RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 SAC3D1A6NKF1 404 aa15.77■□□□□ 0.12
PDLIM7-208ENST00000493815 M0R3G1 203 aa15.77■□□□□ 0.12
PDLIM7-208ENST00000493815 SLC43A1O75387 559 aa15.77■□□□□ 0.12
PDLIM7-208ENST00000493815 LYZL6O75951 148 aa15.77■□□□□ 0.12
PDLIM7-208ENST00000493815 KRT33AO76009 404 aa15.77■□□□□ 0.12
PDLIM7-208ENST00000493815 NDUFB2O95178 105 aa15.77■□□□□ 0.12
PDLIM7-208ENST00000493815 CDH2P19022 906 aaPredicted RBP15.77■□□□□ 0.12
PDLIM7-208ENST00000493815 IGHV1-2P23083 117 aa15.77■□□□□ 0.12
PDLIM7-208ENST00000493815 CD79BP40259 229 aa15.77■□□□□ 0.12
PDLIM7-208ENST00000493815 ARHGDIAP52565 204 aa15.77■□□□□ 0.12
PDLIM7-208ENST00000493815 GK3PQ14409 553 aa15.77■□□□□ 0.12
PDLIM7-208ENST00000493815 ANKDD1AQ495B1 522 aa15.77■□□□□ 0.12
PDLIM7-208ENST00000493815 CLEC12AQ5QGZ9 265 aa15.77■□□□□ 0.12
PDLIM7-208ENST00000493815 STAC2Q6ZMT1 411 aa15.77■□□□□ 0.12
PDLIM7-208ENST00000493815 ZNF620Q6ZNG0 422 aa15.77■□□□□ 0.12
PDLIM7-208ENST00000493815 CLDN22Q8N7P3 220 aa15.77■□□□□ 0.12
PDLIM7-208ENST00000493815 SYT14Q8NB59 555 aa15.77■□□□□ 0.12
PDLIM7-208ENST00000493815 OR5K1Q8NHB7 308 aa15.77■□□□□ 0.12
PDLIM7-208ENST00000493815 ASB10Q8WXI3 467 aa15.77■□□□□ 0.12
PDLIM7-208ENST00000493815 STMN2Q93045 179 aa15.77■□□□□ 0.12
PDLIM7-208ENST00000493815 CENPNQ96H22 339 aaPredicted RBP15.77■□□□□ 0.12
PDLIM7-208ENST00000493815 PLA2G12AQ9BZM1 189 aa15.77■□□□□ 0.12
PDLIM7-208ENST00000493815 TXNIPQ9H3M7 391 aa15.77■□□□□ 0.12
PDLIM7-208ENST00000493815 ASB6Q9NWX5 421 aa15.77■□□□□ 0.12
PDLIM7-208ENST00000493815 MALT1Q9UDY8 824 aa15.77■□□□□ 0.12
PDLIM7-208ENST00000493815 OAZ3Q9UMX2 235 aa15.77■□□□□ 0.12
PDLIM7-208ENST00000493815 KLF2Q9Y5W3 355 aaPredicted RBP15.77■□□□□ 0.12
PDLIM7-208ENST00000493815 G3V2T6 193 aa15.76■□□□□ 0.11
PDLIM7-208ENST00000493815 CCKARP32238 428 aa15.76■□□□□ 0.11
PDLIM7-208ENST00000493815 DAP3P51398 398 aaKnown RBP15.76■□□□□ 0.11
PDLIM7-208ENST00000493815 RFX4Q33E94 735 aa15.76■□□□□ 0.11
PDLIM7-208ENST00000493815 ARMC4Q5T2S8 1044 aa15.76■□□□□ 0.11
PDLIM7-208ENST00000493815 HIST2H2BCQ6DN03 193 aa15.76■□□□□ 0.11
PDLIM7-208ENST00000493815 ZNF771Q7L3S4 317 aaPredicted RBP15.76■□□□□ 0.11
PDLIM7-208ENST00000493815 C10orf67Q8IYJ2 551 aa15.76■□□□□ 0.11
PDLIM7-208ENST00000493815 ATG16L2Q8NAA4 619 aa15.76■□□□□ 0.11
PDLIM7-208ENST00000493815 OR6X1Q8NH79 312 aa15.76■□□□□ 0.11
PDLIM7-208ENST00000493815 ZNF837Q96EG3 531 aaPredicted RBP15.76■□□□□ 0.11
PDLIM7-208ENST00000493815 ARRDC5A6NEK1 342 aa15.76■□□□□ 0.11
PDLIM7-208ENST00000493815 PDLIM1O00151 329 aa15.76■□□□□ 0.11
PDLIM7-208ENST00000493815 AKAP8O43823 692 aaKnown RBP15.76■□□□□ 0.11
PDLIM7-208ENST00000493815 PPP1R3DO95685 299 aa15.76■□□□□ 0.11
PDLIM7-208ENST00000493815 BAG2O95816 211 aa15.76■□□□□ 0.11
PDLIM7-208ENST00000493815 CD14P08571 375 aa15.76■□□□□ 0.11
PDLIM7-208ENST00000493815 UGT2B10P36537 528 aa15.76■□□□□ 0.11
PDLIM7-208ENST00000493815 RPL27P61353 136 aaKnown RBP15.76■□□□□ 0.11
PDLIM7-208ENST00000493815 KLHL17Q6TDP4 642 aa15.76■□□□□ 0.11
PDLIM7-208ENST00000493815 C20orf196Q8IYI0 205 aa15.76■□□□□ 0.11
PDLIM7-208ENST00000493815 OR8D4Q8NGM9 314 aa15.76■□□□□ 0.11
PDLIM7-208ENST00000493815 OR6N1Q8NGY5 312 aa15.76■□□□□ 0.11
PDLIM7-208ENST00000493815 ZNF566Q969W8 418 aa15.76■□□□□ 0.11
PDLIM7-208ENST00000493815 SLC25A44Q96H78 314 aaPredicted RBP15.76■□□□□ 0.11
PDLIM7-208ENST00000493815 Q96M85 177 aa15.76■□□□□ 0.11
PDLIM7-208ENST00000493815 SMURF2Q9HAU4 748 aa15.76■□□□□ 0.11
PDLIM7-208ENST00000493815 ELOVL5Q9NYP7 299 aa15.76■□□□□ 0.11
PDLIM7-208ENST00000493815 PLEKHB1Q9UF11 243 aaPredicted RBP15.76■□□□□ 0.11
PDLIM7-208ENST00000493815 IER3IP1Q9Y5U9 82 aa15.76■□□□□ 0.11
PDLIM7-208ENST00000493815 TEX13CA0A0J9YWL9 993 aa15.75■□□□□ 0.11
PDLIM7-208ENST00000493815 H7C1C5 153 aa15.75■□□□□ 0.11
PDLIM7-208ENST00000493815 TRMUO75648 421 aaKnown RBP15.75■□□□□ 0.11
PDLIM7-208ENST00000493815 TP53P04637 393 aaPredicted RBP15.75■□□□□ 0.11
PDLIM7-208ENST00000493815 ITGA5P08648 1049 aa15.75■□□□□ 0.11
PDLIM7-208ENST00000493815 ACVR1BP36896 505 aa15.75■□□□□ 0.11
PDLIM7-208ENST00000493815 DAPP51397 102 aa15.75■□□□□ 0.11
PDLIM7-208ENST00000493815 LCN6P62502 163 aa15.75■□□□□ 0.11
PDLIM7-208ENST00000493815 MYBPC1Q00872 1141 aa15.75■□□□□ 0.11
PDLIM7-208ENST00000493815 RASSF6Q6ZTQ3 369 aa15.75■□□□□ 0.11
PDLIM7-208ENST00000493815 FAM122BQ7Z309 247 aa15.75■□□□□ 0.11
PDLIM7-208ENST00000493815 ZDHHC13Q8IUH4 622 aa15.75■□□□□ 0.11
PDLIM7-208ENST00000493815 GPR137CQ8N3F9 429 aa15.75■□□□□ 0.11
PDLIM7-208ENST00000493815 POMGNT2Q8NAT1 580 aa15.75■□□□□ 0.11
PDLIM7-208ENST00000493815 LINC01560Q8TB33 94 aa15.75■□□□□ 0.11
PDLIM7-208ENST00000493815 HDAC2Q92769 488 aaKnown RBP15.75■□□□□ 0.11
PDLIM7-208ENST00000493815 RASD2Q96D21 266 aa15.75■□□□□ 0.11
PDLIM7-208ENST00000493815 NRBF2Q96F24 287 aa15.75■□□□□ 0.11
PDLIM7-208ENST00000493815 LRRC46Q96FV0 321 aa15.75■□□□□ 0.11
PDLIM7-208ENST00000493815 ADAD1Q96M93 576 aaKnown RBP15.75■□□□□ 0.11
PDLIM7-208ENST00000493815 IFT27Q9BW83 186 aa15.75■□□□□ 0.11
PDLIM7-208ENST00000493815 CRLF2Q9HC73 371 aa15.75■□□□□ 0.11
PDLIM7-208ENST00000493815 NRIP3Q9NQ35 241 aa15.75■□□□□ 0.11
PDLIM7-208ENST00000493815 KIF17Q9P2E2 1029 aa15.75■□□□□ 0.11
PDLIM7-208ENST00000493815 GRHPRQ9UBQ7 328 aa15.75■□□□□ 0.11
PDLIM7-208ENST00000493815 FOXD3Q9UJU5 478 aaPredicted RBP15.75■□□□□ 0.11
PDLIM7-208ENST00000493815 CDH10Q9Y6N8 788 aa15.75■□□□□ 0.11
PDLIM7-208ENST00000493815 HCFC1P51610 2035 aa15.75■□□□□ 0.11
PDLIM7-208ENST00000493815 C16orf97H3BN30 126 aa15.74■□□□□ 0.11
PDLIM7-208ENST00000493815 IGHG1P01857 330 aa15.74■□□□□ 0.11
PDLIM7-208ENST00000493815 IGHMP01871 453 aa15.74■□□□□ 0.11
PDLIM7-208ENST00000493815 PGA4P0DJD7 388 aa15.74■□□□□ 0.11
PDLIM7-208ENST00000493815 PGA3P0DJD8 388 aa15.74■□□□□ 0.11
PDLIM7-208ENST00000493815 ACADSP16219 412 aa15.74■□□□□ 0.11
PDLIM7-208ENST00000493815 GSTM3P21266 225 aa15.74■□□□□ 0.11
PDLIM7-208ENST00000493815 CSNK1A1P48729 337 aa15.74■□□□□ 0.11
PDLIM7-208ENST00000493815 ROR2Q01974 943 aaKnown RBP15.74■□□□□ 0.11
PDLIM7-208ENST00000493815 ITGADQ13349 1161 aa15.74■□□□□ 0.11
PDLIM7-208ENST00000493815 TAF11Q15544 211 aa15.74■□□□□ 0.11
PDLIM7-208ENST00000493815 SLC36A3Q495N2 470 aa15.74■□□□□ 0.11
PDLIM7-208ENST00000493815 SFRP5Q5T4F7 317 aa15.74■□□□□ 0.11
PDLIM7-208ENST00000493815 DPY19L2P2Q6ZN68 376 aa15.74■□□□□ 0.11
PDLIM7-208ENST00000493815 C22orf34Q6ZV56 151 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms