RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 EIF1BO60739 113 aaKnown RBP6.08□□□□□ -1.44
MSH5-217ENST00000494458 VAMP5O95183 116 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 HRGP04196 525 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 RFPL3SP0C7P2 107 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 HLA-DOBP13765 273 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 ZNF182P17025 639 aaPredicted RBP6.08□□□□□ -1.44
MSH5-217ENST00000494458 GADD45AP24522 165 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 CD79BP40259 229 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 NOVA1P51513 510 aaKnown RBP6.08□□□□□ -1.44
MSH5-217ENST00000494458 BLVRAP53004 296 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 SUCLG1P53597 346 aaKnown RBP6.08□□□□□ -1.44
MSH5-217ENST00000494458 RRADP55042 308 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 CLDN15P56746 228 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 RAP1BP61224 184 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 RAP1AP62834 184 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 SLC35A1P78382 337 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 NHLH1Q02575 133 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 RUNX1T1Q06455 604 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 MFAP5Q13361 173 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 KRR1Q13601 381 aaKnown RBP6.08□□□□□ -1.44
MSH5-217ENST00000494458 C1DQ13901 141 aaKnown RBP6.08□□□□□ -1.44
MSH5-217ENST00000494458 MED22Q15528 200 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 TGIF1Q15583 401 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 OR7A5Q15622 319 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 TSTQ16762 297 aaKnown RBP6.08□□□□□ -1.44
MSH5-217ENST00000494458 CCDC58Q4VC31 144 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 OR2G6Q5TZ20 316 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 LCN1P1Q5VSP4 162 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 ABHD17BQ5VST6 288 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 DMKNQ6E0U4 476 aaPredicted RBP6.08□□□□□ -1.44
MSH5-217ENST00000494458 LEG1Q6P5S2 330 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 B3GLCTQ6Y288 498 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 TMPRSS11AQ6ZMR5 421 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 SLC16A9Q7RTY1 509 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 CDC20BQ86Y33 519 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 WDFY1Q8IWB7 410 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 GALNT16Q8N428 558 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 KLHL36Q8N4N3 616 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 IL22RA1Q8N6P7 574 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 C10orf53Q8N6V4 93 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 TEX19Q8NA77 164 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 ZFP62Q8NB50 900 aaPredicted RBP6.08□□□□□ -1.44
MSH5-217ENST00000494458 FAM98AQ8NCA5 519 aaKnown RBP6.08□□□□□ -1.44
MSH5-217ENST00000494458 LSM14AQ8ND56 463 aaKnown RBP6.08□□□□□ -1.44
MSH5-217ENST00000494458 ZNF248Q8NDW4 579 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 OR51G2Q8NGK0 314 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 OR2T4Q8NH00 348 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 OR6X1Q8NH79 312 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 HAVCR2Q8TDQ0 301 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 KCNE4Q8WWG9 221 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 GATAD2BQ8WXI9 593 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 RPL3LQ92901 407 aaKnown RBP6.08□□□□□ -1.44
MSH5-217ENST00000494458 KIAA1143Q96AT1 154 aaPredicted RBP6.08□□□□□ -1.44
MSH5-217ENST00000494458 SLC25A36Q96CQ1 311 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 SCMH1Q96GD3 660 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 OXGR1Q96P68 337 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 SIGLEC12Q96PQ1 595 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 CNN2Q99439 309 aaKnown RBP6.08□□□□□ -1.44
MSH5-217ENST00000494458 FAM173AQ9BQD7 235 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 MED18Q9BUE0 208 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 SF3B5Q9BWJ5 86 aaKnown RBP6.08□□□□□ -1.44
MSH5-217ENST00000494458 SLIRPQ9GZT3 109 aaKnown RBP6.08□□□□□ -1.44
MSH5-217ENST00000494458 OR51E2Q9H255 320 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 OR51V1Q9H2C8 321 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 KLHL1Q9NR64 748 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 CHCHD3Q9NX63 227 aaKnown RBP6.08□□□□□ -1.44
MSH5-217ENST00000494458 QPCTLQ9NXS2 382 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 LRFN1Q9P244 771 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 KLHL9Q9P2J3 617 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 STUB1Q9UNE7 303 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 B9D1Q9UPM9 204 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 SIRT4Q9Y6E7 314 aaPredicted RBP6.08□□□□□ -1.44
MSH5-217ENST00000494458 PMF1-BGLAPU3KQ54 211 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 DMXL1Q9Y485 3027 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 FAM186AA6NE01 2351 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 A0A0J9YW62 118 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 A0A1W2PRG6 482 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 CCDC160A6NGH7 325 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 HSPB2A8KAH6 182 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 ZNF814B7Z6K7 855 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 FAM47E-STBD1D6RA91 191 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 ZNF670-ZNF695F2Z2N8 137 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 RNF13O43567 381 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 AKAP8O43823 692 aaKnown RBP6.07□□□□□ -1.44
MSH5-217ENST00000494458 GMFGO60234 142 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 NME2P1O60361 137 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 SULT1C4O75897 302 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 ABHD16AO95870 558 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 WDPCPO95876 746 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 RENP00797 406 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 MT-ND5P03915 603 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 GYPBP06028 91 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 WT1P19544 449 aaPredicted RBP6.07□□□□□ -1.44
MSH5-217ENST00000494458 ALOX5APP20292 161 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 NME2P22392 152 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 PAX7P23759 505 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 PSMA1P25786 263 aaKnown RBP6.07□□□□□ -1.44
MSH5-217ENST00000494458 CRABP1P29762 137 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 GABRA5P31644 462 aa6.07□□□□□ -1.44
MSH5-217ENST00000494458 ACVR1BP36896 505 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms