RNA–Protein interactions for RNA: ENST00000494486.1

TRIM59-206, Transcript of tripartite motif containing 59, humanhuman

TSL 3

Gene TRIM59, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-206ENST00000494486 PIWIL3Q7Z3Z3 882 aaKnown RBP9.04□□□□□ -0.96
TRIM59-206ENST00000494486 FBXO36Q8NEA4 188 aa9.04□□□□□ -0.96
TRIM59-206ENST00000494486 PIK3C3Q8NEB9 887 aa9.04□□□□□ -0.96
TRIM59-206ENST00000494486 OR4C13Q8NGP0 309 aa9.04□□□□□ -0.96
TRIM59-206ENST00000494486 OR5R1Q8NH85 324 aa9.04□□□□□ -0.96
TRIM59-206ENST00000494486 GEMIN6Q8WXD5 167 aaKnown RBP9.04□□□□□ -0.96
TRIM59-206ENST00000494486 DDB2Q92466 427 aa9.04□□□□□ -0.96
TRIM59-206ENST00000494486 NEIL1Q96FI4 390 aaPredicted RBP9.04□□□□□ -0.96
TRIM59-206ENST00000494486 TAPBPLQ9BX59 468 aa9.04□□□□□ -0.96
TRIM59-206ENST00000494486 ZMAT5Q9UDW3 170 aaKnown RBP9.04□□□□□ -0.96
TRIM59-206ENST00000494486 OSGIN1Q9UJX0 560 aa9.04□□□□□ -0.96
TRIM59-206ENST00000494486 TMCO1Q9UM00 188 aa9.04□□□□□ -0.96
TRIM59-206ENST00000494486 CAB39Q9Y376 341 aaPredicted RBP9.04□□□□□ -0.96
TRIM59-206ENST00000494486 STAB2Q8WWQ8 2551 aa9.04□□□□□ -0.96
TRIM59-206ENST00000494486 ZNF879B4DU55 563 aa9.03□□□□□ -0.96
TRIM59-206ENST00000494486 ENSAO43768 121 aaKnown RBP9.03□□□□□ -0.96
TRIM59-206ENST00000494486 SCN2BO60939 215 aa9.03□□□□□ -0.96
TRIM59-206ENST00000494486 OR4F21O95013 312 aa9.03□□□□□ -0.96
TRIM59-206ENST00000494486 MFN2O95140 757 aa9.03□□□□□ -0.96
TRIM59-206ENST00000494486 LIPFP07098 398 aa9.03□□□□□ -0.96
TRIM59-206ENST00000494486 KRT16P08779 473 aa9.03□□□□□ -0.96
TRIM59-206ENST00000494486 FAHP16930 419 aa9.03□□□□□ -0.96
TRIM59-206ENST00000494486 PGM1P36871 562 aa9.03□□□□□ -0.96
TRIM59-206ENST00000494486 IDH2P48735 452 aaKnown RBP9.03□□□□□ -0.96
TRIM59-206ENST00000494486 ARL4CP56559 192 aa9.03□□□□□ -0.96
TRIM59-206ENST00000494486 PPP1R7Q15435 360 aa9.03□□□□□ -0.96
TRIM59-206ENST00000494486 GRTP1Q5TC63 336 aa9.03□□□□□ -0.96
TRIM59-206ENST00000494486 SLC27A4Q6P1M0 643 aa9.03□□□□□ -0.96
TRIM59-206ENST00000494486 EMBQ6PCB8 327 aa9.03□□□□□ -0.96
TRIM59-206ENST00000494486 ZNF584Q8IVC4 421 aa9.03□□□□□ -0.96
TRIM59-206ENST00000494486 FAM71CQ8NEG0 241 aa9.03□□□□□ -0.96
TRIM59-206ENST00000494486 SLC30A7Q8NEW0 376 aa9.03□□□□□ -0.96
TRIM59-206ENST00000494486 CIDECQ96AQ7 238 aaPredicted RBP9.03□□□□□ -0.96
TRIM59-206ENST00000494486 FAM120BQ96EK7 910 aaKnown RBP9.03□□□□□ -0.96
TRIM59-206ENST00000494486 ZNF764Q96H86 408 aaPredicted RBP9.03□□□□□ -0.96
TRIM59-206ENST00000494486 GPR78Q96P69 363 aa9.03□□□□□ -0.96
TRIM59-206ENST00000494486 SDF2Q99470 211 aa9.03□□□□□ -0.96
TRIM59-206ENST00000494486 ASCL2Q99929 193 aa9.03□□□□□ -0.96
TRIM59-206ENST00000494486 CITED2Q99967 270 aaPredicted RBP9.03□□□□□ -0.96
TRIM59-206ENST00000494486 CHID1Q9BWS9 393 aa9.03□□□□□ -0.96
TRIM59-206ENST00000494486 SLC19A3Q9BZV2 496 aa9.03□□□□□ -0.96
TRIM59-206ENST00000494486 OR51B6Q9H340 312 aa9.03□□□□□ -0.96
TRIM59-206ENST00000494486 CDH20Q9HBT6 801 aa9.03□□□□□ -0.96
TRIM59-206ENST00000494486 ZCCHC3Q9NUD5 404 aaKnown RBP9.03□□□□□ -0.96
TRIM59-206ENST00000494486 ZNF224Q9NZL3 707 aa9.03□□□□□ -0.96
TRIM59-206ENST00000494486 ZNRD1Q9P1U0 126 aa9.03□□□□□ -0.96
TRIM59-206ENST00000494486 CGGBP1Q9UFW8 167 aaPredicted RBP9.03□□□□□ -0.96
TRIM59-206ENST00000494486 KCNE5Q9UJ90 142 aa9.03□□□□□ -0.96
TRIM59-206ENST00000494486 ZNF225Q9UK10 706 aa9.03□□□□□ -0.96
TRIM59-206ENST00000494486 FAF1Q9UNN5 650 aaPredicted RBP9.03□□□□□ -0.96
TRIM59-206ENST00000494486 SLC35A3Q9Y2D2 325 aa9.03□□□□□ -0.96
TRIM59-206ENST00000494486 KCNE3Q9Y6H6 103 aa9.03□□□□□ -0.96
TRIM59-206ENST00000494486 ZSCAN5BA6NJL1 495 aa9.02□□□□□ -0.97
TRIM59-206ENST00000494486 ZNF500O60304 480 aaPredicted RBP9.02□□□□□ -0.97
TRIM59-206ENST00000494486 UGT2B17O75795 530 aa9.02□□□□□ -0.97
TRIM59-206ENST00000494486 KLHL2O95198 593 aa9.02□□□□□ -0.97
TRIM59-206ENST00000494486 SNAP29O95721 258 aa9.02□□□□□ -0.97
TRIM59-206ENST00000494486 FBP1P09467 338 aa9.02□□□□□ -0.97
TRIM59-206ENST00000494486 MMP9P14780 707 aa9.02□□□□□ -0.97
TRIM59-206ENST00000494486 ZNF43P17038 809 aa9.02□□□□□ -0.97
TRIM59-206ENST00000494486 TNFRSF1AP19438 455 aa9.02□□□□□ -0.97
TRIM59-206ENST00000494486 FRKP42685 505 aaPredicted RBP9.02□□□□□ -0.97
TRIM59-206ENST00000494486 CDH13P55290 713 aa9.02□□□□□ -0.97
TRIM59-206ENST00000494486 TNFAIP6P98066 277 aaPredicted RBP9.02□□□□□ -0.97
TRIM59-206ENST00000494486 COX10Q12887 443 aa9.02□□□□□ -0.97
TRIM59-206ENST00000494486 GPR68Q15743 365 aa9.02□□□□□ -0.97
TRIM59-206ENST00000494486 SPRNQ5BIV9 151 aa9.02□□□□□ -0.97
TRIM59-206ENST00000494486 ZMAT1Q5H9K5 638 aa9.02□□□□□ -0.97
TRIM59-206ENST00000494486 TCTEX1D4Q5JR98 221 aa9.02□□□□□ -0.97
TRIM59-206ENST00000494486 SPDYAQ5MJ70 313 aa9.02□□□□□ -0.97
TRIM59-206ENST00000494486 AP1ARQ63HQ0 302 aa9.02□□□□□ -0.97
TRIM59-206ENST00000494486 CAVIN1Q6NZI2 390 aaKnown RBP9.02□□□□□ -0.97
TRIM59-206ENST00000494486 NLRC3Q7RTR2 1065 aa9.02□□□□□ -0.97
TRIM59-206ENST00000494486 PAQR4Q8N4S7 273 aaPredicted RBP9.02□□□□□ -0.97
TRIM59-206ENST00000494486 ICA1LQ8NDH6 482 aa9.02□□□□□ -0.97
TRIM59-206ENST00000494486 OR8B3Q8NGG8 313 aa9.02□□□□□ -0.97
TRIM59-206ENST00000494486 FAM76AQ8TAV0 307 aa9.02□□□□□ -0.97
TRIM59-206ENST00000494486 OIT3Q8WWZ8 545 aa9.02□□□□□ -0.97
TRIM59-206ENST00000494486 SAMD8Q96LT4 415 aa9.02□□□□□ -0.97
TRIM59-206ENST00000494486 OR8B2Q96RD0 313 aa9.02□□□□□ -0.97
TRIM59-206ENST00000494486 SIGLEC11Q96RL6 698 aa9.02□□□□□ -0.97
TRIM59-206ENST00000494486 C1orf198Q9H425 327 aa9.02□□□□□ -0.97
TRIM59-206ENST00000494486 RANBP3Q9H6Z4 567 aaPredicted RBP9.02□□□□□ -0.97
TRIM59-206ENST00000494486 EXOSC3Q9NQT5 275 aaKnown RBP9.02□□□□□ -0.97
TRIM59-206ENST00000494486 ADPRHL2Q9NX46 363 aa9.02□□□□□ -0.97
TRIM59-206ENST00000494486 NOP53Q9NZM5 478 aaKnown RBP9.02□□□□□ -0.97
TRIM59-206ENST00000494486 POFUT2Q9Y2G5 429 aa9.02□□□□□ -0.97
TRIM59-206ENST00000494486 RPS17P08708 135 aaKnown RBP9.01□□□□□ -0.97
TRIM59-206ENST00000494486 SLC6A2P23975 617 aa9.01□□□□□ -0.97
TRIM59-206ENST00000494486 TACR3P29371 465 aa9.01□□□□□ -0.97
TRIM59-206ENST00000494486 CXCR5P32302 372 aa9.01□□□□□ -0.97
TRIM59-206ENST00000494486 PITPNBP48739 271 aa9.01□□□□□ -0.97
TRIM59-206ENST00000494486 PDIA2Q13087 525 aaKnown RBP9.01□□□□□ -0.97
TRIM59-206ENST00000494486 HNRNPA0Q13151 305 aaKnown RBP9.01□□□□□ -0.97
TRIM59-206ENST00000494486 RASA2Q15283 850 aa9.01□□□□□ -0.97
TRIM59-206ENST00000494486 ZNF718Q3SXZ3 478 aa9.01□□□□□ -0.97
TRIM59-206ENST00000494486 FAM219BQ5XKK7 198 aa9.01□□□□□ -0.97
TRIM59-206ENST00000494486 RPS27LQ71UM5 84 aaKnown RBP9.01□□□□□ -0.97
TRIM59-206ENST00000494486 COMTD1Q86VU5 262 aa9.01□□□□□ -0.97
TRIM59-206ENST00000494486 SNX32Q86XE0 403 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms