RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 ZNF319Q9P2F9 582 aa2.04□□□□□ -2.08
TOPBP1-205ENST00000506779 GALPQ9UBC7 116 aa2.04□□□□□ -2.08
TOPBP1-205ENST00000506779 MARCOQ9UEW3 520 aaPredicted RBP2.04□□□□□ -2.08
TOPBP1-205ENST00000506779 PTBP2Q9UKA9 531 aaKnown RBP2.04□□□□□ -2.08
TOPBP1-205ENST00000506779 PCTPQ9UKL6 214 aa2.04□□□□□ -2.08
TOPBP1-205ENST00000506779 SPATA2Q9UM82 520 aa2.04□□□□□ -2.08
TOPBP1-205ENST00000506779 PRPF19Q9UMS4 504 aaKnown RBP2.04□□□□□ -2.08
TOPBP1-205ENST00000506779 EIF3LQ9Y262 564 aaKnown RBP2.04□□□□□ -2.08
TOPBP1-205ENST00000506779 AP3M1Q9Y2T2 418 aa2.04□□□□□ -2.08
TOPBP1-205ENST00000506779 NDUFAF1Q9Y375 327 aa2.04□□□□□ -2.08
TOPBP1-205ENST00000506779 TMED5Q9Y3A6 229 aa2.04□□□□□ -2.08
TOPBP1-205ENST00000506779 MTF2Q9Y483 593 aaPredicted RBP2.04□□□□□ -2.08
TOPBP1-205ENST00000506779 DNAJC15Q9Y5T4 150 aa2.04□□□□□ -2.08
TOPBP1-205ENST00000506779 HEBP2Q9Y5Z4 205 aa2.04□□□□□ -2.08
TOPBP1-205ENST00000506779 VWA8A3KMH1 1905 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 PTPRDP23468 1912 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 CENPFP49454 3210 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 LOC100653049A0A140TA62 436 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 IQCMA0A1B0GVH7 501 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 A0A1W2PP18 115 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 TMEM129A0AVI4 362 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 SLC5A10A0PJK1 596 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 SMIM30A4D0T7 59 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 IGLON5A6NGN9 336 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 OR2AG2A6NM03 316 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 OR5K4A6NMS3 321 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 E9PBE3 544 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 H0YIV9 168 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 M0R296 226 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 FOXE1O00358 373 aaPredicted RBP2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 UBFD1O14562 309 aaKnown RBP2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 ANGPT2O15123 496 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 INPP4BO15327 924 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 ZW10O43264 779 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 SYT7O43581 403 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 KLHL41O60662 606 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 FKBP6O75344 327 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 SEC22BO75396 215 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 LYPLA1O75608 230 aaPredicted RBP2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 RAD51DO75771 328 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 KRT34O76011 436 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 C1orf105O95561 183 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 KLF8O95600 359 aaPredicted RBP2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 SEMA4FO95754 770 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 GUCA1CO95843 209 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 RENP00797 406 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 TNFP01375 233 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 IGHG3P01860 377 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 PCCBP05166 539 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 IL6P05231 212 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 CHRNGP07510 517 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 FHP07954 510 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 RPS17P08708 135 aaKnown RBP2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 LINC00032P0C843 101 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 PRPS2P11908 318 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 COX4I1P13073 169 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 HLA-EP13747 358 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 FOSL2P15408 326 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 NQO1P15559 274 aaKnown RBP2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 PRPS1L1P21108 318 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 HNRNPA2B1P22626 353 aaKnown RBP2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 DRD3P35462 400 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 RABIFP47224 123 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 MRPL19P49406 292 aaKnown RBP2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 CCR4P51679 360 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 RAP1GDS1P52306 607 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 ARFIP1P53367 373 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 KCNK10P57789 538 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 STARD6P59095 220 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 KIAA1024LP59773 190 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 ERVK-8P63133 956 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 SEMG2Q02383 582 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 IRF8Q02556 426 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 TGM3Q08188 693 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 FASTKQ14296 549 aaKnown RBP2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 PON2Q15165 354 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 SPHARQ15513 63 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 SNCBQ16143 134 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 IMPG1Q17R60 797 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 WSCD2Q2TBF2 565 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 TRMT5Q32P41 509 aaKnown RBP2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 GGTA1PQ4G0N0 100 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 AARDQ4LEZ3 155 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 SPIN4Q56A73 249 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 CGB2Q6NT52 195 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 MED27Q6P2C8 311 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 AGTRAPQ6RW13 159 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 SBSNQ6UWP8 590 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 WASH2PQ6VEQ5 465 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 HACD2Q6Y1H2 254 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 ASRGL1Q7L266 308 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 TIPARPQ7Z3E1 657 aaKnown RBP2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 NUFIP2Q7Z417 695 aaKnown RBP2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 GOLGA7Q7Z5G4 137 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 NET1Q7Z628 596 aaPredicted RBP2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 THOC6Q86W42 341 aaKnown RBP2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 TRIM69Q86WT6 500 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 TBC1D21Q8IYX1 336 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 FBXW8Q8N3Y1 598 aa2.03□□□□□ -2.08
TOPBP1-205ENST00000506779 SNX31Q8N9S9 440 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms