3□□□□□ -1.4
TOPBP1-207ENST00000509162 SLC26A7Q8TE54 656 aa6.3□□□□□ -1.4
TOPBP1-207ENST00000509162 LIPHQ8WWY8 451 aa6.3□□□□□ -1.4
TOPBP1-207ENST00000509162 ASB10Q8WXI3 467 aa6.3□□□□□ -1.4
TOPBP1-207ENST00000509162 UTP4Q969X6 686 aaKnown RBP6.3□□□□□ -1.4
TOPBP1-207ENST00000509162 CCDC124Q96CT7 223 aaKnown RBP6.3□□□□□ -1.4
TOPBP1-207ENST00000509162 ZHX1-C8orf76Q96EF9 292 aa6.3□□□□□ -1.4
TOPBP1-207ENST00000509162 PIK3IP1Q96FE7 263 aa6.3□□□□□ -1.4
TOPBP1-207ENST00000509162 NSL1Q96IY1 281 aa6.3□□□□□ -1.4
TOPBP1-207ENST00000509162 MPP4Q96JB8 637 aa6.3□□□□□ -1.4
TOPBP1-207ENST00000509162 OXGR1Q96P68 337 aa6.3□□□□□ -1.4
TOPBP1-207ENST00000509162 MED18Q9BUE0 208 aa6.3□□□□□ -1.4
TOPBP1-207ENST00000509162 POLR2J2Q9GZM3 115 aaKnown RBP6.3□□□□□ -1.4
TOPBP1-207ENST00000509162 MRPL18Q9H0U6 180 aaKnown RBP6.3□□□□□ -1.4
TOPBP1-207ENST00000509162 POLR2J3Q9H1A7 115 aaKnown RBP6.3□□□□□ -1.4
TOPBP1-207ENST00000509162 ARMC7Q9H6L4 198 aa6.3□□□□□ -1.4
TOPBP1-207ENST00000509162 EVA1AQ9H8M9 152 aa6.3□□□□□ -1.4
TOPBP1-207ENST00000509162 FKRPQ9H9S5 495 aa6.3□□□□□ -1.4
TOPBP1-207ENST00000509162 PRR13Q9NZ81 148 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms