RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 DEFB112Q30KQ8 113 aa8.12□□□□□ -1.11
SMARCAL1-213ENST00000496037 NDUFAF6Q330K2 333 aa8.12□□□□□ -1.11
SMARCAL1-213ENST00000496037 PCGF3Q3KNV8 242 aa8.12□□□□□ -1.11
SMARCAL1-213ENST00000496037 CCNJQ5T5M9 372 aa8.12□□□□□ -1.11
SMARCAL1-213ENST00000496037 METTL2BQ6P1Q9 378 aaKnown RBP8.12□□□□□ -1.11
SMARCAL1-213ENST00000496037 TMEM154Q6P9G4 183 aa8.12□□□□□ -1.11
SMARCAL1-213ENST00000496037 CCDC137Q6PK04 289 aaKnown RBP8.12□□□□□ -1.11
SMARCAL1-213ENST00000496037 ZBED8Q8IZ13 594 aa8.12□□□□□ -1.11
SMARCAL1-213ENST00000496037 TMEM86BQ8N661 226 aa8.12□□□□□ -1.11
SMARCAL1-213ENST00000496037 OR5W2Q8NH69 310 aa8.12□□□□□ -1.11
SMARCAL1-213ENST00000496037 CDC26Q8NHZ8 85 aa8.12□□□□□ -1.11
SMARCAL1-213ENST00000496037 SNX33Q8WV41 574 aa8.12□□□□□ -1.11
SMARCAL1-213ENST00000496037 TMEM234Q8WY98 164 aa8.12□□□□□ -1.11
SMARCAL1-213ENST00000496037 ST8SIA1Q92185 356 aa8.12□□□□□ -1.11
SMARCAL1-213ENST00000496037 BCL2L2Q92843 193 aaPredicted RBP8.12□□□□□ -1.11
SMARCAL1-213ENST00000496037 TMEM45BQ96B21 275 aa8.12□□□□□ -1.11
SMARCAL1-213ENST00000496037 AURKBQ96GD4 344 aaPredicted RBP8.12□□□□□ -1.11
SMARCAL1-213ENST00000496037 GPR22Q99680 433 aa8.12□□□□□ -1.11
SMARCAL1-213ENST00000496037 GLIPR2Q9H4G4 154 aa8.12□□□□□ -1.11
SMARCAL1-213ENST00000496037 RABL2AQ9UBK7 228 aaPredicted RBP8.12□□□□□ -1.11
SMARCAL1-213ENST00000496037 VPS29Q9UBQ0 182 aa8.12□□□□□ -1.11
SMARCAL1-213ENST00000496037 RNF14Q9UBS8 474 aa8.12□□□□□ -1.11
SMARCAL1-213ENST00000496037 DUSP13Q9UII6 198 aa8.12□□□□□ -1.11
SMARCAL1-213ENST00000496037 GPR160Q9UJ42 338 aa8.12□□□□□ -1.11
SMARCAL1-213ENST00000496037 FZR1Q9UM11 496 aa8.12□□□□□ -1.11
SMARCAL1-213ENST00000496037 SNX6Q9UNH7 406 aa8.12□□□□□ -1.11
SMARCAL1-213ENST00000496037 HDGFL3Q9Y3E1 203 aa8.12□□□□□ -1.11
SMARCAL1-213ENST00000496037 INSIG2Q9Y5U4 225 aa8.12□□□□□ -1.11
SMARCAL1-213ENST00000496037 HERC2O95714 4834 aa8.12□□□□□ -1.11
SMARCAL1-213ENST00000496037 TRIM49D1C9J1S8 452 aa8.11□□□□□ -1.11
SMARCAL1-213ENST00000496037 PTGES3LE9PB15 166 aa8.11□□□□□ -1.11
SMARCAL1-213ENST00000496037 H0YHG0 523 aa8.11□□□□□ -1.11
SMARCAL1-213ENST00000496037 ETV2O00321 342 aaPredicted RBP8.11□□□□□ -1.11
SMARCAL1-213ENST00000496037 TRAF3IP2O43734 574 aaPredicted RBP8.11□□□□□ -1.11
SMARCAL1-213ENST00000496037 IFI6P09912 130 aa8.11□□□□□ -1.11
SMARCAL1-213ENST00000496037 ACP2P11117 423 aa8.11□□□□□ -1.11
SMARCAL1-213ENST00000496037 DDCP20711 480 aa8.11□□□□□ -1.11
SMARCAL1-213ENST00000496037 GRK5P34947 590 aa8.11□□□□□ -1.11
SMARCAL1-213ENST00000496037 GLRXP35754 106 aa8.11□□□□□ -1.11
SMARCAL1-213ENST00000496037 PAFAH1B1P43034 410 aa8.11□□□□□ -1.11
SMARCAL1-213ENST00000496037 CRYBB2P43320 205 aa8.11□□□□□ -1.11
SMARCAL1-213ENST00000496037 CAPZA2P47755 286 aa8.11□□□□□ -1.11
SMARCAL1-213ENST00000496037 SH3BGRP55822 239 aaPredicted RBP8.11□□□□□ -1.11
SMARCAL1-213ENST00000496037 VSNL1P62760 191 aa8.11□□□□□ -1.11
SMARCAL1-213ENST00000496037 GALK2Q01415 458 aa8.11□□□□□ -1.11
SMARCAL1-213ENST00000496037 PPP1R7Q15435 360 aa8.11□□□□□ -1.11
SMARCAL1-213ENST00000496037 SEC23BQ15437 767 aa8.11□□□□□ -1.11
SMARCAL1-213ENST00000496037 TBCEQ15813 527 aaPredicted RBP8.11□□□□□ -1.11
SMARCAL1-213ENST00000496037 MSMPQ1L6U9 139 aa8.11□□□□□ -1.11
SMARCAL1-213ENST00000496037 ALKBH6Q3KRA9 238 aa8.11□□□□□ -1.11
SMARCAL1-213ENST00000496037 GGTA1PQ4G0N0 100 aa8.11□□□□□ -1.11
SMARCAL1-213ENST00000496037 DEFB121Q5J5C9 76 aa8.11□□□□□ -1.11
SMARCAL1-213ENST00000496037 LRIG3Q6UXM1 1119 aa8.11□□□□□ -1.11
SMARCAL1-213ENST00000496037 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.11□□□□□ -1.11
SMARCAL1-213ENST00000496037 KRT73Q86Y46 540 aa8.11□□□□□ -1.11
SMARCAL1-213ENST00000496037 C16orf78Q8WTQ4 265 aa8.11□□□□□ -1.11
SMARCAL1-213ENST00000496037 STON2Q8WXE9 905 aa8.11□□□□□ -1.11
SMARCAL1-213ENST00000496037 HOXB13Q92826 284 aaPredicted RBP8.11□□□□□ -1.11
SMARCAL1-213ENST00000496037 PHF21AQ96BD5 680 aa8.11□□□□□ -1.11
SMARCAL1-213ENST00000496037 CHMP6Q96FZ7 201 aa8.11□□□□□ -1.11
SMARCAL1-213ENST00000496037 CLPTM1LQ96KA5 538 aa8.11□□□□□ -1.11
SMARCAL1-213ENST00000496037 AMDHD1Q96NU7 426 aa8.11□□□□□ -1.11
SMARCAL1-213ENST00000496037 NAA11Q9BSU3 229 aaPredicted RBP8.11□□□□□ -1.11
SMARCAL1-213ENST00000496037 HOXD1Q9GZZ0 328 aa8.11□□□□□ -1.11
SMARCAL1-213ENST00000496037 NOX4Q9NPH5 578 aa8.11□□□□□ -1.11
SMARCAL1-213ENST00000496037 SIRT3Q9NTG7 399 aaPredicted RBP8.11□□□□□ -1.11
SMARCAL1-213ENST00000496037 DECR2Q9NUI1 292 aa8.11□□□□□ -1.11
SMARCAL1-213ENST00000496037 GIN1Q9NXP7 522 aa8.11□□□□□ -1.11
SMARCAL1-213ENST00000496037 MYEF2Q9P2K5 600 aaKnown RBP8.11□□□□□ -1.11
SMARCAL1-213ENST00000496037 COA3Q9Y2R0 106 aaPredicted RBP8.11□□□□□ -1.11
SMARCAL1-213ENST00000496037 POMT1Q9Y6A1 747 aa8.11□□□□□ -1.11
SMARCAL1-213ENST00000496037 TENM2Q9NT68 2774 aa8.11□□□□□ -1.11
SMARCAL1-213ENST00000496037 RYR1P21817 5038 aa8.11□□□□□ -1.11
SMARCAL1-213ENST00000496037 PLXNB1O43157 2135 aa8.11□□□□□ -1.11
SMARCAL1-213ENST00000496037 TET2Q6N021 2002 aaPredicted RBP8.1□□□□□ -1.11
SMARCAL1-213ENST00000496037 C17orf100A8MU93 164 aa8.1□□□□□ -1.11
SMARCAL1-213ENST00000496037 DNALI1O14645 258 aaPredicted RBP8.1□□□□□ -1.11
SMARCAL1-213ENST00000496037 ZNF264O43296 627 aa8.1□□□□□ -1.11
SMARCAL1-213ENST00000496037 EIF1BO60739 113 aaKnown RBP8.1□□□□□ -1.11
SMARCAL1-213ENST00000496037 FMO6PO60774 539 aa8.1□□□□□ -1.11
SMARCAL1-213ENST00000496037 CYP7B1O75881 506 aa8.1□□□□□ -1.11
SMARCAL1-213ENST00000496037 SFTPBP07988 381 aa8.1□□□□□ -1.11
SMARCAL1-213ENST00000496037 UBL4AP11441 157 aa8.1□□□□□ -1.11
SMARCAL1-213ENST00000496037 FUT4P22083 530 aa8.1□□□□□ -1.11
SMARCAL1-213ENST00000496037 MAPK3P27361 379 aaPredicted RBP8.1□□□□□ -1.11
SMARCAL1-213ENST00000496037 MAP3K8P41279 467 aa8.1□□□□□ -1.11
SMARCAL1-213ENST00000496037 GSTM5P46439 218 aa8.1□□□□□ -1.11
SMARCAL1-213ENST00000496037 FNTAP49354 379 aa8.1□□□□□ -1.11
SMARCAL1-213ENST00000496037 SELENOVP59797 346 aa8.1□□□□□ -1.11
SMARCAL1-213ENST00000496037 POU6F2P78424 691 aaPredicted RBP8.1□□□□□ -1.11
SMARCAL1-213ENST00000496037 ACSM2AQ08AH3 577 aa8.1□□□□□ -1.11
SMARCAL1-213ENST00000496037 DLG1Q12959 904 aa8.1□□□□□ -1.11
SMARCAL1-213ENST00000496037 HSPB3Q12988 150 aa8.1□□□□□ -1.11
SMARCAL1-213ENST00000496037 TRAF3Q13114 568 aa8.1□□□□□ -1.11
SMARCAL1-213ENST00000496037 RAB39AQ14964 217 aa8.1□□□□□ -1.11
SMARCAL1-213ENST00000496037 DUSP5Q16690 384 aa8.1□□□□□ -1.11
SMARCAL1-213ENST00000496037 TRMT5Q32P41 509 aaKnown RBP8.1□□□□□ -1.11
SMARCAL1-213ENST00000496037 NRN1LQ496H8 165 aa8.1□□□□□ -1.11
SMARCAL1-213ENST00000496037 SPIN4Q56A73 249 aa8.1□□□□□ -1.11
SMARCAL1-213ENST00000496037 ACSM2BQ68CK6 577 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms