RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 ZNF726A6NNF4 738 aa22.09■■□□□ 1.13
LSM6-202ENST00000502781 BCL10O95999 233 aa22.09■■□□□ 1.13
LSM6-202ENST00000502781 CST1P01037 141 aa22.09■■□□□ 1.13
LSM6-202ENST00000502781 PRF1P14222 555 aa22.09■■□□□ 1.13
LSM6-202ENST00000502781 FPR3P25089 353 aa22.09■■□□□ 1.13
LSM6-202ENST00000502781 CCNIQ14094 377 aa22.09■■□□□ 1.13
LSM6-202ENST00000502781 GABRA6Q16445 453 aa22.09■■□□□ 1.13
LSM6-202ENST00000502781 PGBD2Q6P3X8 592 aa22.09■■□□□ 1.13
LSM6-202ENST00000502781 DUS3LQ96G46 650 aaKnown RBP22.09■■□□□ 1.13
LSM6-202ENST00000502781 SLC25A44Q96H78 314 aaPredicted RBP22.09■■□□□ 1.13
LSM6-202ENST00000502781 SAMHD1Q9Y3Z3 626 aaKnown RBP22.09■■□□□ 1.13
LSM6-202ENST00000502781 PRR14LQ5THK1 2151 aa22.09■■□□□ 1.13
LSM6-202ENST00000502781 CRYBG3Q68DQ2 2970 aa22.08■■□□□ 1.13
LSM6-202ENST00000502781 ZNF587BE7ETH6 402 aa22.08■■□□□ 1.12
LSM6-202ENST00000502781 IGHMP01871 453 aa22.08■■□□□ 1.12
LSM6-202ENST00000502781 IFNGR2P38484 337 aa22.08■■□□□ 1.12
LSM6-202ENST00000502781 GSSP48637 474 aa22.08■■□□□ 1.12
LSM6-202ENST00000502781 DAP3P51398 398 aaKnown RBP22.08■■□□□ 1.12
LSM6-202ENST00000502781 FXYD6P3P58550 94 aa22.08■■□□□ 1.12
LSM6-202ENST00000502781 CAMK2DQ13557 499 aa22.08■■□□□ 1.12
LSM6-202ENST00000502781 MELKQ14680 651 aa22.08■■□□□ 1.12
LSM6-202ENST00000502781 TAF11Q15544 211 aa22.08■■□□□ 1.12
LSM6-202ENST00000502781 PHYHD1Q5SRE7 291 aa22.08■■□□□ 1.12
LSM6-202ENST00000502781 ARMC4Q5T2S8 1044 aa22.08■■□□□ 1.12
LSM6-202ENST00000502781 P2RY8Q86VZ1 359 aa22.08■■□□□ 1.12
LSM6-202ENST00000502781 PIAS4Q8N2W9 510 aaPredicted RBP22.08■■□□□ 1.12
LSM6-202ENST00000502781 C1orf162Q8NEQ5 155 aaPredicted RBP22.08■■□□□ 1.12
LSM6-202ENST00000502781 ASB10Q8WXI3 467 aa22.08■■□□□ 1.12
LSM6-202ENST00000502781 RSRC1Q96IZ7 334 aaKnown RBP22.08■■□□□ 1.12
LSM6-202ENST00000502781 TXNIPQ9H3M7 391 aa22.08■■□□□ 1.12
LSM6-202ENST00000502781 YY1AP1Q9H869 796 aa22.08■■□□□ 1.12
LSM6-202ENST00000502781 CELSR2Q9HCU4 2923 aa22.07■■□□□ 1.12
LSM6-202ENST00000502781 ABCA4P78363 2273 aa22.07■■□□□ 1.12
LSM6-202ENST00000502781 UNC119BA6NIH7 251 aa22.07■■□□□ 1.12
LSM6-202ENST00000502781 OR5H1A6NKK0 313 aa22.07■■□□□ 1.12
LSM6-202ENST00000502781 RAD51DO75771 328 aa22.07■■□□□ 1.12
LSM6-202ENST00000502781 CIB2O75838 187 aa22.07■■□□□ 1.12
LSM6-202ENST00000502781 KRT33AO76009 404 aa22.07■■□□□ 1.12
LSM6-202ENST00000502781 GOSR1O95249 250 aa22.07■■□□□ 1.12
LSM6-202ENST00000502781 CRYGSP22914 178 aa22.07■■□□□ 1.12
LSM6-202ENST00000502781 SSTR2P30874 369 aa22.07■■□□□ 1.12
LSM6-202ENST00000502781 ROR2Q01974 943 aaKnown RBP22.07■■□□□ 1.12
LSM6-202ENST00000502781 TGFBR3Q03167 851 aa22.07■■□□□ 1.12
LSM6-202ENST00000502781 PPP1R8Q12972 351 aaKnown RBP22.07■■□□□ 1.12
LSM6-202ENST00000502781 TAB1Q15750 504 aa22.07■■□□□ 1.12
LSM6-202ENST00000502781 CARD17Q5XLA6 110 aa22.07■■□□□ 1.12
LSM6-202ENST00000502781 OR7E24Q6IFN5 339 aa22.07■■□□□ 1.12
LSM6-202ENST00000502781 GPR137CQ8N3F9 429 aa22.07■■□□□ 1.12
LSM6-202ENST00000502781 HSD17B8Q92506 261 aa22.07■■□□□ 1.12
LSM6-202ENST00000502781 TMEM54Q969K7 222 aa22.07■■□□□ 1.12
LSM6-202ENST00000502781 MRPL13Q9BYD1 178 aaKnown RBP22.07■■□□□ 1.12
LSM6-202ENST00000502781 GPR35Q9HC97 309 aa22.07■■□□□ 1.12
LSM6-202ENST00000502781 ZNF226Q9NYT6 803 aa22.07■■□□□ 1.12
LSM6-202ENST00000502781 U3KQV3 271 aa22.07■■□□□ 1.12
LSM6-202ENST00000502781 A6NNC1 897 aa22.06■■□□□ 1.12
LSM6-202ENST00000502781 CENPBD1B2RD01 187 aa22.06■■□□□ 1.12
LSM6-202ENST00000502781 CCNB2O95067 398 aa22.06■■□□□ 1.12
LSM6-202ENST00000502781 PGA4P0DJD7 388 aa22.06■■□□□ 1.12
LSM6-202ENST00000502781 PGA3P0DJD8 388 aa22.06■■□□□ 1.12
LSM6-202ENST00000502781 CTXN1P60606 82 aa22.06■■□□□ 1.12
LSM6-202ENST00000502781 RUNX1T1Q06455 604 aa22.06■■□□□ 1.12
LSM6-202ENST00000502781 HIST3H3Q16695 136 aa22.06■■□□□ 1.12
LSM6-202ENST00000502781 MICAQ29983 383 aa22.06■■□□□ 1.12
LSM6-202ENST00000502781 TIMM23BQ5SRD1 257 aa22.06■■□□□ 1.12
LSM6-202ENST00000502781 C9orf135Q5VTT2 229 aa22.06■■□□□ 1.12
LSM6-202ENST00000502781 SEZ6L2Q6UXD5 910 aa22.06■■□□□ 1.12
LSM6-202ENST00000502781 HDDC2Q7Z4H3 204 aa22.06■■□□□ 1.12
LSM6-202ENST00000502781 C17orf78Q8N4C9 275 aa22.06■■□□□ 1.12
LSM6-202ENST00000502781 OR9Q2Q8NGE9 314 aa22.06■■□□□ 1.12
LSM6-202ENST00000502781 ZNF566Q969W8 418 aa22.06■■□□□ 1.12
LSM6-202ENST00000502781 ZNF837Q96EG3 531 aaPredicted RBP22.06■■□□□ 1.12
LSM6-202ENST00000502781 GPX7Q96SL4 187 aaPredicted RBP22.06■■□□□ 1.12
LSM6-202ENST00000502781 CIB4A0PJX0 185 aa22.05■■□□□ 1.12
LSM6-202ENST00000502781 MCIDASD6RGH6 385 aa22.05■■□□□ 1.12
LSM6-202ENST00000502781 M0R3G1 203 aa22.05■■□□□ 1.12
LSM6-202ENST00000502781 CSNK1A1P48729 337 aa22.05■■□□□ 1.12
LSM6-202ENST00000502781 TSPAN31Q12999 210 aa22.05■■□□□ 1.12
LSM6-202ENST00000502781 HMBOX1Q6NT76 420 aa22.05■■□□□ 1.12
LSM6-202ENST00000502781 IGFN1Q86VF2 1251 aa22.05■■□□□ 1.12
LSM6-202ENST00000502781 GNPDA2Q8TDQ7 276 aa22.05■■□□□ 1.12
LSM6-202ENST00000502781 CRLF2Q9HC73 371 aa22.05■■□□□ 1.12
LSM6-202ENST00000502781 ARMC1Q9NVT9 282 aa22.05■■□□□ 1.12
LSM6-202ENST00000502781 GLTPQ9NZD2 209 aa22.05■■□□□ 1.12
LSM6-202ENST00000502781 STX18Q9P2W9 335 aaKnown RBP22.05■■□□□ 1.12
LSM6-202ENST00000502781 DNAJB9Q9UBS3 223 aa22.05■■□□□ 1.12
LSM6-202ENST00000502781 ZNF346Q9UL40 294 aaKnown RBP22.05■■□□□ 1.12
LSM6-202ENST00000502781 CASKO14936 926 aa22.04■■□□□ 1.12
LSM6-202ENST00000502781 SIAH2O43255 324 aa22.04■■□□□ 1.12
LSM6-202ENST00000502781 CTAG2O75638 210 aa22.04■■□□□ 1.12
LSM6-202ENST00000502781 NDUFB2O95178 105 aa22.04■■□□□ 1.12
LSM6-202ENST00000502781 IGHG1P01857 330 aa22.04■■□□□ 1.12
LSM6-202ENST00000502781 CD14P08571 375 aa22.04■■□□□ 1.12
LSM6-202ENST00000502781 SH3BGRP55822 239 aaPredicted RBP22.04■■□□□ 1.12
LSM6-202ENST00000502781 RPL27P61353 136 aaKnown RBP22.04■■□□□ 1.12
LSM6-202ENST00000502781 TLE4Q04727 773 aa22.04■■□□□ 1.12
LSM6-202ENST00000502781 GABPB1Q06547 395 aaPredicted RBP22.04■■□□□ 1.12
LSM6-202ENST00000502781 STK11Q15831 433 aa22.04■■□□□ 1.12
LSM6-202ENST00000502781 C1QTNF12Q5T7M4 302 aa22.04■■□□□ 1.12
LSM6-202ENST00000502781 THSD4Q6ZMP0 1018 aa22.04■■□□□ 1.12
LSM6-202ENST00000502781 SSX8Q7RTT4 187 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms