RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 DPY19L4Q7Z388 723 aa8.94□□□□□ -0.98
CLIP1-204ENST00000501271 KANSL1Q7Z3B3 1105 aa8.94□□□□□ -0.98
CLIP1-204ENST00000501271 KCTD20Q7Z5Y7 419 aa8.94□□□□□ -0.98
CLIP1-204ENST00000501271 C17orf82Q86X59 251 aaPredicted RBP8.94□□□□□ -0.98
CLIP1-204ENST00000501271 C9orf40Q8IXQ3 194 aa8.94□□□□□ -0.98
CLIP1-204ENST00000501271 OR11G2Q8NGC1 345 aa8.94□□□□□ -0.98
CLIP1-204ENST00000501271 OR10AC1Q8NH08 325 aa8.94□□□□□ -0.98
CLIP1-204ENST00000501271 SYNPRQ8TBG9 265 aa8.94□□□□□ -0.98
CLIP1-204ENST00000501271 OIT3Q8WWZ8 545 aa8.94□□□□□ -0.98
CLIP1-204ENST00000501271 NUDT9Q9BW91 350 aa8.94□□□□□ -0.98
CLIP1-204ENST00000501271 LAT2Q9GZY6 243 aa8.94□□□□□ -0.98
CLIP1-204ENST00000501271 HRASLSQ9HDD0 168 aa8.94□□□□□ -0.98
CLIP1-204ENST00000501271 NKIRAS2Q9NYR9 191 aa8.94□□□□□ -0.98
CLIP1-204ENST00000501271 STMN3Q9NZ72 180 aa8.94□□□□□ -0.98
CLIP1-204ENST00000501271 KLK11Q9UBX7 282 aa8.94□□□□□ -0.98
CLIP1-204ENST00000501271 LAMP5Q9UJQ1 280 aa8.94□□□□□ -0.98
CLIP1-204ENST00000501271 ING1Q9UK53 422 aaPredicted RBP8.94□□□□□ -0.98
CLIP1-204ENST00000501271 IKZF2Q9UKS7 526 aa8.94□□□□□ -0.98
CLIP1-204ENST00000501271 MGAT4AQ9UM21 535 aa8.94□□□□□ -0.98
CLIP1-204ENST00000501271 FLVCR2Q9UPI3 526 aa8.94□□□□□ -0.98
CLIP1-204ENST00000501271 FOXJ3Q9UPW0 622 aa8.94□□□□□ -0.98
CLIP1-204ENST00000501271 MMACHCQ9Y4U1 282 aa8.94□□□□□ -0.98
CLIP1-204ENST00000501271 ABCA7Q8IZY2 2146 aa8.94□□□□□ -0.98
CLIP1-204ENST00000501271 UNC13CQ8NB66 2214 aa8.93□□□□□ -0.98
CLIP1-204ENST00000501271 TRAV8-7A0A075B6U6 113 aa8.93□□□□□ -0.98
CLIP1-204ENST00000501271 GABARAPH6UMI1 98 aa8.93□□□□□ -0.98
CLIP1-204ENST00000501271 GPR171O14626 319 aa8.93□□□□□ -0.98
CLIP1-204ENST00000501271 TSC22D2O75157 780 aa8.93□□□□□ -0.98
CLIP1-204ENST00000501271 HPXP02790 462 aa8.93□□□□□ -0.98
CLIP1-204ENST00000501271 CD27P26842 260 aa8.93□□□□□ -0.98
CLIP1-204ENST00000501271 RAG2P55895 527 aa8.93□□□□□ -0.98
CLIP1-204ENST00000501271 ZP2Q05996 745 aa8.93□□□□□ -0.98
CLIP1-204ENST00000501271 DMWDQ09019 674 aa8.93□□□□□ -0.98
CLIP1-204ENST00000501271 EMC4Q5J8M3 183 aa8.93□□□□□ -0.98
CLIP1-204ENST00000501271 EEF1A1P5Q5VTE0 462 aa8.93□□□□□ -0.98
CLIP1-204ENST00000501271 LRRC69Q6ZNQ3 347 aa8.93□□□□□ -0.98
CLIP1-204ENST00000501271 MARCH3Q86UD3 253 aa8.93□□□□□ -0.98
CLIP1-204ENST00000501271 LRRTM1Q86UE6 522 aa8.93□□□□□ -0.98
CLIP1-204ENST00000501271 PM20D2Q8IYS1 436 aa8.93□□□□□ -0.98
CLIP1-204ENST00000501271 OR51A4Q8NGJ6 313 aa8.93□□□□□ -0.98
CLIP1-204ENST00000501271 OR2T4Q8NH00 348 aa8.93□□□□□ -0.98
CLIP1-204ENST00000501271 OR56B4Q8NH76 319 aa8.93□□□□□ -0.98
CLIP1-204ENST00000501271 FAM174AQ8TBP5 190 aa8.93□□□□□ -0.98
CLIP1-204ENST00000501271 ZNF431Q8TF32 576 aaPredicted RBP8.93□□□□□ -0.98
CLIP1-204ENST00000501271 DACT3Q96B18 629 aaPredicted RBP8.93□□□□□ -0.98
CLIP1-204ENST00000501271 AMELYQ99218 206 aa8.93□□□□□ -0.98
CLIP1-204ENST00000501271 TCF7L1Q9HCS4 588 aa8.93□□□□□ -0.98
CLIP1-204ENST00000501271 UCKL1Q9NWZ5 548 aa8.93□□□□□ -0.98
CLIP1-204ENST00000501271 ING4Q9UNL4 249 aa8.93□□□□□ -0.98
CLIP1-204ENST00000501271 CEP192Q8TEP8 1941 aa8.93□□□□□ -0.98
CLIP1-204ENST00000501271 A0A1B0GTQ1 180 aa8.93□□□□□ -0.98
CLIP1-204ENST00000501271 OR4C45A6NMZ5 311 aa8.93□□□□□ -0.98
CLIP1-204ENST00000501271 C11orf98E9PRG8 122 aa8.93□□□□□ -0.98
CLIP1-204ENST00000501271 BGLAPP02818 100 aa8.93□□□□□ -0.98
CLIP1-204ENST00000501271 SULT1A3P0DMM9 295 aa8.93□□□□□ -0.98
CLIP1-204ENST00000501271 SULT1A4P0DMN0 295 aa8.93□□□□□ -0.98
CLIP1-204ENST00000501271 TMIGD3P0DMS9 266 aaPredicted RBP8.93□□□□□ -0.98
CLIP1-204ENST00000501271 ALOX5APP20292 161 aa8.93□□□□□ -0.98
CLIP1-204ENST00000501271 CDK2P24941 298 aa8.93□□□□□ -0.98
CLIP1-204ENST00000501271 ZP1P60852 638 aa8.93□□□□□ -0.98
CLIP1-204ENST00000501271 PLA2G7Q13093 441 aa8.93□□□□□ -0.98
CLIP1-204ENST00000501271 BIKQ13323 160 aa8.93□□□□□ -0.98
CLIP1-204ENST00000501271 EBPQ15125 230 aaKnown RBP8.93□□□□□ -0.98
CLIP1-204ENST00000501271 ODF4Q2M2E3 257 aa8.93□□□□□ -0.98
CLIP1-204ENST00000501271 TMEM69Q5SWH9 247 aa8.93□□□□□ -0.98
CLIP1-204ENST00000501271 ZNF767PQ75MW2 155 aa8.93□□□□□ -0.98
CLIP1-204ENST00000501271 PRSS35Q8N3Z0 413 aa8.93□□□□□ -0.98
CLIP1-204ENST00000501271 OR2G2Q8NGZ5 317 aa8.93□□□□□ -0.98
CLIP1-204ENST00000501271 CCDC74AQ96AQ1 378 aa8.93□□□□□ -0.98
CLIP1-204ENST00000501271 GPR137Q96N19 417 aa8.93□□□□□ -0.98
CLIP1-204ENST00000501271 OR1F2PQ96R84 312 aa8.93□□□□□ -0.98
CLIP1-204ENST00000501271 ULBP3Q9BZM4 244 aa8.93□□□□□ -0.98
CLIP1-204ENST00000501271 CHRNA10Q9GZZ6 450 aa8.93□□□□□ -0.98
CLIP1-204ENST00000501271 RANBP3Q9H6Z4 567 aaPredicted RBP8.93□□□□□ -0.98
CLIP1-204ENST00000501271 TAS2R5Q9NYW4 299 aa8.93□□□□□ -0.98
CLIP1-204ENST00000501271 KLHL9Q9P2J3 617 aa8.93□□□□□ -0.98
CLIP1-204ENST00000501271 EPHA6Q9UF33 1036 aa8.93□□□□□ -0.98
CLIP1-204ENST00000501271 MEIKINA0A087WXM9 373 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 KHNYNO15037 678 aaKnown RBP8.92□□□□□ -0.98
CLIP1-204ENST00000501271 PEX14O75381 377 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 KRT33AO76009 404 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 PLGP00747 810 aaPredicted RBP8.92□□□□□ -0.98
CLIP1-204ENST00000501271 RENP00797 406 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 HIST1H2ABP04908 130 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 CALCBP10092 127 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 MAPK3P27361 379 aaPredicted RBP8.92□□□□□ -0.98
CLIP1-204ENST00000501271 ITPKBP27987 946 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 IL12BP29460 328 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 P2RX1P51575 399 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 NR0B1P51843 470 aaKnown RBP8.92□□□□□ -0.98
CLIP1-204ENST00000501271 ANGPT1Q15389 498 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 VWA2Q5GFL6 755 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 FAAP20Q6NZ36 180 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 HIST3H2AQ7L7L0 130 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 FGD2Q7Z6J4 655 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 PRSS58Q8IYP2 241 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 DND1Q8IYX4 353 aaKnown RBP8.92□□□□□ -0.98
CLIP1-204ENST00000501271 THEM6Q8WUY1 208 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 PIGKQ92643 395 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 ATOH1Q92858 354 aaPredicted RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms