RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 RPS5P46782 204 aaKnown RBP10.82□□□□□ -0.68
UPF3A-210ENST00000493727 GFRA1P56159 465 aa10.82□□□□□ -0.68
UPF3A-210ENST00000493727 PRKCDQ05655 676 aa10.82□□□□□ -0.68
UPF3A-210ENST00000493727 DAG1Q14118 895 aa10.82□□□□□ -0.68
UPF3A-210ENST00000493727 PDSS1Q5T2R2 415 aa10.82□□□□□ -0.68
UPF3A-210ENST00000493727 OGFRL1Q5TC84 451 aaPredicted RBP10.82□□□□□ -0.68
UPF3A-210ENST00000493727 UBQLNLQ8IYU4 475 aa10.82□□□□□ -0.68
UPF3A-210ENST00000493727 GALNT4Q8N4A0 578 aa10.82□□□□□ -0.68
UPF3A-210ENST00000493727 MAGEE2Q8TD90 523 aaPredicted RBP10.82□□□□□ -0.68
UPF3A-210ENST00000493727 ABTB1Q969K4 478 aaPredicted RBP10.82□□□□□ -0.68
UPF3A-210ENST00000493727 SLC25A36Q96CQ1 311 aa10.82□□□□□ -0.68
UPF3A-210ENST00000493727 BPIFA2Q96DR5 249 aa10.82□□□□□ -0.68
UPF3A-210ENST00000493727 KTI12Q96EK9 354 aaPredicted RBP10.82□□□□□ -0.68
UPF3A-210ENST00000493727 ZFP3Q96NJ6 502 aa10.82□□□□□ -0.68
UPF3A-210ENST00000493727 FEVQ99581 238 aa10.82□□□□□ -0.68
UPF3A-210ENST00000493727 OSBPL10Q9BXB5 764 aa10.82□□□□□ -0.68
UPF3A-210ENST00000493727 COQ10BQ9H8M1 238 aa10.82□□□□□ -0.68
UPF3A-210ENST00000493727 CALHM2Q9HA72 323 aa10.82□□□□□ -0.68
UPF3A-210ENST00000493727 C8orf4Q9NR00 106 aa10.82□□□□□ -0.68
UPF3A-210ENST00000493727 RASSF1Q9NS23 344 aa10.82□□□□□ -0.68
UPF3A-210ENST00000493727 C20orf141Q9NUB4 165 aa10.82□□□□□ -0.68
UPF3A-210ENST00000493727 KIAA1549Q9HCM3 1950 aa10.81□□□□□ -0.68
UPF3A-210ENST00000493727 HTR3EA5X5Y0 456 aa10.81□□□□□ -0.68
UPF3A-210ENST00000493727 MBD3L4A6NDZ8 208 aaPredicted RBP10.81□□□□□ -0.68
UPF3A-210ENST00000493727 MBD3L3A6NE82 208 aaPredicted RBP10.81□□□□□ -0.68
UPF3A-210ENST00000493727 MBD3L5A6NJ08 208 aaPredicted RBP10.81□□□□□ -0.68
UPF3A-210ENST00000493727 A6NNC1 897 aa10.81□□□□□ -0.68
UPF3A-210ENST00000493727 SOCS2O14508 198 aa10.81□□□□□ -0.68
UPF3A-210ENST00000493727 TNFSF11O14788 317 aa10.81□□□□□ -0.68
UPF3A-210ENST00000493727 OR2T1O43869 369 aa10.81□□□□□ -0.68
UPF3A-210ENST00000493727 EFNA2O43921 213 aa10.81□□□□□ -0.68
UPF3A-210ENST00000493727 OR7A10O76100 309 aa10.81□□□□□ -0.68
UPF3A-210ENST00000493727 CH25HO95992 272 aa10.81□□□□□ -0.68
UPF3A-210ENST00000493727 GASTP01350 101 aa10.81□□□□□ -0.68
UPF3A-210ENST00000493727 HIST1H2ABP04908 130 aa10.81□□□□□ -0.68
UPF3A-210ENST00000493727 BMP7P18075 431 aa10.81□□□□□ -0.68
UPF3A-210ENST00000493727 CDH2P19022 906 aaPredicted RBP10.81□□□□□ -0.68
UPF3A-210ENST00000493727 GSTM3P21266 225 aa10.81□□□□□ -0.68
UPF3A-210ENST00000493727 IGFBP5P24593 272 aa10.81□□□□□ -0.68
UPF3A-210ENST00000493727 DNASE1P24855 282 aa10.81□□□□□ -0.68
UPF3A-210ENST00000493727 CTSSP25774 331 aa10.81□□□□□ -0.68
UPF3A-210ENST00000493727 OMPP47874 163 aa10.81□□□□□ -0.68
UPF3A-210ENST00000493727 PTDSS1P48651 473 aaKnown RBP10.81□□□□□ -0.68
UPF3A-210ENST00000493727 CLK1P49759 484 aaKnown RBP10.81□□□□□ -0.68
UPF3A-210ENST00000493727 ALDH3A2P51648 485 aa10.81□□□□□ -0.68
UPF3A-210ENST00000493727 CTBP2P56545 445 aa10.81□□□□□ -0.68
UPF3A-210ENST00000493727 OR2B6P58173 313 aa10.81□□□□□ -0.68
UPF3A-210ENST00000493727 SORDQ00796 357 aa10.81□□□□□ -0.68
UPF3A-210ENST00000493727 SRYQ05066 204 aa10.81□□□□□ -0.68
UPF3A-210ENST00000493727 EGR4Q05215 589 aa10.81□□□□□ -0.68
UPF3A-210ENST00000493727 TAF11Q15544 211 aa10.81□□□□□ -0.68
UPF3A-210ENST00000493727 OR7A5Q15622 319 aa10.81□□□□□ -0.68
UPF3A-210ENST00000493727 FAM69AQ5T7M9 428 aa10.81□□□□□ -0.68
UPF3A-210ENST00000493727 PPP4R4Q6NUP7 873 aa10.81□□□□□ -0.68
UPF3A-210ENST00000493727 HIST3H2AQ7L7L0 130 aa10.81□□□□□ -0.68
UPF3A-210ENST00000493727 ZER1Q7Z7L7 766 aa10.81□□□□□ -0.68
UPF3A-210ENST00000493727 NAXEQ8NCW5 288 aa10.81□□□□□ -0.68
UPF3A-210ENST00000493727 MBD3L2Q8NHZ7 208 aaPredicted RBP10.81□□□□□ -0.68
UPF3A-210ENST00000493727 ZPLD1Q8TCW7 415 aa10.81□□□□□ -0.68
UPF3A-210ENST00000493727 DNAJC9Q8WXX5 260 aa10.81□□□□□ -0.68
UPF3A-210ENST00000493727 HIST1H2ACQ93077 130 aa10.81□□□□□ -0.68
UPF3A-210ENST00000493727 TAAR8Q969N4 342 aa10.81□□□□□ -0.68
UPF3A-210ENST00000493727 WDYHV1Q96HA8 205 aa10.81□□□□□ -0.68
UPF3A-210ENST00000493727 ARL5BQ96KC2 179 aa10.81□□□□□ -0.68
UPF3A-210ENST00000493727 TRIB1Q96RU8 372 aa10.81□□□□□ -0.68
UPF3A-210ENST00000493727 PSD2Q9BQI7 771 aa10.81□□□□□ -0.68
UPF3A-210ENST00000493727 ASPNQ9BXN1 380 aa10.81□□□□□ -0.68
UPF3A-210ENST00000493727 POTEKPQ9BYX7 375 aa10.81□□□□□ -0.68
UPF3A-210ENST00000493727 SMURF2Q9HAU4 748 aa10.81□□□□□ -0.68
UPF3A-210ENST00000493727 MEPEQ9NQ76 525 aaPredicted RBP10.81□□□□□ -0.68
UPF3A-210ENST00000493727 NANSQ9NR45 359 aa10.81□□□□□ -0.68
UPF3A-210ENST00000493727 PAPOLBQ9NRJ5 636 aaKnown RBP10.81□□□□□ -0.68
UPF3A-210ENST00000493727 KRT84Q9NSB2 600 aa10.81□□□□□ -0.68
UPF3A-210ENST00000493727 POFUT2Q9Y2G5 429 aa10.81□□□□□ -0.68
UPF3A-210ENST00000493727 HDGFL3Q9Y3E1 203 aa10.81□□□□□ -0.68
UPF3A-210ENST00000493727 ANK3Q12955 4377 aaKnown RBP10.8□□□□□ -0.68
UPF3A-210ENST00000493727 RTTNQ86VV8 2226 aa10.8□□□□□ -0.68
UPF3A-210ENST00000493727 TUBAL3A6NHL2 446 aa10.8□□□□□ -0.68
UPF3A-210ENST00000493727 UNC119BA6NIH7 251 aa10.8□□□□□ -0.68
UPF3A-210ENST00000493727 LRRN3E7EW58 273 aa10.8□□□□□ -0.68
UPF3A-210ENST00000493727 SULT2B1O00204 365 aa10.8□□□□□ -0.68
UPF3A-210ENST00000493727 HPRP00739 348 aa10.8□□□□□ -0.68
UPF3A-210ENST00000493727 MT-ATP6P00846 226 aa10.8□□□□□ -0.68
UPF3A-210ENST00000493727 IGF2P01344 180 aa10.8□□□□□ -0.68
UPF3A-210ENST00000493727 MAKP20794 623 aa10.8□□□□□ -0.68
UPF3A-210ENST00000493727 FPR3P25089 353 aa10.8□□□□□ -0.68
UPF3A-210ENST00000493727 SHC1P29353 583 aa10.8□□□□□ -0.68
UPF3A-210ENST00000493727 VHLP40337 213 aa10.8□□□□□ -0.68
UPF3A-210ENST00000493727 STARP49675 285 aa10.8□□□□□ -0.68
UPF3A-210ENST00000493727 DAPP51397 102 aa10.8□□□□□ -0.68
UPF3A-210ENST00000493727 RAD23AP54725 363 aa10.8□□□□□ -0.68
UPF3A-210ENST00000493727 RPS3AP61247 264 aaKnown RBP10.8□□□□□ -0.68
UPF3A-210ENST00000493727 CSNK2A1P68400 391 aaPredicted RBP10.8□□□□□ -0.68
UPF3A-210ENST00000493727 ADAM8P78325 824 aa10.8□□□□□ -0.68
UPF3A-210ENST00000493727 MFSD13AQ14CX5 517 aa10.8□□□□□ -0.68
UPF3A-210ENST00000493727 DAZAP2Q15038 168 aaPredicted RBP10.8□□□□□ -0.68
UPF3A-210ENST00000493727 ZNF74Q16587 644 aa10.8□□□□□ -0.68
UPF3A-210ENST00000493727 HBMQ6B0K9 141 aa10.8□□□□□ -0.68
UPF3A-210ENST00000493727 ZNF770Q6IQ21 691 aaPredicted RBP10.8□□□□□ -0.68
UPF3A-210ENST00000493727 C1orf94Q6P1W5 598 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms