RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, human

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNB1-208	ENST00000504788	TSPO2	Q5TGU0	170 aa		4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	OR2A2	Q6IF42	318 aa		4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	ACSM5	Q6NUN0	579 aa		4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	SMARCD3	Q6STE5	483 aa		4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	FOXL2NB	Q6ZUU3	175 aa		4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	IGFN1	Q86VF2	1251 aa		4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	HIPK1	Q86Z02	1210 aa		4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	SVOPL	Q8N434	492 aa		4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	CBR4	Q8N4T8	237 aa		4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	OR6K3	Q8NGY3	331 aa		4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	OR6X1	Q8NH79	312 aa		4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	PRR7	Q8TB68	274 aa		4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	GNPDA2	Q8TDQ7	276 aa		4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	HDAC2	Q92769	488 aa	Known RBP	4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	TMEM54	Q969K7	222 aa		4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	GTPBP3	Q969Y2	492 aa	Known RBP	4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	MBOAT4	Q96T53	435 aa		4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	EMC6	Q9BV81	110 aa		4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	KATNB1	Q9BVA0	655 aa		4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	RBM4	Q9BWF3	364 aa	Known RBP	4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	SFXN3	Q9BWM7	321 aa		4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	TAPBPL	Q9BX59	468 aa		4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	NMNAT2	Q9BZQ4	307 aa		4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	GRIP2	Q9C0E4	1043 aa		4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	TXNIP	Q9H3M7	391 aa		4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	RNPEPL1	Q9HAU8	725 aa		4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	TIGAR	Q9NQ88	270 aa		4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	SLC7A10	Q9NS82	523 aa		4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	ZNF224	Q9NZL3	707 aa		4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	KLHL9	Q9P2J3	617 aa		4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	PRSS50	Q9UI38	385 aa		4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	ZNF346	Q9UL40	294 aa	Known RBP	4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	MCTS1	Q9ULC4	181 aa	Known RBP	4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	SLC5A6	Q9Y289	635 aa		4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	NOX1	Q9Y5S8	564 aa		4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	CDH10	Q9Y6N8	788 aa		4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	VPS13C	Q709C8	3753 aa		4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	ASH1L	Q9NR48	2969 aa	Known RBP	4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788	ZNF503-AS2	A6NEH8	195 aa		4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788	UNC119B	A6NIH7	251 aa		4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788	SAC3D1	A6NKF1	404 aa		4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788	HSPB2	A8KAH6	182 aa		4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788	C11orf98	E9PRG8	122 aa		4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788	C19orf84	I3L1E1	186 aa		4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788		J3QKU1	62 aa		4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788	NDUFB2	O95178	105 aa		4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788	SOX14	O95416	240 aa		4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788	CNOT4	O95628	575 aa	Known RBP	4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788	STAMBP	O95630	424 aa		4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788	ATP6V1G2	O95670	118 aa		4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788	PLG	P00747	810 aa	Predicted RBP	4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788	IL2RA	P01589	272 aa		4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788	TMIGD3	P0DMS9	266 aa	Predicted RBP	4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788	SAG	P10523	405 aa	Predicted RBP	4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788	ZNF23	P17027	643 aa		4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788	GABRB1	P18505	474 aa		4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788	SDHA	P31040	664 aa		4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788	IFNA8	P32881	189 aa		4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788	CDKN2A	P42771	156 aa	Known RBP	4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788	GIPR	P48546	466 aa		4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788	ALDH3A2	P51648	485 aa		4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788	PRPS1	P60891	318 aa		4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788	PMS2P3	Q13401	168 aa		4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788	DAG1	Q14118	895 aa		4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788	MELK	Q14680	651 aa		4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788	PTGES3	Q15185	160 aa	Known RBP	4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788	HSPB2	Q16082	182 aa		4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788	C10orf128	Q5T292	105 aa		4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788	LPCAT4	Q643R3	524 aa		4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788	C12orf73	Q69YU5	71 aa		4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788	TMEM225	Q6GV28	225 aa		4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788	DPY19L2P2	Q6ZN68	376 aa		4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788	SLC35D2	Q76EJ3	337 aa		4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788	NANOGNB	Q7Z5D8	188 aa		4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788	STK32C	Q86UX6	486 aa		4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788	ZBTB46	Q86UZ6	589 aa		4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788	ATCAY	Q86WG3	371 aa		4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788	ZDHHC13	Q8IUH4	622 aa		4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788	C20orf196	Q8IYI0	205 aa		4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788	ARIH2OS	Q8N7S6	290 aa		4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788	ZNF610	Q8N9Z0	462 aa		4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788	NPEPL1	Q8NDH3	523 aa		4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788	RNF217	Q8TC41	542 aa		4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788	RND1	Q92730	232 aa		4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788	PTP4A1	Q93096	173 aa		4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788	NABP1	Q96AH0	204 aa		4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788	RASD2	Q96D21	266 aa		4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788	SLC25A44	Q96H78	314 aa	Predicted RBP	4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788	LRR1	Q96L50	414 aa		4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788	SAMD8	Q96LT4	415 aa		4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788		Q96M85	177 aa		4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788	ZNF75A	Q96N20	296 aa		4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788	PITX2	Q99697	317 aa		4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788	HCAR1	Q9BXC0	346 aa		4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788	ASPN	Q9BXN1	380 aa		4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788	LINC00470	Q9BZP3	86 aa		4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788	UCK2	Q9BZX2	261 aa		4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788	SLC25A19	Q9HC21	320 aa		4.35	□□□□□ -1.71
LMNB1-208	ENST00000504788	TMCC3	Q9ULS5	477 aa		4.35	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms