RNA–Protein interactions for RNA: ENST00000508930.1

TRIM41-204, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 3,834 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-204ENST00000508930 RAD1O60671 282 aa13.09□□□□□ -0.31
TRIM41-204ENST00000508930 EFEMP2O95967 443 aa13.09□□□□□ -0.31
TRIM41-204ENST00000508930 GLAP06280 429 aa13.09□□□□□ -0.31
TRIM41-204ENST00000508930 BDKRB2P30411 391 aa13.09□□□□□ -0.31
TRIM41-204ENST00000508930 MEOX2P50222 304 aa13.09□□□□□ -0.31
TRIM41-204ENST00000508930 ACTBP60709 375 aa13.09□□□□□ -0.31
TRIM41-204ENST00000508930 ACTG1P63261 375 aa13.09□□□□□ -0.31
TRIM41-204ENST00000508930 ELAVL3Q14576 367 aaKnown RBP13.09□□□□□ -0.31
TRIM41-204ENST00000508930 PAN3Q58A45 887 aaKnown RBP13.09□□□□□ -0.31
TRIM41-204ENST00000508930 SLC6A19Q695T7 634 aa13.09□□□□□ -0.31
TRIM41-204ENST00000508930 MFSD9Q8NBP5 474 aa13.09□□□□□ -0.31
TRIM41-204ENST00000508930 CAMKVQ8NCB2 501 aa13.09□□□□□ -0.31
TRIM41-204ENST00000508930 OR6N2Q8NGY6 317 aa13.09□□□□□ -0.31
TRIM41-204ENST00000508930 ZNF417Q8TAU3 575 aa13.09□□□□□ -0.31
TRIM41-204ENST00000508930 WFIKKN2Q8TEU8 576 aa13.09□□□□□ -0.31
TRIM41-204ENST00000508930 CASTOR1Q8WTX7 329 aa13.09□□□□□ -0.31
TRIM41-204ENST00000508930 LCN9Q8WX39 176 aa13.09□□□□□ -0.31
TRIM41-204ENST00000508930 NKX3-1Q99801 234 aaPredicted RBP13.09□□□□□ -0.31
TRIM41-204ENST00000508930 MENTQ9BUN1 341 aa13.09□□□□□ -0.31
TRIM41-204ENST00000508930 STEAP1Q9UHE8 339 aa13.09□□□□□ -0.31
TRIM41-204ENST00000508930 KCNE5Q9UJ90 142 aa13.09□□□□□ -0.31
TRIM41-204ENST00000508930 LAMP5Q9UJQ1 280 aa13.09□□□□□ -0.31
TRIM41-204ENST00000508930 ZNF346Q9UL40 294 aaKnown RBP13.09□□□□□ -0.31
TRIM41-204ENST00000508930 TMEM218A2RU14 115 aa13.08□□□□□ -0.32
TRIM41-204ENST00000508930 OR2F2O95006 317 aa13.08□□□□□ -0.32
TRIM41-204ENST00000508930 ADRA2CP18825 462 aa13.08□□□□□ -0.32
TRIM41-204ENST00000508930 OR2F1Q13607 317 aa13.08□□□□□ -0.32
TRIM41-204ENST00000508930 TCEAL5Q5H9L2 206 aa13.08□□□□□ -0.32
TRIM41-204ENST00000508930 ZNRF4Q8WWF5 429 aa13.08□□□□□ -0.32
TRIM41-204ENST00000508930 GAL3ST3Q96A11 431 aa13.08□□□□□ -0.32
TRIM41-204ENST00000508930 KCNK15Q9H427 330 aa13.08□□□□□ -0.32
TRIM41-204ENST00000508930 FLRT3Q9NZU0 649 aa13.08□□□□□ -0.32
TRIM41-204ENST00000508930 OR6C68A6NDL8 312 aa13.08□□□□□ -0.32
TRIM41-204ENST00000508930 BCL2L11O43521 198 aa13.08□□□□□ -0.32
TRIM41-204ENST00000508930 SLC25A12O75746 678 aa13.08□□□□□ -0.32
TRIM41-204ENST00000508930 KCTD9Q7L273 389 aa13.08□□□□□ -0.32
TRIM41-204ENST00000508930 OR1M1Q8NGA1 313 aa13.08□□□□□ -0.32
TRIM41-204ENST00000508930 RGP1Q92546 391 aaPredicted RBP13.08□□□□□ -0.32
TRIM41-204ENST00000508930 NXPE3Q969Y0 559 aa13.08□□□□□ -0.32
TRIM41-204ENST00000508930 CPNE2Q96FN4 548 aaPredicted RBP13.08□□□□□ -0.32
TRIM41-204ENST00000508930 PHPT1Q9NRX4 125 aaPredicted RBP13.08□□□□□ -0.32
TRIM41-204ENST00000508930 ZNF705EA8MWA4 302 aaPredicted RBP13.08□□□□□ -0.32
TRIM41-204ENST00000508930 PPIAP62937 165 aaKnown RBP13.08□□□□□ -0.32
TRIM41-204ENST00000508930 ADAM8P78325 824 aa13.08□□□□□ -0.32
TRIM41-204ENST00000508930 RAB11BQ15907 218 aa13.08□□□□□ -0.32
TRIM41-204ENST00000508930 NKPD1Q17RQ9 610 aa13.08□□□□□ -0.32
TRIM41-204ENST00000508930 HNRNPA1L2Q32P51 320 aaKnown RBP13.08□□□□□ -0.32
TRIM41-204ENST00000508930 ADAMTSL4Q6UY14 1074 aa13.08□□□□□ -0.32
TRIM41-204ENST00000508930 LDLRAD3Q86YD5 345 aa13.08□□□□□ -0.32
TRIM41-204ENST00000508930 GABRG1Q8N1C3 465 aa13.08□□□□□ -0.32
TRIM41-204ENST00000508930 ZBTB8AQ96BR9 441 aa13.08□□□□□ -0.32
TRIM41-204ENST00000508930 CMSS1Q9BQ75 279 aaKnown RBP13.08□□□□□ -0.32
TRIM41-204ENST00000508930 ZNF629Q9UEG4 869 aaPredicted RBP13.08□□□□□ -0.32
TRIM41-204ENST00000508930 CHRNA9Q9UGM1 479 aa13.08□□□□□ -0.32
TRIM41-204ENST00000508930 ZNF337Q9Y3M9 751 aa13.08□□□□□ -0.32
TRIM41-204ENST00000508930 HCFC2Q9Y5Z7 792 aa13.08□□□□□ -0.32
TRIM41-204ENST00000508930 MDC1Q14676 2089 aaKnown RBP13.07□□□□□ -0.32
TRIM41-204ENST00000508930 A0A0B4J2E0 115 aa13.07□□□□□ -0.32
TRIM41-204ENST00000508930 A0A1B0GX12 115 aa13.07□□□□□ -0.32
TRIM41-204ENST00000508930 EEF1E1-BLOC1S5C9J1V9 151 aa13.07□□□□□ -0.32
TRIM41-204ENST00000508930 ZNF254O75437 659 aa13.07□□□□□ -0.32
TRIM41-204ENST00000508930 CYB5AP00167 134 aa13.07□□□□□ -0.32
TRIM41-204ENST00000508930 HLA-AP01891 365 aaKnown RBP13.07□□□□□ -0.32
TRIM41-204ENST00000508930 S100A6P06703 90 aa13.07□□□□□ -0.32
TRIM41-204ENST00000508930 VAMP1P23763 118 aa13.07□□□□□ -0.32
TRIM41-204ENST00000508930 CCR4P51679 360 aa13.07□□□□□ -0.32
TRIM41-204ENST00000508930 EFNB2P52799 333 aa13.07□□□□□ -0.32
TRIM41-204ENST00000508930 MOB3CQ70IA8 216 aa13.07□□□□□ -0.32
TRIM41-204ENST00000508930 CRIPAKQ8N1N5 446 aa13.07□□□□□ -0.32
TRIM41-204ENST00000508930 KCNRGQ8N5I3 272 aa13.07□□□□□ -0.32
TRIM41-204ENST00000508930 OR1J4Q8NGS1 313 aa13.07□□□□□ -0.32
TRIM41-204ENST00000508930 ZPLD1Q8TCW7 415 aa13.07□□□□□ -0.32
TRIM41-204ENST00000508930 GPR148Q8TDV2 347 aa13.07□□□□□ -0.32
TRIM41-204ENST00000508930 ARL11Q969Q4 196 aa13.07□□□□□ -0.32
TRIM41-204ENST00000508930 SLC19A3Q9BZV2 496 aa13.07□□□□□ -0.32
TRIM41-204ENST00000508930 TMEM231Q9H6L2 316 aa13.07□□□□□ -0.32
TRIM41-204ENST00000508930 C19orf53Q9UNZ5 99 aaPredicted RBP13.07□□□□□ -0.32
TRIM41-204ENST00000508930 TRAV8-7A0A075B6U6 113 aa13.07□□□□□ -0.32
TRIM41-204ENST00000508930 C5orf51A6NDU8 294 aa13.07□□□□□ -0.32
TRIM41-204ENST00000508930 PRICKLE3O43900 615 aaPredicted RBP13.07□□□□□ -0.32
TRIM41-204ENST00000508930 OR10H2O60403 315 aa13.07□□□□□ -0.32
TRIM41-204ENST00000508930 SRPX2O60687 465 aaPredicted RBP13.07□□□□□ -0.32
TRIM41-204ENST00000508930 RNGTTO60942 597 aaKnown RBP13.07□□□□□ -0.32
TRIM41-204ENST00000508930 LYPD3O95274 346 aa13.07□□□□□ -0.32
TRIM41-204ENST00000508930 FARS2O95363 451 aaKnown RBP13.07□□□□□ -0.32
TRIM41-204ENST00000508930 CCKBRP32239 447 aa13.07□□□□□ -0.32
TRIM41-204ENST00000508930 MECP2P51608 486 aaKnown RBP13.07□□□□□ -0.32
TRIM41-204ENST00000508930 TAS2R19P59542 299 aa13.07□□□□□ -0.32
TRIM41-204ENST00000508930 HTRA4P83105 476 aaPredicted RBP13.07□□□□□ -0.32
TRIM41-204ENST00000508930 CSRP2Q16527 193 aa13.07□□□□□ -0.32
TRIM41-204ENST00000508930 ZCCHC12Q6PEW1 402 aa13.07□□□□□ -0.32
TRIM41-204ENST00000508930 OR1J2Q8NGS2 313 aa13.07□□□□□ -0.32
TRIM41-204ENST00000508930 NKD1Q969G9 470 aa13.07□□□□□ -0.32
TRIM41-204ENST00000508930 CNTNAP3BQ96NU0 1288 aa13.07□□□□□ -0.32
TRIM41-204ENST00000508930 MYADMQ96S97 322 aa13.07□□□□□ -0.32
TRIM41-204ENST00000508930 MYEF2Q9P2K5 600 aaKnown RBP13.07□□□□□ -0.32
TRIM41-204ENST00000508930 CYB5R1Q9UHQ9 305 aa13.07□□□□□ -0.32
TRIM41-204ENST00000508930 SERTAD3Q9UJW9 196 aa13.07□□□□□ -0.32
TRIM41-204ENST00000508930 MTCL1Q9Y4B5 1905 aaKnown RBP13.07□□□□□ -0.32
TRIM41-204ENST00000508930 SGCEO43556 437 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms