RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 OR51F2Q8NH61 342 aa8.29□□□□□ -1.08
UBR4-216ENST00000494503 SNX33Q8WV41 574 aa8.29□□□□□ -1.08
UBR4-216ENST00000494503 DNAJA4Q8WW22 397 aaPredicted RBP8.29□□□□□ -1.08
UBR4-216ENST00000494503 RDH5Q92781 318 aa8.29□□□□□ -1.08
UBR4-216ENST00000494503 FOXB1Q99853 325 aa8.29□□□□□ -1.08
UBR4-216ENST00000494503 RNF121Q9H920 327 aa8.29□□□□□ -1.08
UBR4-216ENST00000494503 TMEM27Q9HBJ8 222 aa8.29□□□□□ -1.08
UBR4-216ENST00000494503 SSU72Q9NP77 194 aaKnown RBP8.29□□□□□ -1.08
UBR4-216ENST00000494503 ZNF275Q9NSD4 429 aaPredicted RBP8.29□□□□□ -1.08
UBR4-216ENST00000494503 THAP1Q9NVV9 213 aa8.29□□□□□ -1.08
UBR4-216ENST00000494503 HAO1Q9UJM8 370 aa8.29□□□□□ -1.08
UBR4-216ENST00000494503 CHST2Q9Y4C5 530 aa8.29□□□□□ -1.08
UBR4-216ENST00000494503 ANK2Q01484 3957 aa8.29□□□□□ -1.08
UBR4-216ENST00000494503 A0A087WUJ7 227 aa8.28□□□□□ -1.08
UBR4-216ENST00000494503 SLCO1B7G3V0H7 640 aa8.28□□□□□ -1.08
UBR4-216ENST00000494503 TRAF3IP2O43734 574 aaPredicted RBP8.28□□□□□ -1.08
UBR4-216ENST00000494503 UBL3O95164 117 aa8.28□□□□□ -1.08
UBR4-216ENST00000494503 HPRP00739 348 aa8.28□□□□□ -1.08
UBR4-216ENST00000494503 LCKP06239 509 aa8.28□□□□□ -1.08
UBR4-216ENST00000494503 PATE4P0C8F1 98 aa8.28□□□□□ -1.08
UBR4-216ENST00000494503 ZCCHC18P0CG32 403 aa8.28□□□□□ -1.08
UBR4-216ENST00000494503 ADORA3P0DMS8 318 aa8.28□□□□□ -1.08
UBR4-216ENST00000494503 BIDP55957 195 aa8.28□□□□□ -1.08
UBR4-216ENST00000494503 MVKQ03426 396 aa8.28□□□□□ -1.08
UBR4-216ENST00000494503 PUDPQ08623 228 aa8.28□□□□□ -1.08
UBR4-216ENST00000494503 MPP2Q14168 576 aa8.28□□□□□ -1.08
UBR4-216ENST00000494503 ELFN2Q5R3F8 820 aa8.28□□□□□ -1.08
UBR4-216ENST00000494503 AVPI1Q5T686 147 aa8.28□□□□□ -1.08
UBR4-216ENST00000494503 RGS7BPQ6MZT1 257 aaPredicted RBP8.28□□□□□ -1.08
UBR4-216ENST00000494503 TMEM154Q6P9G4 183 aa8.28□□□□□ -1.08
UBR4-216ENST00000494503 ULK3Q6PHR2 472 aa8.28□□□□□ -1.08
UBR4-216ENST00000494503 NET1Q7Z628 596 aaPredicted RBP8.28□□□□□ -1.08
UBR4-216ENST00000494503 C20orf196Q8IYI0 205 aa8.28□□□□□ -1.08
UBR4-216ENST00000494503 TMEM123Q8N131 208 aa8.28□□□□□ -1.08
UBR4-216ENST00000494503 GOLGA6L1Q8N7Z2 621 aa8.28□□□□□ -1.08
UBR4-216ENST00000494503 SLC47A1Q96FL8 570 aa8.28□□□□□ -1.08
UBR4-216ENST00000494503 TXNDC15Q96J42 360 aa8.28□□□□□ -1.08
UBR4-216ENST00000494503 TMEM109Q9BVC6 243 aa8.28□□□□□ -1.08
UBR4-216ENST00000494503 SPATA5L1Q9BVQ7 753 aa8.28□□□□□ -1.08
UBR4-216ENST00000494503 ZNF416Q9BWM5 594 aa8.28□□□□□ -1.08
UBR4-216ENST00000494503 CDH20Q9HBT6 801 aa8.28□□□□□ -1.08
UBR4-216ENST00000494503 A4GALTQ9NPC4 353 aa8.28□□□□□ -1.08
UBR4-216ENST00000494503 ZIM2Q9NZV7 527 aa8.28□□□□□ -1.08
UBR4-216ENST00000494503 KLHL14Q9P2G3 628 aa8.28□□□□□ -1.08
UBR4-216ENST00000494503 MYEF2Q9P2K5 600 aaKnown RBP8.28□□□□□ -1.08
UBR4-216ENST00000494503 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.28□□□□□ -1.08
UBR4-216ENST00000494503 ZNF346Q9UL40 294 aaKnown RBP8.28□□□□□ -1.08
UBR4-216ENST00000494503 PCDHB10Q9UN67 800 aa8.28□□□□□ -1.08
UBR4-216ENST00000494503 CORINQ9Y5Q5 1042 aa8.28□□□□□ -1.08
UBR4-216ENST00000494503 TENM1Q9UKZ4 2725 aa8.27□□□□□ -1.09
UBR4-216ENST00000494503 IGKV1D-42A0A075B6H8 117 aa8.27□□□□□ -1.09
UBR4-216ENST00000494503 LOC105371242A0A075B767 164 aa8.27□□□□□ -1.09
UBR4-216ENST00000494503 TMEM120BA0PK00 339 aa8.27□□□□□ -1.09
UBR4-216ENST00000494503 LRRN3E7EW58 273 aa8.27□□□□□ -1.09
UBR4-216ENST00000494503 MS4A18H0YCH9 400 aa8.27□□□□□ -1.09
UBR4-216ENST00000494503 TRIM77I1YAP6 450 aa8.27□□□□□ -1.09
UBR4-216ENST00000494503 KPNA4O00629 521 aaPredicted RBP8.27□□□□□ -1.09
UBR4-216ENST00000494503 WNT9BO14905 357 aa8.27□□□□□ -1.09
UBR4-216ENST00000494503 FARS2O95363 451 aaKnown RBP8.27□□□□□ -1.09
UBR4-216ENST00000494503 PNPP00491 289 aa8.27□□□□□ -1.09
UBR4-216ENST00000494503 TFP02787 698 aa8.27□□□□□ -1.09
UBR4-216ENST00000494503 GAAP10253 952 aa8.27□□□□□ -1.09
UBR4-216ENST00000494503 UMPSP11172 480 aa8.27□□□□□ -1.09
UBR4-216ENST00000494503 CCL2P13500 99 aa8.27□□□□□ -1.09
UBR4-216ENST00000494503 ZNF14P17017 642 aaPredicted RBP8.27□□□□□ -1.09
UBR4-216ENST00000494503 EPHA1P21709 976 aa8.27□□□□□ -1.09
UBR4-216ENST00000494503 DRD4P21917 467 aa8.27□□□□□ -1.09
UBR4-216ENST00000494503 PRKAR1BP31321 381 aa8.27□□□□□ -1.09
UBR4-216ENST00000494503 GLRXP35754 106 aa8.27□□□□□ -1.09
UBR4-216ENST00000494503 RAD52P43351 418 aa8.27□□□□□ -1.09
UBR4-216ENST00000494503 MAGEB1P43366 347 aa8.27□□□□□ -1.09
UBR4-216ENST00000494503 CCL8P80075 99 aa8.27□□□□□ -1.09
UBR4-216ENST00000494503 CDK6Q00534 326 aa8.27□□□□□ -1.09
UBR4-216ENST00000494503 GLO1Q04760 184 aa8.27□□□□□ -1.09
UBR4-216ENST00000494503 RBBP4Q09028 425 aa8.27□□□□□ -1.09
UBR4-216ENST00000494503 FADDQ13158 208 aa8.27□□□□□ -1.09
UBR4-216ENST00000494503 OR1Q1Q15612 314 aa8.27□□□□□ -1.09
UBR4-216ENST00000494503 MSMPQ1L6U9 139 aa8.27□□□□□ -1.09
UBR4-216ENST00000494503 MS4A18Q3C1V0 323 aa8.27□□□□□ -1.09
UBR4-216ENST00000494503 C6orf89Q6UWU4 347 aa8.27□□□□□ -1.09
UBR4-216ENST00000494503 RANBP3LQ86VV4 465 aaPredicted RBP8.27□□□□□ -1.09
UBR4-216ENST00000494503 SCAIQ8N9R8 606 aa8.27□□□□□ -1.09
UBR4-216ENST00000494503 YIPF5Q969M3 257 aa8.27□□□□□ -1.09
UBR4-216ENST00000494503 MOGAT1Q96PD6 335 aa8.27□□□□□ -1.09
UBR4-216ENST00000494503 OR52B2Q96RD2 323 aa8.27□□□□□ -1.09
UBR4-216ENST00000494503 C12orf10Q9HB07 376 aa8.27□□□□□ -1.09
UBR4-216ENST00000494503 DECR2Q9NUI1 292 aa8.27□□□□□ -1.09
UBR4-216ENST00000494503 NKIRAS1Q9NYS0 192 aa8.27□□□□□ -1.09
UBR4-216ENST00000494503 TAAR3PQ9P1P4 343 aa8.27□□□□□ -1.09
UBR4-216ENST00000494503 TESQ9UGI8 421 aaKnown RBP8.27□□□□□ -1.09
UBR4-216ENST00000494503 SLC7A8Q9UHI5 535 aa8.27□□□□□ -1.09
UBR4-216ENST00000494503 GPR160Q9UJ42 338 aa8.27□□□□□ -1.09
UBR4-216ENST00000494503 PRDM4Q9UKN5 801 aa8.27□□□□□ -1.09
UBR4-216ENST00000494503 A0A0A6YYJ9 748 aa8.26□□□□□ -1.09
UBR4-216ENST00000494503 TRAV20A0A0B4J274 112 aa8.26□□□□□ -1.09
UBR4-216ENST00000494503 ISPDA4D126 451 aa8.26□□□□□ -1.09
UBR4-216ENST00000494503 RNF13O43567 381 aa8.26□□□□□ -1.09
UBR4-216ENST00000494503 TPST1O60507 370 aa8.26□□□□□ -1.09
UBR4-216ENST00000494503 NCR1O76036 304 aa8.26□□□□□ -1.09
UBR4-216ENST00000494503 MPZL1O95297 269 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms