RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 ISCUQ9H1K1 167 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 WDR13Q9H1Z4 485 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 JMJD4Q9H9V9 463 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 TMEM165Q9HC07 324 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 TAS2R7Q9NYW3 318 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 UVRAGQ9P2Y5 699 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 FBXW11Q9UKB1 542 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 OR52A1Q9UKL2 312 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 TMCO1Q9UM00 188 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 GPR34Q9UPC5 381 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 KLF12Q9Y4X4 402 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 AP4B1Q9Y6B7 739 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 A3GALT2U3KPV4 340 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 NUP214P35658 2090 aaPredicted RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 A0A1B0GV72 72 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 EXOC1LA0A1B0GW35 172 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 CFAP73A6NFT4 308 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 ZNF850A8MQ14 1090 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 SAP18O00422 153 aaKnown RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 KLRC4O43908 158 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 SC5DO75845 299 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 GLCEO94923 617 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 CLPTM1O96005 669 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 URODP06132 367 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 SMIM18P0DKX4 95 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 AKR1A1P14550 325 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 CMPK1P30085 196 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 IL2RGP31785 369 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 SNCAP37840 140 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 SOX9P48436 509 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 RIDAP52758 137 aaKnown RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 MFAP2P55001 183 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 LINC01547P58512 204 aaPredicted RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 FAM193AP78312 1265 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 MRPS9P82933 396 aaKnown RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 CD83Q01151 205 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 ROR2Q01974 943 aaKnown RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 PPARDQ03181 441 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 CCDC15Q0P6D6 951 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 SGCGQ13326 291 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 MPP3Q13368 585 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 EMC2Q15006 297 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 PON3Q15166 354 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 SGCBQ16585 318 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 RNF151Q2KHN1 245 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 TRIM60Q495X7 471 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 NHLRC3Q5JS37 347 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 GLRA4Q5JXX5 417 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 UBE2UQ5VVX9 321 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 LPCAT3Q6P1A2 487 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 PLET1Q6UQ28 207 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 UNQ5815/PRO19632Q6UWF5 114 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 PCGF5Q86SE9 256 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 SYCP3Q8IZU3 236 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 KRTCAP2Q8N6L1 136 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 ZNF738Q8NE65 137 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 OR10W1Q8NGF6 305 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 OR5L2Q8NGL0 311 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 OR52I2Q8NH67 350 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 MBD3L1Q8WWY6 194 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 WDR34Q96EX3 536 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 AIF1LQ9BQI0 150 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 GBA3Q9H227 469 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 ZNF385DQ9H6B1 395 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 EGLN3Q9H6Z9 239 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 ZNF160Q9HCG1 818 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 RANGRFQ9HD47 186 aaPredicted RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 LHX9Q9NQ69 397 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 MRPL22Q9NWU5 206 aaKnown RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 KLHL14Q9P2G3 628 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 TAGLN3Q9UI15 199 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 KLK12Q9UKR0 248 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 CHKBQ9Y259 395 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 ASF1AQ9Y294 204 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 PEX16Q9Y5Y5 336 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 MRPS18BQ9Y676 258 aaKnown RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 CCNB3Q8WWL7 1395 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 A0A087WUV0 522 aaPredicted RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 A0A087WX48 190 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 TMEM129A0AVI4 362 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 ZNF503-AS2A6NEH8 195 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 H0YGG7 62 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 PLD2O14939 933 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 TM9SF1O15321 606 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 PAPSS1O43252 624 aaPredicted RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 TBX1O43435 398 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 SMPD2O60906 423 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 RTN2O75298 545 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 IGHMP01871 453 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 RPLP2P05387 115 aaKnown RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 TPOP07202 933 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 MGPP08493 103 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 FGF4P08620 206 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 NUDT17P0C025 328 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 LIMS3P0CW19 117 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 LIMS4P0CW20 117 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 VPREB1P12018 145 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 RAB3AP20336 220 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 NTF3P20783 257 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 ACP1P24666 158 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms