RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, human

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-233	ENST00000496030		Q71RC1	249 aa	Predicted RBP	10.49	□□□□□ -0.73
APTX-233	ENST00000496030	LINGO2	Q7L985	606 aa		10.49	□□□□□ -0.73
APTX-233	ENST00000496030	RRM2B	Q7LG56	351 aa		10.49	□□□□□ -0.73
APTX-233	ENST00000496030	OAF	Q86UD1	273 aa		10.49	□□□□□ -0.73
APTX-233	ENST00000496030	UEVLD	Q8IX04	471 aa		10.49	□□□□□ -0.73
APTX-233	ENST00000496030	ZNF100	Q8IYN0	542 aa		10.49	□□□□□ -0.73
APTX-233	ENST00000496030	CDK20	Q8IZL9	346 aa		10.49	□□□□□ -0.73
APTX-233	ENST00000496030	ANKK1	Q8NFD2	765 aa		10.49	□□□□□ -0.73
APTX-233	ENST00000496030	OR9Q2	Q8NGE9	314 aa		10.49	□□□□□ -0.73
APTX-233	ENST00000496030	APH1A	Q96BI3	265 aa		10.49	□□□□□ -0.73
APTX-233	ENST00000496030	OR2M2	Q96R28	347 aa		10.49	□□□□□ -0.73
APTX-233	ENST00000496030	EMC6	Q9BV81	110 aa		10.49	□□□□□ -0.73
APTX-233	ENST00000496030	REEP1	Q9H902	201 aa		10.49	□□□□□ -0.73
APTX-233	ENST00000496030	ELOVL5	Q9NYP7	299 aa		10.49	□□□□□ -0.73
APTX-233	ENST00000496030	MALT1	Q9UDY8	824 aa		10.49	□□□□□ -0.73
APTX-233	ENST00000496030	TMCC3	Q9ULS5	477 aa		10.49	□□□□□ -0.73
APTX-233	ENST00000496030	RCE1	Q9Y256	329 aa		10.49	□□□□□ -0.73
APTX-233	ENST00000496030	SAMHD1	Q9Y3Z3	626 aa	Known RBP	10.49	□□□□□ -0.73
APTX-233	ENST00000496030	AP4S1	Q9Y587	144 aa		10.49	□□□□□ -0.73
APTX-233	ENST00000496030		U3KQV3	271 aa		10.49	□□□□□ -0.73
APTX-233	ENST00000496030	NBEAL1	Q6ZS30	2694 aa		10.48	□□□□□ -0.73
APTX-233	ENST00000496030	SLC35F4	A4IF30	521 aa		10.48	□□□□□ -0.73
APTX-233	ENST00000496030	UNC119B	A6NIH7	251 aa		10.48	□□□□□ -0.73
APTX-233	ENST00000496030	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	10.48	□□□□□ -0.73
APTX-233	ENST00000496030	ANKRD65	E5RJM6	399 aa		10.48	□□□□□ -0.73
APTX-233	ENST00000496030	RNF13	O43567	381 aa		10.48	□□□□□ -0.73
APTX-233	ENST00000496030	OR10H3	O60404	316 aa		10.48	□□□□□ -0.73
APTX-233	ENST00000496030	UPK3A	O75631	287 aa		10.48	□□□□□ -0.73
APTX-233	ENST00000496030	OR6A2	O95222	327 aa		10.48	□□□□□ -0.73
APTX-233	ENST00000496030	CNOT4	O95628	575 aa	Known RBP	10.48	□□□□□ -0.73
APTX-233	ENST00000496030	ADA	P00813	363 aa		10.48	□□□□□ -0.73
APTX-233	ENST00000496030	SAG	P10523	405 aa	Predicted RBP	10.48	□□□□□ -0.73
APTX-233	ENST00000496030	IGHV1-2	P23083	117 aa		10.48	□□□□□ -0.73
APTX-233	ENST00000496030	FPR3	P25089	353 aa		10.48	□□□□□ -0.73
APTX-233	ENST00000496030	UGT2B10	P36537	528 aa		10.48	□□□□□ -0.73
APTX-233	ENST00000496030	RUNX1T1	Q06455	604 aa		10.48	□□□□□ -0.73
APTX-233	ENST00000496030	SNTB1	Q13884	538 aa	Known RBP	10.48	□□□□□ -0.73
APTX-233	ENST00000496030	GK3P	Q14409	553 aa		10.48	□□□□□ -0.73
APTX-233	ENST00000496030	ATP6AP1	Q15904	470 aa		10.48	□□□□□ -0.73
APTX-233	ENST00000496030	ANKDD1A	Q495B1	522 aa		10.48	□□□□□ -0.73
APTX-233	ENST00000496030	PHYHD1	Q5SRE7	291 aa		10.48	□□□□□ -0.73
APTX-233	ENST00000496030	ARMC4	Q5T2S8	1044 aa		10.48	□□□□□ -0.73
APTX-233	ENST00000496030	HMBOX1	Q6NT76	420 aa		10.48	□□□□□ -0.73
APTX-233	ENST00000496030	THSD4	Q6ZMP0	1018 aa		10.48	□□□□□ -0.73
APTX-233	ENST00000496030	BEND4	Q6ZU67	534 aa		10.48	□□□□□ -0.73
APTX-233	ENST00000496030	SLC35D2	Q76EJ3	337 aa		10.48	□□□□□ -0.73
APTX-233	ENST00000496030	STK32C	Q86UX6	486 aa		10.48	□□□□□ -0.73
APTX-233	ENST00000496030	DMRTC2	Q8IXT2	367 aa	Predicted RBP	10.48	□□□□□ -0.73
APTX-233	ENST00000496030	HS3ST5	Q8IZT8	346 aa		10.48	□□□□□ -0.73
APTX-233	ENST00000496030	SMR3A	Q99954	134 aa		10.48	□□□□□ -0.73
APTX-233	ENST00000496030	LINC00470	Q9BZP3	86 aa		10.48	□□□□□ -0.73
APTX-233	ENST00000496030	YY1AP1	Q9H869	796 aa		10.48	□□□□□ -0.73
APTX-233	ENST00000496030	INIP	Q9NRY2	104 aa		10.48	□□□□□ -0.73
APTX-233	ENST00000496030	FOXD3	Q9UJU5	478 aa	Predicted RBP	10.48	□□□□□ -0.73
APTX-233	ENST00000496030	MAGED1	Q9Y5V3	778 aa	Predicted RBP	10.48	□□□□□ -0.73
APTX-233	ENST00000496030	NPIPB13	A6NJU9	1138 aa		10.47	□□□□□ -0.73
APTX-233	ENST00000496030	NPIPB4	C9JG80	1138 aa		10.47	□□□□□ -0.73
APTX-233	ENST00000496030	MCIDAS	D6RGH6	385 aa		10.47	□□□□□ -0.73
APTX-233	ENST00000496030	ENTPD5	O75356	428 aa		10.47	□□□□□ -0.73
APTX-233	ENST00000496030	SERPINI2	O75830	405 aa		10.47	□□□□□ -0.73
APTX-233	ENST00000496030	CCNB2	O95067	398 aa		10.47	□□□□□ -0.73
APTX-233	ENST00000496030	TP53	P04637	393 aa	Predicted RBP	10.47	□□□□□ -0.73
APTX-233	ENST00000496030	ITGA5	P08648	1049 aa		10.47	□□□□□ -0.73
APTX-233	ENST00000496030	PSMB1	P20618	241 aa	Known RBP	10.47	□□□□□ -0.73
APTX-233	ENST00000496030	COX5A	P20674	150 aa		10.47	□□□□□ -0.73
APTX-233	ENST00000496030	PRKACG	P22612	351 aa		10.47	□□□□□ -0.73
APTX-233	ENST00000496030	BID	P55957	195 aa		10.47	□□□□□ -0.73
APTX-233	ENST00000496030	SORD	Q00796	357 aa		10.47	□□□□□ -0.73
APTX-233	ENST00000496030	IL1RL1	Q01638	556 aa		10.47	□□□□□ -0.73
APTX-233	ENST00000496030	TSPAN31	Q12999	210 aa		10.47	□□□□□ -0.73
APTX-233	ENST00000496030	P2RY6	Q15077	328 aa		10.47	□□□□□ -0.73
APTX-233	ENST00000496030	TSC22D1	Q15714	1073 aa		10.47	□□□□□ -0.73
APTX-233	ENST00000496030	ACKR1	Q16570	336 aa		10.47	□□□□□ -0.73
APTX-233	ENST00000496030	ALG10	Q5BKT4	473 aa		10.47	□□□□□ -0.73
APTX-233	ENST00000496030	SFRP5	Q5T4F7	317 aa		10.47	□□□□□ -0.73
APTX-233	ENST00000496030	ANKRD34A	Q69YU3	496 aa		10.47	□□□□□ -0.73
APTX-233	ENST00000496030	NIPAL3	Q6P499	406 aa		10.47	□□□□□ -0.73
APTX-233	ENST00000496030	IGFN1	Q86VF2	1251 aa		10.47	□□□□□ -0.73
APTX-233	ENST00000496030	CXorf67	Q86X51	503 aa	Predicted RBP	10.47	□□□□□ -0.73
APTX-233	ENST00000496030	PRIMA1	Q86XR5	153 aa		10.47	□□□□□ -0.73
APTX-233	ENST00000496030	KIF18B	Q86Y91	864 aa		10.47	□□□□□ -0.73
APTX-233	ENST00000496030	C20orf196	Q8IYI0	205 aa		10.47	□□□□□ -0.73
APTX-233	ENST00000496030	LINC00471	Q8N535	108 aa		10.47	□□□□□ -0.73
APTX-233	ENST00000496030	ZNF433	Q8N7K0	673 aa	Predicted RBP	10.47	□□□□□ -0.73
APTX-233	ENST00000496030	OR6X1	Q8NH79	312 aa		10.47	□□□□□ -0.73
APTX-233	ENST00000496030	GNPDA2	Q8TDQ7	276 aa		10.47	□□□□□ -0.73
APTX-233	ENST00000496030	PYDC1	Q8WXC3	89 aa		10.47	□□□□□ -0.73
APTX-233	ENST00000496030	LRTOMT	Q8WZ04	291 aa		10.47	□□□□□ -0.73
APTX-233	ENST00000496030	NMD3	Q96D46	503 aa	Known RBP	10.47	□□□□□ -0.73
APTX-233	ENST00000496030	ZNF837	Q96EG3	531 aa	Predicted RBP	10.47	□□□□□ -0.73
APTX-233	ENST00000496030	RAB3IP	Q96QF0	476 aa	Predicted RBP	10.47	□□□□□ -0.73
APTX-233	ENST00000496030	FEV	Q99581	238 aa		10.47	□□□□□ -0.73
APTX-233	ENST00000496030	FOXC2	Q99958	501 aa		10.47	□□□□□ -0.73
APTX-233	ENST00000496030	DGCR6L	Q9BY27	220 aa		10.47	□□□□□ -0.73
APTX-233	ENST00000496030	MRPL13	Q9BYD1	178 aa	Known RBP	10.47	□□□□□ -0.73
APTX-233	ENST00000496030	SLCO5A1	Q9H2Y9	848 aa		10.47	□□□□□ -0.73
APTX-233	ENST00000496030	ARRDC5	A6NEK1	342 aa		10.46	□□□□□ -0.73
APTX-233	ENST00000496030	C16orf97	H3BN30	126 aa		10.46	□□□□□ -0.73
APTX-233	ENST00000496030	DEAF1	O75398	565 aa	Predicted RBP	10.46	□□□□□ -0.73
APTX-233	ENST00000496030	IGHM	P01871	453 aa		10.46	□□□□□ -0.73

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