RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 WARS2Q9UGM6 360 aaKnown RBP1.95□□□□□ -2.1
DEPDC1B-204ENST00000509006 RARRES3Q9UL19 164 aa1.95□□□□□ -2.1
DEPDC1B-204ENST00000509006 PPP1R3CQ9UQK1 317 aa1.95□□□□□ -2.1
DEPDC1B-204ENST00000509006 PDE10AQ9Y233 779 aa1.95□□□□□ -2.1
DEPDC1B-204ENST00000509006 NTNG1Q9Y2I2 539 aa1.95□□□□□ -2.1
DEPDC1B-204ENST00000509006 PLLPQ9Y342 182 aa1.95□□□□□ -2.1
DEPDC1B-204ENST00000509006 RBMX2Q9Y388 322 aaKnown RBP1.95□□□□□ -2.1
DEPDC1B-204ENST00000509006 MRPS18CQ9Y3D5 142 aaKnown RBP1.95□□□□□ -2.1
DEPDC1B-204ENST00000509006 FADS3Q9Y5Q0 445 aa1.95□□□□□ -2.1
DEPDC1B-204ENST00000509006 CSNK1G3Q9Y6M4 447 aa1.95□□□□□ -2.1
DEPDC1B-204ENST00000509006 BRD4O60885 1362 aaPredicted RBP1.95□□□□□ -2.1
DEPDC1B-204ENST00000509006 LRPPRCP42704 1394 aaKnown RBP1.95□□□□□ -2.1
DEPDC1B-204ENST00000509006 SALL1Q9NSC2 1324 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 HSFX4A0A1B0GTS1 333 aaPredicted RBP1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 HSFX3A0A1B0GWH4 333 aaPredicted RBP1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 TMEM213A2RRL7 107 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 GOLGA8IPA6NC78 632 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 LOC110117498-PIK3R3F6TDL0 507 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 RNASEK-C17orf49H0YIS7 233 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 GOLGA6L19H0YKK7 550 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 TEX46H3BTG2 121 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 K7EQD1 137 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 SULT2B1O00204 365 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 FCN1O00602 326 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 TOR1AO14656 332 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 PPP1R2P9O14990 202 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 EIF3HO15372 352 aaKnown RBP eCLIP1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 GATCO43716 136 aaKnown RBP1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 MGRN1O60291 552 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 TRMUO75648 421 aaKnown RBP1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 CST4P01036 141 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 KLK3P07288 261 aaPredicted RBP1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 CD55P08174 381 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 KRT16P08779 473 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 UBTFL1P0CB47 393 aaPredicted RBP1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 TBPP20226 339 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 CMA1P23946 247 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 IL32P24001 234 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 IVDP26440 423 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 LCN1P31025 176 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 LEPP41159 167 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 XCR1P46094 333 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 GPM6AP51674 278 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 CLDN6P56747 220 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 STX17P56962 302 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 GPX6P59796 221 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 STXBP1P61764 594 aaKnown RBP1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 TSPAN5P62079 268 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 RPL8P62917 257 aaKnown RBP1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 MRPS11P82912 194 aaKnown RBP1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 IRF8Q02556 426 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 PUDPQ08623 228 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 SELENBP1Q13228 472 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 CYLC2Q14093 348 aaPredicted RBP1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 TRAM2Q15035 370 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 PSMD5Q16401 504 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 NRF1Q16656 503 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 ISXQ2M1V0 245 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 CCDC14Q49A88 953 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 TCTEX1D4Q5JR98 221 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 ACER2Q5QJU3 275 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 OLFML2AQ68BL7 652 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 PVRIGQ6DKI7 326 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 OR52E8Q6IFG1 317 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 RWDD4Q6NW29 188 aaKnown RBP1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 C1orf94Q6P1W5 598 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 EMBQ6PCB8 327 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 SLC25A48Q6ZT89 311 aaKnown RBP1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 NIPA1Q7RTP0 329 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 SSX7Q7RTT5 188 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 PRSS48Q7RTY5 328 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 NUFIP2Q7Z417 695 aaKnown RBP1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 CYP4Z1Q86W10 505 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 KCNMB4Q86W47 210 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 HPS6Q86YV9 775 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 CRLF3Q8IUI8 442 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 LACC1Q8IV20 430 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 ZNF547Q8IVP9 402 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 CDKL3Q8IVW4 592 aaPredicted RBP1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 PDIK1LQ8N165 341 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 SYS1Q8N2H4 156 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 OR5T1Q8NG75 326 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 OR4D6Q8NGJ1 314 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 OR2G2Q8NGZ5 317 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 OR2T11Q8NH01 316 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 RFESDQ8TAC1 157 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 ITFG1Q8TB96 612 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 FNDC8Q8TC99 324 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 LGALS14Q8TCE9 139 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 ACER1Q8TDN7 264 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 TCP10LQ8TDR4 215 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 IFT81Q8WYA0 676 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 GTF2H4Q92759 462 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 APH1AQ96BI3 265 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 FAM122AQ96E09 287 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 CELF6Q96J87 481 aaKnown RBP1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 MS4A14Q96JA4 679 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 DNAJC1Q96KC8 554 aaKnown RBP1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 SORT1Q99523 831 aa1.94□□□□□ -2.1
DEPDC1B-204ENST00000509006 CTRCQ99895 268 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms