RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 DCPSQ96C86 337 aaKnown RBP3.11□□□□□ -1.91
TRIM4-205ENST00000496896 PPP1R36Q96LQ0 422 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 FER1L6-AS2Q96M78 137 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 PKMYT1Q99640 499 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 CTRCQ99895 268 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 INPP5KQ9BT40 448 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 CCDC32Q9BV29 185 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 FUNDC2Q9BWH2 189 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 SLC39A8Q9C0K1 460 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 OR10A4Q9H209 315 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 KAT8Q9H7Z6 458 aaKnown RBP3.11□□□□□ -1.91
TRIM4-205ENST00000496896 ACTR8Q9H981 624 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 NTN4Q9HB63 628 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 FANCEQ9HB96 536 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 DIABLOQ9NR28 239 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 DCAF13Q9NV06 445 aaKnown RBP3.11□□□□□ -1.91
TRIM4-205ENST00000496896 MTRRQ9UBK8 725 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 TRMT6Q9UJA5 497 aaKnown RBP3.11□□□□□ -1.91
TRIM4-205ENST00000496896 PCTPQ9UKL6 214 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 SCML2Q9UQR0 700 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 HES2Q9Y543 173 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 MCM3APO60318 1980 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 ZNF638Q14966 1978 aaKnown RBP3.11□□□□□ -1.91
TRIM4-205ENST00000496896 NYNRINQ9P2P1 1898 aaKnown RBP3.1□□□□□ -1.91
TRIM4-205ENST00000496896 SYNJ2BP-COX16A0A087WUM0 186 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 A0A096LPI6 279 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 ATP6AP2A0A1C7CYW4 349 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 MYBPHLA2RUH7 354 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 ARRDC5A6NEK1 342 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 BOLA2-SMG1P6H3BVE0 249 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 CXCR6O00574 342 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 E2F3O00716 465 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 BCKDKO14874 412 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 RAD51BO15315 384 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 MAGEB3O15480 346 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 MLNRO43193 412 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 MPZL2O60487 215 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 PLOD3O60568 738 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 TRIM3O75382 744 aaPredicted RBP3.1□□□□□ -1.91
TRIM4-205ENST00000496896 ECI2O75521 394 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 UPK1BO75841 260 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 RHOBTB1O94844 696 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 SIX3O95343 332 aaPredicted RBP3.1□□□□□ -1.91
TRIM4-205ENST00000496896 GOT2P00505 430 aaKnown RBP3.1□□□□□ -1.91
TRIM4-205ENST00000496896 APOA1P02647 267 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 PGK2P07205 417 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 HCKP08631 526 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 ZNF286BP0CG31 522 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 SMIM10L2AP0DMW4 78 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 SMIM10L2BP0DMW5 78 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 RPS3P23396 243 aaKnown RBP eCLIP3.1□□□□□ -1.91
TRIM4-205ENST00000496896 IGFBP5P24593 272 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 S100A5P33763 92 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 SOX6P35712 828 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 CD86P42081 329 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 GSSP48637 474 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 ZNF140P52738 457 aaPredicted RBP3.1□□□□□ -1.91
TRIM4-205ENST00000496896 PLK1P53350 603 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 ATXN3P54252 364 aaPredicted RBP3.1□□□□□ -1.91
TRIM4-205ENST00000496896 LYZP61626 148 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 SLC35A2P78381 396 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 YWHAHQ04917 246 aaPredicted RBP3.1□□□□□ -1.91
TRIM4-205ENST00000496896 ELP6Q0PNE2 266 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 GRB7Q14451 532 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 OR4D1Q15615 310 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 MAPK11Q15759 364 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 CLPPQ16740 277 aaPredicted RBP3.1□□□□□ -1.91
TRIM4-205ENST00000496896 ZNF404Q494X3 552 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 GGTA1PQ4G0N0 100 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 RFTN2Q52LD8 501 aaPredicted RBP3.1□□□□□ -1.91
TRIM4-205ENST00000496896 PAGE3Q5JUK9 113 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 C1QTNF12Q5T7M4 302 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 UBE2UQ5VVX9 321 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 SHEQ5VZ18 495 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 KDM4DQ6B0I6 523 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 TWF2Q6IBS0 349 aaKnown RBP3.1□□□□□ -1.91
TRIM4-205ENST00000496896 TMEM53Q6P2H8 277 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 PNCKQ6P2M8 343 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 NEK5Q6P3R8 708 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 XKRXQ6PP77 449 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 DLEU7Q6UYE1 221 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 AKAP14Q86UN6 197 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 ITIH5Q86UX2 942 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 CALHM3Q86XJ0 350 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 MMAAQ8IVH4 418 aaKnown RBP3.1□□□□□ -1.91
TRIM4-205ENST00000496896 SLC30A8Q8IWU4 369 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 MICU2Q8IYU8 434 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 ZNF683Q8IZ20 524 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 OFCC1Q8IZS5 231 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 Q8N7P7 452 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 OR6Q1Q8NGQ2 317 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 GRPEL2Q8TAA5 225 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 BLOC1S5Q8TDH9 187 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 C2orf15Q8WU43 125 aaKnown RBP3.1□□□□□ -1.91
TRIM4-205ENST00000496896 SNRNP27Q8WVK2 155 aaKnown RBP3.1□□□□□ -1.91
TRIM4-205ENST00000496896 ANKRD49Q8WVL7 239 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 MYDGFQ969H8 173 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 NCLNQ969V3 563 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 FAM162AQ96A26 154 aa3.1□□□□□ -1.91
TRIM4-205ENST00000496896 MYLPFQ96A32 169 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms