RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 ZNF566Q969W8 418 aa14.64□□□□□ -0.07
SNCA-209ENST00000506244 ASB9Q96DX5 294 aa14.64□□□□□ -0.07
SNCA-209ENST00000506244 RADILQ96JH8 1075 aa14.64□□□□□ -0.07
SNCA-209ENST00000506244 DHRS1Q96LJ7 313 aa14.64□□□□□ -0.07
SNCA-209ENST00000506244 TMEM204Q9BSN7 226 aa14.64□□□□□ -0.07
SNCA-209ENST00000506244 UBTD1Q9HAC8 227 aa14.64□□□□□ -0.07
SNCA-209ENST00000506244 TAS2R1Q9NYW7 299 aa14.64□□□□□ -0.07
SNCA-209ENST00000506244 MGAT4BQ9UQ53 548 aa14.64□□□□□ -0.07
SNCA-209ENST00000506244 HIF3AQ9Y2N7 669 aa14.64□□□□□ -0.07
SNCA-209ENST00000506244 CSMD2Q7Z408 3487 aa14.64□□□□□ -0.07
SNCA-209ENST00000506244 TACC2O95359 2948 aa14.63□□□□□ -0.07
SNCA-209ENST00000506244 A0A1W2PPR1 153 aa14.63□□□□□ -0.07
SNCA-209ENST00000506244 ZNF99A8MXY4 864 aaPredicted RBP14.63□□□□□ -0.07
SNCA-209ENST00000506244 CENPBD1B2RD01 187 aa14.63□□□□□ -0.07
SNCA-209ENST00000506244 M0R3G1 203 aa14.63□□□□□ -0.07
SNCA-209ENST00000506244 GYG2O15488 501 aa14.63□□□□□ -0.07
SNCA-209ENST00000506244 CLOCKO15516 846 aa14.63□□□□□ -0.07
SNCA-209ENST00000506244 PDE5AO76074 875 aa14.63□□□□□ -0.07
SNCA-209ENST00000506244 IGHG1P01857 330 aa14.63□□□□□ -0.07
SNCA-209ENST00000506244 TSPAN19P0C672 248 aa14.63□□□□□ -0.07
SNCA-209ENST00000506244 ATP6V1B2P21281 511 aa14.63□□□□□ -0.07
SNCA-209ENST00000506244 PTAFRP25105 342 aa14.63□□□□□ -0.07
SNCA-209ENST00000506244 AQP2P41181 271 aa14.63□□□□□ -0.07
SNCA-209ENST00000506244 RPS4XP62701 263 aaKnown RBP14.63□□□□□ -0.07
SNCA-209ENST00000506244 SPIBQ01892 262 aa14.63□□□□□ -0.07
SNCA-209ENST00000506244 CEACAM16Q2WEN9 425 aa14.63□□□□□ -0.07
SNCA-209ENST00000506244 TBRG1Q3YBR2 411 aa14.63□□□□□ -0.07
SNCA-209ENST00000506244 ALG10Q5BKT4 473 aa14.63□□□□□ -0.07
SNCA-209ENST00000506244 NHLRC1Q6VVB1 395 aa14.63□□□□□ -0.07
SNCA-209ENST00000506244 CYP2R1Q6VVX0 501 aa14.63□□□□□ -0.07
SNCA-209ENST00000506244 LINGO2Q7L985 606 aa14.63□□□□□ -0.07
SNCA-209ENST00000506244 TSEN54Q7Z6J9 526 aaKnown RBP14.63□□□□□ -0.07
SNCA-209ENST00000506244 OAFQ86UD1 273 aa14.63□□□□□ -0.07
SNCA-209ENST00000506244 CCDC36Q8IYA8 594 aa14.63□□□□□ -0.07
SNCA-209ENST00000506244 SLC7A13Q8TCU3 470 aa14.63□□□□□ -0.07
SNCA-209ENST00000506244 CCDC124Q96CT7 223 aaKnown RBP14.63□□□□□ -0.07
SNCA-209ENST00000506244 SLC25A44Q96H78 314 aaPredicted RBP14.63□□□□□ -0.07
SNCA-209ENST00000506244 TXNDC15Q96J42 360 aa14.63□□□□□ -0.07
SNCA-209ENST00000506244 LRGUKQ96M69 825 aa14.63□□□□□ -0.07
SNCA-209ENST00000506244 IL1RAPQ9NPH3 570 aa14.63□□□□□ -0.07
SNCA-209ENST00000506244 PLEKHA6Q9Y2H5 1048 aa14.63□□□□□ -0.07
SNCA-209ENST00000506244 ARPC4-TTLL3A0A0A6YYG9 625 aa14.62□□□□□ -0.07
SNCA-209ENST00000506244 GADD45GO95257 159 aa14.62□□□□□ -0.07
SNCA-209ENST00000506244 CLRN1P58418 232 aa14.62□□□□□ -0.07
SNCA-209ENST00000506244 MELKQ14680 651 aa14.62□□□□□ -0.07
SNCA-209ENST00000506244 HIKESHIQ53FT3 197 aa14.62□□□□□ -0.07
SNCA-209ENST00000506244 FAM205BPQ63HN1 556 aa14.62□□□□□ -0.07
SNCA-209ENST00000506244 ZDHHC21Q8IVQ6 265 aa14.62□□□□□ -0.07
SNCA-209ENST00000506244 MBD6Q96DN6 1003 aa14.62□□□□□ -0.07
SNCA-209ENST00000506244 THTPAQ9BU02 230 aa14.62□□□□□ -0.07
SNCA-209ENST00000506244 MAGIXQ9H6Y5 334 aa14.62□□□□□ -0.07
SNCA-209ENST00000506244 CCM2LQ9NUG4 571 aaPredicted RBP14.62□□□□□ -0.07
SNCA-209ENST00000506244 NPAP1Q9NZP6 1156 aa14.62□□□□□ -0.07
SNCA-209ENST00000506244 POFUT2Q9Y2G5 429 aa14.62□□□□□ -0.07
SNCA-209ENST00000506244 CCDC168Q8NDH2 2452 aa14.61□□□□□ -0.07
SNCA-209ENST00000506244 HRNRQ86YZ3 2850 aaPredicted RBP14.61□□□□□ -0.07
SNCA-209ENST00000506244 A0A1W2PR80 420 aa14.61□□□□□ -0.07
SNCA-209ENST00000506244 M0R1B8 84 aa14.61□□□□□ -0.07
SNCA-209ENST00000506244 HS3ST1O14792 307 aa14.61□□□□□ -0.07
SNCA-209ENST00000506244 ATE1O95260 518 aa14.61□□□□□ -0.07
SNCA-209ENST00000506244 F13BP05160 661 aa14.61□□□□□ -0.07
SNCA-209ENST00000506244 PGA4P0DJD7 388 aa14.61□□□□□ -0.07
SNCA-209ENST00000506244 PGA3P0DJD8 388 aa14.61□□□□□ -0.07
SNCA-209ENST00000506244 HOXB6P17509 224 aaKnown RBP14.61□□□□□ -0.07
SNCA-209ENST00000506244 MAKP20794 623 aa14.61□□□□□ -0.07
SNCA-209ENST00000506244 IFNGR2P38484 337 aa14.61□□□□□ -0.07
SNCA-209ENST00000506244 GPR4P46093 362 aa14.61□□□□□ -0.07
SNCA-209ENST00000506244 RASSF2P50749 326 aa14.61□□□□□ -0.07
SNCA-209ENST00000506244 ZNF83P51522 516 aa14.61□□□□□ -0.07
SNCA-209ENST00000506244 ARF1P84077 181 aaKnown RBP14.61□□□□□ -0.07
SNCA-209ENST00000506244 ACKR1Q16570 336 aa14.61□□□□□ -0.07
SNCA-209ENST00000506244 FAM98BQ52LJ0 330 aaKnown RBP14.61□□□□□ -0.07
SNCA-209ENST00000506244 ADAM5Q6NVV9 412 aa14.61□□□□□ -0.07
SNCA-209ENST00000506244 PODNL1Q6PEZ8 512 aa14.61□□□□□ -0.07
SNCA-209ENST00000506244 TMPRSS11FQ6ZWK6 438 aa14.61□□□□□ -0.07
SNCA-209ENST00000506244 PIWIL3Q7Z3Z3 882 aaKnown RBP14.61□□□□□ -0.07
SNCA-209ENST00000506244 DEPDC4Q8N2C3 294 aa14.61□□□□□ -0.07
SNCA-209ENST00000506244 WDR31Q8NA23 367 aa14.61□□□□□ -0.07
SNCA-209ENST00000506244 NOXO1Q8NFA2 376 aa14.61□□□□□ -0.07
SNCA-209ENST00000506244 OR4K5Q8NGD3 323 aa14.61□□□□□ -0.07
SNCA-209ENST00000506244 NANOS1Q8WY41 292 aaKnown RBP14.61□□□□□ -0.07
SNCA-209ENST00000506244 BCL2L2Q92843 193 aaPredicted RBP14.61□□□□□ -0.07
SNCA-209ENST00000506244 TMEM54Q969K7 222 aa14.61□□□□□ -0.07
SNCA-209ENST00000506244 PIGTQ969N2 578 aa14.61□□□□□ -0.07
SNCA-209ENST00000506244 FBXW5Q969U6 566 aa14.61□□□□□ -0.07
SNCA-209ENST00000506244 CCL19Q99731 98 aa14.61□□□□□ -0.07
SNCA-209ENST00000506244 LIME1Q9H400 295 aa14.61□□□□□ -0.07
SNCA-209ENST00000506244 GLTPQ9NZD2 209 aa14.61□□□□□ -0.07
SNCA-209ENST00000506244 TMCC3Q9ULS5 477 aa14.61□□□□□ -0.07
SNCA-209ENST00000506244 AURKCQ9UQB9 309 aa14.61□□□□□ -0.07
SNCA-209ENST00000506244 AKAP6Q13023 2319 aa14.61□□□□□ -0.07
SNCA-209ENST00000506244 PDZD2O15018 2839 aa14.61□□□□□ -0.07
SNCA-209ENST00000506244 TRAV27A0A087WT01 109 aa14.6□□□□□ -0.07
SNCA-209ENST00000506244 TRBV4-1A0A0J9YWV2 114 aa14.6□□□□□ -0.07
SNCA-209ENST00000506244 DPRXA6NFQ7 191 aa14.6□□□□□ -0.07
SNCA-209ENST00000506244 ABCD4O14678 606 aa14.6□□□□□ -0.07
SNCA-209ENST00000506244 TMCC2O75069 709 aa14.6□□□□□ -0.07
SNCA-209ENST00000506244 KRT36O76013 467 aa14.6□□□□□ -0.07
SNCA-209ENST00000506244 DIRAS1O95057 198 aa14.6□□□□□ -0.07
SNCA-209ENST00000506244 IGHMP01871 453 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms