RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 ZNF705GA8MUZ8 300 aaPredicted RBP1.27□□□□□ -2.21
SMAD1-203ENST00000502342 INS-IGF2F8WCM5 200 aa1.27□□□□□ -2.21
SMAD1-203ENST00000502342 PRRG1O14668 218 aa1.27□□□□□ -2.21
SMAD1-203ENST00000502342 HSD17B6O14756 317 aa1.27□□□□□ -2.21
SMAD1-203ENST00000502342 KMOO15229 486 aa1.27□□□□□ -2.21
SMAD1-203ENST00000502342 IFNB1P01574 187 aa1.27□□□□□ -2.21
SMAD1-203ENST00000502342 GAPDHP04406 335 aaKnown RBP1.27□□□□□ -2.21
SMAD1-203ENST00000502342 IGHV3-43DP0DP04 118 aa1.27□□□□□ -2.21
SMAD1-203ENST00000502342 CELP19835 753 aa1.27□□□□□ -2.21
SMAD1-203ENST00000502342 MDH1P40925 334 aaKnown RBP1.27□□□□□ -2.21
SMAD1-203ENST00000502342 CACNG7P62955 275 aa1.27□□□□□ -2.21
SMAD1-203ENST00000502342 CBX1P83916 185 aa1.27□□□□□ -2.21
SMAD1-203ENST00000502342 HTD2P86397 168 aa1.27□□□□□ -2.21
SMAD1-203ENST00000502342 ERCC8Q13216 396 aa1.27□□□□□ -2.21
SMAD1-203ENST00000502342 SLC36A3Q495N2 470 aa1.27□□□□□ -2.21
SMAD1-203ENST00000502342 VAX1Q5SQQ9 334 aa1.27□□□□□ -2.21
SMAD1-203ENST00000502342 TMEM225Q6GV28 225 aa1.27□□□□□ -2.21
SMAD1-203ENST00000502342 LINC00173Q6ZV60 143 aa1.27□□□□□ -2.21
SMAD1-203ENST00000502342 STRADAQ7RTN6 431 aa1.27□□□□□ -2.21
SMAD1-203ENST00000502342 RIMKLAQ8IXN7 391 aa1.27□□□□□ -2.21
SMAD1-203ENST00000502342 OR52P1PQ8NH57 321 aa1.27□□□□□ -2.21
SMAD1-203ENST00000502342 TRMT10AQ8TBZ6 339 aaKnown RBP1.27□□□□□ -2.21
SMAD1-203ENST00000502342 PYROXD1Q8WU10 500 aa1.27□□□□□ -2.21
SMAD1-203ENST00000502342 RBMXL1Q96E39 390 aaKnown RBP1.27□□□□□ -2.21
SMAD1-203ENST00000502342 TSSK3Q96PN8 268 aa1.27□□□□□ -2.21
SMAD1-203ENST00000502342 OSBPL11Q9BXB4 747 aa1.27□□□□□ -2.21
SMAD1-203ENST00000502342 SPNS1Q9H2V7 528 aa1.27□□□□□ -2.21
SMAD1-203ENST00000502342 LRRN3Q9H3W5 708 aa1.27□□□□□ -2.21
SMAD1-203ENST00000502342 ZNF355PQ9NSJ1 428 aa1.27□□□□□ -2.21
SMAD1-203ENST00000502342 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.26□□□□□ -2.21
SMAD1-203ENST00000502342 PNPLA6Q8IY17 1366 aa1.26□□□□□ -2.21
SMAD1-203ENST00000502342 CEMIPQ8WUJ3 1361 aa1.26□□□□□ -2.21
SMAD1-203ENST00000502342 A0A1B0GVX0 72 aa1.26□□□□□ -2.21
SMAD1-203ENST00000502342 METTL21EPA6NDL7 271 aa1.26□□□□□ -2.21
SMAD1-203ENST00000502342 OR5B21A6NL26 309 aa1.26□□□□□ -2.21
SMAD1-203ENST00000502342 RPL36A-HNRNPH2H7BZ11 118 aa1.26□□□□□ -2.21
SMAD1-203ENST00000502342 RRP8O43159 456 aaKnown RBP1.26□□□□□ -2.21
SMAD1-203ENST00000502342 RBFOX2O43251 390 aaKnown RBP eCLIP1.26□□□□□ -2.21
SMAD1-203ENST00000502342 MGRN1O60291 552 aa1.26□□□□□ -2.21
SMAD1-203ENST00000502342 SRP72O76094 671 aaKnown RBP1.26□□□□□ -2.21
SMAD1-203ENST00000502342 GABARAPO95166 117 aa1.26□□□□□ -2.21
SMAD1-203ENST00000502342 SLC25A14O95258 325 aaPredicted RBP1.26□□□□□ -2.21
SMAD1-203ENST00000502342 UGT2B4P06133 528 aa1.26□□□□□ -2.21
SMAD1-203ENST00000502342 RNASE2P10153 161 aaKnown RBP1.26□□□□□ -2.21
SMAD1-203ENST00000502342 TCN1P20061 433 aaPredicted RBP1.26□□□□□ -2.21
SMAD1-203ENST00000502342 PAX7P23759 505 aa1.26□□□□□ -2.21
SMAD1-203ENST00000502342 LAP3P28838 519 aa1.26□□□□□ -2.21
SMAD1-203ENST00000502342 CCR1P32246 355 aa1.26□□□□□ -2.21
SMAD1-203ENST00000502342 SOX6P35712 828 aa1.26□□□□□ -2.21
SMAD1-203ENST00000502342 QARSP47897 775 aaKnown RBP1.26□□□□□ -2.21
SMAD1-203ENST00000502342 PPT1P50897 306 aa1.26□□□□□ -2.21
SMAD1-203ENST00000502342 NCBP2P52298 156 aaKnown RBP eCLIP1.26□□□□□ -2.21
SMAD1-203ENST00000502342 RPS21P63220 83 aaKnown RBP1.26□□□□□ -2.21
SMAD1-203ENST00000502342 SLC7A9P82251 487 aa1.26□□□□□ -2.21
SMAD1-203ENST00000502342 SCRN3Q0VDG4 424 aa1.26□□□□□ -2.21
SMAD1-203ENST00000502342 GINS1Q14691 196 aa1.26□□□□□ -2.21
SMAD1-203ENST00000502342 KRTAP13-2Q52LG2 175 aa1.26□□□□□ -2.21
SMAD1-203ENST00000502342 XKR4Q5GH76 650 aa1.26□□□□□ -2.21
SMAD1-203ENST00000502342 C1orf220Q5T0J3 134 aa1.26□□□□□ -2.21
SMAD1-203ENST00000502342 ZNF684Q5T5D7 378 aa1.26□□□□□ -2.21
SMAD1-203ENST00000502342 KRTAP5-7Q6L8G8 165 aa1.26□□□□□ -2.21
SMAD1-203ENST00000502342 NCCRP1Q6ZVX7 275 aaPredicted RBP1.26□□□□□ -2.21
SMAD1-203ENST00000502342 NUDCD3Q8IVD9 361 aa1.26□□□□□ -2.21
SMAD1-203ENST00000502342 ZDHHC21Q8IVQ6 265 aa1.26□□□□□ -2.21
SMAD1-203ENST00000502342 ZNF679Q8IYX0 411 aa1.26□□□□□ -2.21
SMAD1-203ENST00000502342 OR10G4Q8NGN3 311 aa1.26□□□□□ -2.21
SMAD1-203ENST00000502342 RGP1Q92546 391 aaPredicted RBP1.26□□□□□ -2.21
SMAD1-203ENST00000502342 SGK3Q96BR1 496 aa1.26□□□□□ -2.21
SMAD1-203ENST00000502342 RBM14Q96PK6 669 aaKnown RBP1.26□□□□□ -2.21
SMAD1-203ENST00000502342 RNF157Q96PX1 679 aa1.26□□□□□ -2.21
SMAD1-203ENST00000502342 CCT7Q99832 543 aa1.26□□□□□ -2.21
SMAD1-203ENST00000502342 FOXC2Q99958 501 aa1.26□□□□□ -2.21
SMAD1-203ENST00000502342 LINC00597Q9H2U6 94 aa1.26□□□□□ -2.21
SMAD1-203ENST00000502342 LY9Q9HBG7 655 aa1.26□□□□□ -2.21
SMAD1-203ENST00000502342 RAB18Q9NP72 206 aa1.26□□□□□ -2.21
SMAD1-203ENST00000502342 GPATCH2LQ9NWQ4 482 aa1.26□□□□□ -2.21
SMAD1-203ENST00000502342 ZNRD1Q9P1U0 126 aa1.26□□□□□ -2.21
SMAD1-203ENST00000502342 KCNIP3Q9Y2W7 256 aa1.26□□□□□ -2.21
SMAD1-203ENST00000502342 N6AMT1Q9Y5N5 214 aa1.26□□□□□ -2.21
SMAD1-203ENST00000502342 WIF1Q9Y5W5 379 aa1.26□□□□□ -2.21
SMAD1-203ENST00000502342 RFNGQ9Y644 331 aa1.26□□□□□ -2.21
SMAD1-203ENST00000502342 TMEM14AQ9Y6G1 99 aa1.26□□□□□ -2.21
SMAD1-203ENST00000502342 GPATCH8Q9UKJ3 1502 aaKnown RBP1.25□□□□□ -2.21
SMAD1-203ENST00000502342 CENPJQ9HC77 1338 aaPredicted RBP1.25□□□□□ -2.21
SMAD1-203ENST00000502342 IGLV3-22A0A075B6J6 115 aa1.25□□□□□ -2.21
SMAD1-203ENST00000502342 A0A1B0GVI7 797 aa1.25□□□□□ -2.21
SMAD1-203ENST00000502342 H0YHG0 523 aa1.25□□□□□ -2.21
SMAD1-203ENST00000502342 SGK1O00141 431 aa1.25□□□□□ -2.21
SMAD1-203ENST00000502342 XPO1O14980 1071 aaKnown RBP1.25□□□□□ -2.21
SMAD1-203ENST00000502342 SCGNO76038 276 aa1.25□□□□□ -2.21
SMAD1-203ENST00000502342 MPZL1O95297 269 aa1.25□□□□□ -2.21
SMAD1-203ENST00000502342 CAPN1P07384 714 aa1.25□□□□□ -2.21
SMAD1-203ENST00000502342 POLR2MP0CAP2 368 aa1.25□□□□□ -2.21
SMAD1-203ENST00000502342 RPA2P15927 270 aa1.25□□□□□ -2.21
SMAD1-203ENST00000502342 AK4P27144 223 aaPredicted RBP1.25□□□□□ -2.21
SMAD1-203ENST00000502342 NAMPTP43490 491 aa1.25□□□□□ -2.21
SMAD1-203ENST00000502342 CX3CR1P49238 355 aa1.25□□□□□ -2.21
SMAD1-203ENST00000502342 CCR8P51685 355 aa1.25□□□□□ -2.21
SMAD1-203ENST00000502342 SUB1P53999 127 aaKnown RBP eCLIP1.25□□□□□ -2.21
SMAD1-203ENST00000502342 KLRB1Q12918 225 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms