RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 hCG_2039718K7EN88 272 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 GOSR1O95249 250 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 GPIP06744 558 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 ANKRD34CP0C6C1 535 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 PRR35P0CG20 571 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 SLC2A1P11166 492 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 ZNF12P17014 697 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 HIST1H1TP22492 207 aaPredicted RBP2.71□□□□□ -1.98
NEDD4-208ENST00000508342 UQCRC2P22695 453 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 RBMXP38159 391 aaKnown RBP2.71□□□□□ -1.98
NEDD4-208ENST00000508342 NAA10P41227 235 aaPredicted RBP2.71□□□□□ -1.98
NEDD4-208ENST00000508342 ZNF83P51522 516 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 EDDM3BP56851 147 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 RPP30P78346 268 aaKnown RBP2.71□□□□□ -1.98
NEDD4-208ENST00000508342 RTP5Q14D33 572 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 ZNF829Q3KNS6 432 aaPredicted RBP2.71□□□□□ -1.98
NEDD4-208ENST00000508342 CDONQ4KMG0 1287 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 ZNF613Q6PF04 617 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 Q71RC1 249 aaPredicted RBP2.71□□□□□ -1.98
NEDD4-208ENST00000508342 GDPD3Q7L5L3 318 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 TRABD2AQ86V40 505 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 CLVS1Q8IUQ0 354 aaPredicted RBP2.71□□□□□ -1.98
NEDD4-208ENST00000508342 D2HGDHQ8N465 521 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 OR2T4Q8NH00 348 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 OR51A7Q8NH64 312 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 LMO3Q8TAP4 145 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 SLC44A1Q8WWI5 657 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 AP1S3Q96PC3 154 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 TECTBQ96PL2 329 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 SYT3Q9BQG1 590 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 TMEM208Q9BTX3 173 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 BARX1Q9HBU1 254 aaPredicted RBP2.71□□□□□ -1.98
NEDD4-208ENST00000508342 GCM1Q9NP62 436 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 COPZ2Q9P299 210 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 B3GAT1Q9P2W7 334 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 SLC23A2Q9UGH3 650 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 STEAP1Q9UHE8 339 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 NDRG4Q9ULP0 352 aaKnown RBP2.71□□□□□ -1.98
NEDD4-208ENST00000508342 COPS3Q9UNS2 423 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 PTPN13Q12923 2485 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 MPDZO75970 2070 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 C9JVG2 144 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 SOCS2O14508 198 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 GREM1O60565 184 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 ZMPSTE24O75844 475 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 SEC14L2O76054 403 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 SCELO95171 688 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 SLC16A8O95907 504 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 IFNA5P01569 189 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 TACR3P29371 465 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 ATP5J2P56134 94 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 DSCR4P56555 118 aaPredicted RBP2.71□□□□□ -1.98
NEDD4-208ENST00000508342 TAS2R38P59533 333 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 PPP1CAP62136 330 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 CRYZQ08257 329 aaKnown RBP2.71□□□□□ -1.98
NEDD4-208ENST00000508342 KLF10Q13118 480 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 XKRXQ6PP77 449 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 LHFPL2Q6ZUX7 228 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 AKAP14Q86UN6 197 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 SPAG16Q8N0X2 631 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 CA13Q8N1Q1 262 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 TEX26Q8N6G2 289 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 ACOT4Q8N9L9 421 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 ST6GALNAC3Q8NDV1 305 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 GJC3Q8NFK1 279 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 OR4F6Q8NGB9 312 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 OR2T27Q8NH04 317 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 NEIL2Q969S2 332 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 ZNF775Q96BV0 537 aaPredicted RBP2.71□□□□□ -1.98
NEDD4-208ENST00000508342 SGTBQ96EQ0 304 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 HSH2DQ96JZ2 352 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 MBOAT4Q96T53 435 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 TSSK6Q9BXA6 273 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 WWTR1Q9GZV5 400 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 MUC13Q9H3R2 512 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 AKIRIN1Q9H9L7 192 aaPredicted RBP2.71□□□□□ -1.98
NEDD4-208ENST00000508342 ZNF224Q9NZL3 707 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 DHDHQ9UQ10 334 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 A0A087WV48 116 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 PRSS51A0A1B0GVH4 220 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 TCRBV7S3A2A0A539 114 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 NPIPA7E9PJI5 369 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 TRAPPC2LH3BP13 241 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 NPIPA8P0DM63 369 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 ANXA8P13928 327 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 EPHA1P21709 976 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 TGM1P22735 817 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 TEAD1P28347 426 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 CRABP1P29762 137 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 KCNJ3P48549 501 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 GALEQ14376 348 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 PPA1Q15181 289 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 TMEM176BQ3YBM2 270 aaPredicted RBP2.71□□□□□ -1.98
NEDD4-208ENST00000508342 ETFRF1Q6IPR1 90 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 RPL13AP3Q6NVV1 102 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 ZNF782Q6ZMW2 699 aaPredicted RBP2.71□□□□□ -1.98
NEDD4-208ENST00000508342 C17orf107Q6ZR85 190 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 TIPARPQ7Z3E1 657 aaKnown RBP2.71□□□□□ -1.98
NEDD4-208ENST00000508342 MARCH3Q86UD3 253 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 VRK3Q8IV63 474 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms