RNA–Protein interactions for RNA: ENST00000496104.1

XPA-204, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 3

Gene XPA, Length 429 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-204ENST00000496104 RAB1CQ92928 201 aa4.03□□□□□ -1.76
XPA-204ENST00000496104 ORAI1Q96D31 301 aa4.03□□□□□ -1.76
XPA-204ENST00000496104 STARD4Q96DR4 205 aa4.03□□□□□ -1.76
XPA-204ENST00000496104 PTCD3Q96EY7 689 aaKnown RBP4.03□□□□□ -1.76
XPA-204ENST00000496104 ZNF570Q96NI8 536 aa4.03□□□□□ -1.76
XPA-204ENST00000496104 FOXN4Q96NZ1 517 aa4.03□□□□□ -1.76
XPA-204ENST00000496104 OR1F2PQ96R84 312 aa4.03□□□□□ -1.76
XPA-204ENST00000496104 PEBP4Q96S96 227 aa4.03□□□□□ -1.76
XPA-204ENST00000496104 SLC29A1Q99808 456 aa4.03□□□□□ -1.76
XPA-204ENST00000496104 SLC6A7Q99884 636 aa4.03□□□□□ -1.76
XPA-204ENST00000496104 OPN3Q9H1Y3 402 aaPredicted RBP4.03□□□□□ -1.76
XPA-204ENST00000496104 GEMIN7Q9H840 131 aaKnown RBP4.03□□□□□ -1.76
XPA-204ENST00000496104 NT5MQ9NPB1 228 aa4.03□□□□□ -1.76
XPA-204ENST00000496104 GAGE2DQ9UEU5 116 aa4.03□□□□□ -1.76
XPA-204ENST00000496104 KCNE5Q9UJ90 142 aa4.03□□□□□ -1.76
XPA-204ENST00000496104 PACSIN3Q9UKS6 424 aa4.03□□□□□ -1.76
XPA-204ENST00000496104 AMFRQ9UKV5 643 aa4.03□□□□□ -1.76
XPA-204ENST00000496104 PACSIN2Q9UNF0 486 aaPredicted RBP4.03□□□□□ -1.76
XPA-204ENST00000496104 ATG4BQ9Y4P1 393 aa4.03□□□□□ -1.76
XPA-204ENST00000496104 KLK4Q9Y5K2 254 aa4.03□□□□□ -1.76
XPA-204ENST00000496104 MAD1L1Q9Y6D9 718 aa4.03□□□□□ -1.76
XPA-204ENST00000496104 A3GALT2U3KPV4 340 aa4.03□□□□□ -1.76
XPA-204ENST00000496104 KMT2AQ03164 3969 aa4.03□□□□□ -1.76
XPA-204ENST00000496104 ARFGEF3Q5TH69 2177 aa4.03□□□□□ -1.76
XPA-204ENST00000496104 LOC105371242A0A075B767 164 aa4.02□□□□□ -1.77
XPA-204ENST00000496104 A0A0J9YVX5 310 aa4.02□□□□□ -1.77
XPA-204ENST00000496104 A0A1W2PPV4 95 aa4.02□□□□□ -1.77
XPA-204ENST00000496104 TCRBV7S3A2A0A539 114 aa4.02□□□□□ -1.77
XPA-204ENST00000496104 SMCO3A2RU48 225 aa4.02□□□□□ -1.77
XPA-204ENST00000496104 DIRC3C9JPN6 131 aa4.02□□□□□ -1.77
XPA-204ENST00000496104 K7EIL1 84 aa4.02□□□□□ -1.77
XPA-204ENST00000496104 AP4M1O00189 453 aa4.02□□□□□ -1.77
XPA-204ENST00000496104 NR5A2O00482 541 aa4.02□□□□□ -1.77
XPA-204ENST00000496104 VCYO14598 125 aa4.02□□□□□ -1.77
XPA-204ENST00000496104 ARPC3O15145 178 aa4.02□□□□□ -1.77
XPA-204ENST00000496104 STX7O15400 261 aaKnown RBP4.02□□□□□ -1.77
XPA-204ENST00000496104 CLPXO76031 633 aa4.02□□□□□ -1.77
XPA-204ENST00000496104 RCBTB2O95199 551 aa4.02□□□□□ -1.77
XPA-204ENST00000496104 SHMT2P34897 504 aa4.02□□□□□ -1.77
XPA-204ENST00000496104 SOX3P41225 446 aa4.02□□□□□ -1.77
XPA-204ENST00000496104 PTGFRP43088 359 aa4.02□□□□□ -1.77
XPA-204ENST00000496104 NR4A2P43354 598 aa4.02□□□□□ -1.77
XPA-204ENST00000496104 RPL21P46778 160 aaKnown RBP4.02□□□□□ -1.77
XPA-204ENST00000496104 ARHGDIBP52566 201 aa4.02□□□□□ -1.77
XPA-204ENST00000496104 RPL26P61254 145 aaKnown RBP4.02□□□□□ -1.77
XPA-204ENST00000496104 TSPAN5P62079 268 aa4.02□□□□□ -1.77
XPA-204ENST00000496104 KIR2DS3Q14952 304 aa4.02□□□□□ -1.77
XPA-204ENST00000496104 TRIP10Q15642 601 aa4.02□□□□□ -1.77
XPA-204ENST00000496104 STX1AQ16623 288 aa4.02□□□□□ -1.77
XPA-204ENST00000496104 RGS21Q2M5E4 152 aa4.02□□□□□ -1.77
XPA-204ENST00000496104 ZNF672Q499Z4 452 aaPredicted RBP4.02□□□□□ -1.77
XPA-204ENST00000496104 TEX44Q53QW1 395 aa4.02□□□□□ -1.77
XPA-204ENST00000496104 PPP6R3Q5H9R7 873 aaPredicted RBP4.02□□□□□ -1.77
XPA-204ENST00000496104 PDZK1Q5T2W1 519 aa4.02□□□□□ -1.77
XPA-204ENST00000496104 GGNBP1Q5YKI7 109 aa4.02□□□□□ -1.77
XPA-204ENST00000496104 HIST2H2AA3Q6FI13 130 aa4.02□□□□□ -1.77
XPA-204ENST00000496104 METTL2BQ6P1Q9 378 aaKnown RBP4.02□□□□□ -1.77
XPA-204ENST00000496104 TTC27Q6P3X3 843 aa4.02□□□□□ -1.77
XPA-204ENST00000496104 C2orf73Q8N5S3 287 aaPredicted RBP4.02□□□□□ -1.77
XPA-204ENST00000496104 SYT14Q8NB59 555 aa4.02□□□□□ -1.77
XPA-204ENST00000496104 OR4N2Q8NGD1 307 aa4.02□□□□□ -1.77
XPA-204ENST00000496104 OR5D13Q8NGL4 314 aa4.02□□□□□ -1.77
XPA-204ENST00000496104 NDNFQ8TB73 568 aa4.02□□□□□ -1.77
XPA-204ENST00000496104 ZNF418Q8TF45 676 aaPredicted RBP4.02□□□□□ -1.77
XPA-204ENST00000496104 SPRYD4Q8WW59 207 aaPredicted RBP4.02□□□□□ -1.77
XPA-204ENST00000496104 SNAPC3Q92966 411 aa4.02□□□□□ -1.77
XPA-204ENST00000496104 SLC38A4Q969I6 547 aa4.02□□□□□ -1.77
XPA-204ENST00000496104 LRRC58Q96CX6 371 aa4.02□□□□□ -1.77
XPA-204ENST00000496104 R3HDM4Q96D70 268 aa4.02□□□□□ -1.77
XPA-204ENST00000496104 CHMP6Q96FZ7 201 aa4.02□□□□□ -1.77
XPA-204ENST00000496104 METTL2AQ96IZ6 378 aaKnown RBP4.02□□□□□ -1.77
XPA-204ENST00000496104 IL17FQ96PD4 163 aa4.02□□□□□ -1.77
XPA-204ENST00000496104 KRT12Q99456 494 aa4.02□□□□□ -1.77
XPA-204ENST00000496104 TSG101Q99816 390 aa4.02□□□□□ -1.77
XPA-204ENST00000496104 FAM173AQ9BQD7 235 aa4.02□□□□□ -1.77
XPA-204ENST00000496104 FNDC11Q9BVV2 318 aa4.02□□□□□ -1.77
XPA-204ENST00000496104 C1QTNF3Q9BXJ4 246 aa4.02□□□□□ -1.77
XPA-204ENST00000496104 MAGT1Q9H0U3 335 aa4.02□□□□□ -1.77
XPA-204ENST00000496104 RANBP3Q9H6Z4 567 aaPredicted RBP4.02□□□□□ -1.77
XPA-204ENST00000496104 DCLRE1BQ9H816 532 aa4.02□□□□□ -1.77
XPA-204ENST00000496104 MARCH7Q9H992 704 aa4.02□□□□□ -1.77
XPA-204ENST00000496104 SEC61A2Q9H9S3 476 aa4.02□□□□□ -1.77
XPA-204ENST00000496104 ACKR4Q9NPB9 350 aa4.02□□□□□ -1.77
XPA-204ENST00000496104 NKIRAS1Q9NYS0 192 aa4.02□□□□□ -1.77
XPA-204ENST00000496104 ONECUT1Q9UBC0 465 aa4.02□□□□□ -1.77
XPA-204ENST00000496104 CLCF1Q9UBD9 225 aa4.02□□□□□ -1.77
XPA-204ENST00000496104 CIDEBQ9UHD4 219 aa4.02□□□□□ -1.77
XPA-204ENST00000496104 IKZF3Q9UKT9 509 aa4.02□□□□□ -1.77
XPA-204ENST00000496104 RNF150Q9ULK6 438 aa4.02□□□□□ -1.77
XPA-204ENST00000496104 OAZ3Q9UMX2 235 aa4.02□□□□□ -1.77
XPA-204ENST00000496104 RPL26L1Q9UNX3 145 aaKnown RBP4.02□□□□□ -1.77
XPA-204ENST00000496104 HEBP2Q9Y5Z4 205 aa4.02□□□□□ -1.77
XPA-204ENST00000496104 HEATR5BQ9P2D3 2071 aa4.02□□□□□ -1.77
XPA-204ENST00000496104 DNAH11Q96DT5 4516 aa4.02□□□□□ -1.77
XPA-204ENST00000496104 SCN3AQ9NY46 2000 aa4.01□□□□□ -1.77
XPA-204ENST00000496104 IGKV1-8A0A0C4DH67 115 aa4.01□□□□□ -1.77
XPA-204ENST00000496104 IQANK1A0A1B0GTG1 560 aa4.01□□□□□ -1.77
XPA-204ENST00000496104 A0A1W2PPV9 198 aa4.01□□□□□ -1.77
XPA-204ENST00000496104 TCRBV5S1A1TA0A578 114 aa4.01□□□□□ -1.77
XPA-204ENST00000496104 SLC5A10A0PJK1 596 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms