RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 TRILQ7L0X0 811 aa4.67□□□□□ -1.66
HTT-202ENST00000502820 TPRA1Q86W33 373 aa4.67□□□□□ -1.66
HTT-202ENST00000502820 C17orf64Q86WR6 236 aa4.67□□□□□ -1.66
HTT-202ENST00000502820 STX12Q86Y82 276 aa4.67□□□□□ -1.66
HTT-202ENST00000502820 SKA3Q8IX90 412 aa4.67□□□□□ -1.66
HTT-202ENST00000502820 MSRB3Q8IXL7 192 aa4.67□□□□□ -1.66
HTT-202ENST00000502820 PDZD9Q8IXQ8 264 aa4.67□□□□□ -1.66
HTT-202ENST00000502820 KLHDC8AQ8IYD2 350 aa4.67□□□□□ -1.66
HTT-202ENST00000502820 HS3ST5Q8IZT8 346 aa4.67□□□□□ -1.66
HTT-202ENST00000502820 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.67□□□□□ -1.66
HTT-202ENST00000502820 C11orf65Q8NCR3 313 aa4.67□□□□□ -1.66
HTT-202ENST00000502820 NAXEQ8NCW5 288 aa4.67□□□□□ -1.66
HTT-202ENST00000502820 FAM71CQ8NEG0 241 aa4.67□□□□□ -1.66
HTT-202ENST00000502820 OR8J2Q8NGG1 315 aa4.67□□□□□ -1.66
HTT-202ENST00000502820 OR52H1Q8NGJ2 320 aa4.67□□□□□ -1.66
HTT-202ENST00000502820 OR4C15Q8NGM1 316 aa4.67□□□□□ -1.66
HTT-202ENST00000502820 OR51Q1Q8NH59 317 aa4.67□□□□□ -1.66
HTT-202ENST00000502820 C16orf52Q8NHV5 167 aa4.67□□□□□ -1.66
HTT-202ENST00000502820 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.67□□□□□ -1.66
HTT-202ENST00000502820 ZCCHC10Q8TBK6 192 aa4.67□□□□□ -1.66
HTT-202ENST00000502820 ELP5Q8TE02 316 aa4.67□□□□□ -1.66
HTT-202ENST00000502820 TMEM171Q8WVE6 324 aa4.67□□□□□ -1.66
HTT-202ENST00000502820 FBXW5Q969U6 566 aa4.67□□□□□ -1.66
HTT-202ENST00000502820 RFT1Q96AA3 541 aa4.67□□□□□ -1.66
HTT-202ENST00000502820 SGK3Q96BR1 496 aa4.67□□□□□ -1.66
HTT-202ENST00000502820 INTS12Q96CB8 462 aaKnown RBP4.67□□□□□ -1.66
HTT-202ENST00000502820 PHYHIPLQ96FC7 376 aa4.67□□□□□ -1.66
HTT-202ENST00000502820 CMTM7Q96FZ5 175 aa4.67□□□□□ -1.66
HTT-202ENST00000502820 HSH2DQ96JZ2 352 aa4.67□□□□□ -1.66
HTT-202ENST00000502820 C7orf34Q96L11 122 aa4.67□□□□□ -1.66
HTT-202ENST00000502820 TRIB1Q96RU8 372 aa4.67□□□□□ -1.66
HTT-202ENST00000502820 USB1Q9BQ65 265 aaKnown RBP4.67□□□□□ -1.66
HTT-202ENST00000502820 MACROD1Q9BQ69 325 aa4.67□□□□□ -1.66
HTT-202ENST00000502820 PIGQQ9BRB3 760 aa4.67□□□□□ -1.66
HTT-202ENST00000502820 ZNF251Q9BRH9 671 aa4.67□□□□□ -1.66
HTT-202ENST00000502820 SPATA5L1Q9BVQ7 753 aa4.67□□□□□ -1.66
HTT-202ENST00000502820 IFT27Q9BW83 186 aa4.67□□□□□ -1.66
HTT-202ENST00000502820 RBM24Q9BX46 236 aaKnown RBP4.67□□□□□ -1.66
HTT-202ENST00000502820 JAM3Q9BX67 310 aa4.67□□□□□ -1.66
HTT-202ENST00000502820 DEFB126Q9BYW3 111 aa4.67□□□□□ -1.66
HTT-202ENST00000502820 REG4Q9BYZ8 158 aa4.67□□□□□ -1.66
HTT-202ENST00000502820 BARHL1Q9BZE3 327 aa4.67□□□□□ -1.66
HTT-202ENST00000502820 POLR2J2Q9GZM3 115 aaKnown RBP4.67□□□□□ -1.66
HTT-202ENST00000502820 SLC25A32Q9H2D1 315 aa4.67□□□□□ -1.66
HTT-202ENST00000502820 MIXL1Q9H2W2 232 aa4.67□□□□□ -1.66
HTT-202ENST00000502820 OR51J1Q9H342 316 aa4.67□□□□□ -1.66
HTT-202ENST00000502820 ELOVL6Q9H5J4 265 aa4.67□□□□□ -1.66
HTT-202ENST00000502820 SLC25A19Q9HC21 320 aa4.67□□□□□ -1.66
HTT-202ENST00000502820 ABCB9Q9NP78 766 aa4.67□□□□□ -1.66
HTT-202ENST00000502820 MMP25Q9NPA2 562 aa4.67□□□□□ -1.66
HTT-202ENST00000502820 FANCFQ9NPI8 374 aa4.67□□□□□ -1.66
HTT-202ENST00000502820 SEMA4BQ9NPR2 832 aaPredicted RBP4.67□□□□□ -1.66
HTT-202ENST00000502820 SNTG1Q9NSN8 517 aa4.67□□□□□ -1.66
HTT-202ENST00000502820 TXNL4BQ9NX01 149 aaKnown RBP4.67□□□□□ -1.66
HTT-202ENST00000502820 MS4A12Q9NXJ0 267 aa4.67□□□□□ -1.66
HTT-202ENST00000502820 SLC25A37Q9NYZ2 338 aa4.67□□□□□ -1.66
HTT-202ENST00000502820 BTNL2Q9UIR0 455 aa4.67□□□□□ -1.66
HTT-202ENST00000502820 COPS3Q9UNS2 423 aa4.67□□□□□ -1.66
HTT-202ENST00000502820 TMEM5Q9Y2B1 443 aa4.67□□□□□ -1.66
HTT-202ENST00000502820 CCL27Q9Y4X3 112 aa4.67□□□□□ -1.66
HTT-202ENST00000502820 SLC22A7Q9Y694 548 aa4.67□□□□□ -1.66
HTT-202ENST00000502820 DSPPQ9NZW4 1301 aa4.67□□□□□ -1.66
HTT-202ENST00000502820 SPTBP11277 2137 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 TRGV5A0A0B4J1U4 118 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 TRBV11-1A0A0K0K1C0 115 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 LINC00854A0A1B0GVQ3 168 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 TRBC2A0A5B9 178 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 FEZF1A0PJY2 475 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 ZNF860A6NHJ4 632 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 SNRPGP15A8MWD9 76 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 MAGEB17A8MXT2 336 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 KDM4EB2RXH2 506 aaPredicted RBP4.66□□□□□ -1.66
HTT-202ENST00000502820 CDC7O00311 574 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 SULT1C2O00338 296 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 PPP6CO00743 305 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 GSTZ1O43708 216 aaPredicted RBP4.66□□□□□ -1.66
HTT-202ENST00000502820 TLX2O43763 284 aaPredicted RBP4.66□□□□□ -1.66
HTT-202ENST00000502820 CD5LO43866 347 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 B4GALT2O60909 372 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 ENTPD6O75354 484 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 STX11O75558 287 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 CDRT1O95170 752 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 OSMP13725 252 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 GABRA1P14867 456 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 PPP3CBP16298 524 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 RHCEP18577 417 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 TSPAN8P19075 237 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 GSTM3P21266 225 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 CBLP22681 906 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 CFPP27918 469 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 GRK5P34947 590 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 MNDAP41218 407 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 LIMS1P48059 325 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 KCNJ5P48544 419 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 IDH2P48735 452 aaKnown RBP4.66□□□□□ -1.66
HTT-202ENST00000502820 MTNR1BP49286 362 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 MEOX2P50222 304 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 MAP2K6P52564 334 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 CRISP1P54107 249 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 SLC26A5P58743 744 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms