RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 FAM118BQ9BPY3 351 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 GATA5Q9BWX5 397 aaPredicted RBP2.05□□□□□ -2.08
NEDD4-205ENST00000506154 SEC11CQ9BY50 192 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 ZNF224Q9NZL3 707 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 SLC9A8Q9Y2E8 581 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 CPED1A4D0V7 1026 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 B4DGG1 531 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 M0QZ24 198 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 FCN1O00602 326 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 CDIPTO14735 213 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 TIAF1O95411 115 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 CLEC3BP05452 202 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 GLI4P10075 376 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 BGNP21810 368 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 RPS9P46781 194 aaKnown RBP2.05□□□□□ -2.08
NEDD4-205ENST00000506154 PGFP49763 221 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 FHITP49789 147 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 TFAMQ00059 246 aaKnown RBP2.05□□□□□ -2.08
NEDD4-205ENST00000506154 ELAVL1Q15717 326 aaKnown RBP2.05□□□□□ -2.08
NEDD4-205ENST00000506154 ZRANB3Q5FWF4 1079 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 ABHD17BQ5VST6 288 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 STEAP4Q687X5 459 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 MRNIPQ6NTE8 343 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 VWA1Q6PCB0 445 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 GDPGP1Q6ZNW5 385 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 SLC35E3Q7Z769 313 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 DPPA2Q7Z7J5 298 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 KLHDC8AQ8IYD2 350 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 TTC9BQ8N6N2 239 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 RTL3Q8N8U3 475 aaKnown RBP2.05□□□□□ -2.08
NEDD4-205ENST00000506154 FAM71CQ8NEG0 241 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 BHLHE22Q8NFJ8 381 aaPredicted RBP2.05□□□□□ -2.08
NEDD4-205ENST00000506154 VN1R2Q8NFZ6 395 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 CA5BP1Q8WTZ4 195 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 PNPLA2Q96AD5 504 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 KTI12Q96EK9 354 aaPredicted RBP2.05□□□□□ -2.08
NEDD4-205ENST00000506154 MED8Q96G25 268 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 PRR25Q96S07 402 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 CLCC1Q96S66 551 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 C20orf144Q9BQM9 153 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 TMEM43Q9BTV4 400 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 CDCA4Q9BXL8 241 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 FAM234AQ9H0X4 552 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 B3GAT2Q9NPZ5 323 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.05□□□□□ -2.08
NEDD4-205ENST00000506154 ANXA2P2A6NMY6 339 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 NPIPA2E9PIF3 369 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 HBP1O60381 514 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 SCGB2A1O75556 95 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 MT-ATP6P00846 226 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 VCANP13611 3396 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 NPPBP16860 134 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 HLA-DPA1P20036 260 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 TUBG1P23258 451 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 PRPH2P23942 346 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 CYP2F1P24903 491 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 NPBWR1P48145 328 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 WNT3P56703 355 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 C1QTNF8P60827 252 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 YPEL5P62699 121 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 GAMTQ14353 236 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 SPA17Q15506 151 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 MPPE1Q53F39 396 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 LCE2CQ5TA81 110 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 LIPKQ5VXJ0 399 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 FCRL6Q6DN72 434 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 ZNF470Q6ECI4 717 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 PAQR3Q6TCH7 311 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 VRK2Q86Y07 508 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 CBLN2Q8IUK8 224 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 BAP18Q8IXM2 172 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 CPAMD8Q8IZJ3 1885 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 APCDD1Q8J025 514 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 TEX26Q8N6G2 289 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 B3GALNT2Q8NCR0 500 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 OR5B17Q8NGF7 314 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 OR8J1Q8NGP2 316 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 OR2T11Q8NH01 316 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 PHYHIPLQ96FC7 376 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 C4orf36Q96KX1 117 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 SEPT5Q99719 369 aaPredicted RBP2.05□□□□□ -2.08
NEDD4-205ENST00000506154 CMKLR1Q99788 373 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 CBWD1Q9BRT8 395 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 MSTO1Q9BUK6 570 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 SPATA5L1Q9BVQ7 753 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 PRRG3Q9BZD7 231 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 BPIFA1Q9NP55 256 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 TUBG2Q9NRH3 451 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 COPS7AQ9UBW8 275 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 KCNG2Q9UJ96 466 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 FZD4Q9ULV1 537 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 CCL15-CCL14A0A0B4J2E2 113 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 LOC102723971A0A1B0GUV8 181 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 OR6C76A6NM76 312 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 GPR31O00270 319 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 SDHDO14521 159 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 SOCS6O14544 535 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 KRT33AO76009 404 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 RGS11O94810 467 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 FAM157CP0CG43 387 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms