RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 MED12LQ86YW9 2145 aa12.29□□□□□ -0.44
CCM2-217ENST00000492883 PCNX1Q96RV3 2341 aa12.28□□□□□ -0.44
CCM2-217ENST00000492883 TCRBV3S1A0A5B6 114 aa12.28□□□□□ -0.44
CCM2-217ENST00000492883 UNC119BA6NIH7 251 aa12.28□□□□□ -0.44
CCM2-217ENST00000492883 RPL36A-HNRNPH2H7BZ11 118 aa12.28□□□□□ -0.44
CCM2-217ENST00000492883 GNGT2O14610 69 aa12.28□□□□□ -0.44
CCM2-217ENST00000492883 CIB2O75838 187 aa12.28□□□□□ -0.44
CCM2-217ENST00000492883 CCNB2O95067 398 aa12.28□□□□□ -0.44
CCM2-217ENST00000492883 GOSR1O95249 250 aa12.28□□□□□ -0.44
CCM2-217ENST00000492883 CST1P01037 141 aa12.28□□□□□ -0.44
CCM2-217ENST00000492883 HOXC12P31275 282 aa12.28□□□□□ -0.44
CCM2-217ENST00000492883 CSNK1A1P48729 337 aa12.28□□□□□ -0.44
CCM2-217ENST00000492883 RPS4XP62701 263 aaKnown RBP12.28□□□□□ -0.44
CCM2-217ENST00000492883 TOP3AQ13472 1001 aaPredicted RBP12.28□□□□□ -0.44
CCM2-217ENST00000492883 PPA1Q15181 289 aa12.28□□□□□ -0.44
CCM2-217ENST00000492883 ACKR1Q16570 336 aa12.28□□□□□ -0.44
CCM2-217ENST00000492883 PHYHD1Q5SRE7 291 aa12.28□□□□□ -0.44
CCM2-217ENST00000492883 LINGO2Q7L985 606 aa12.28□□□□□ -0.44
CCM2-217ENST00000492883 SSX8Q7RTT4 187 aa12.28□□□□□ -0.44
CCM2-217ENST00000492883 HDDC2Q7Z4H3 204 aa12.28□□□□□ -0.44
CCM2-217ENST00000492883 ZER1Q7Z7L7 766 aa12.28□□□□□ -0.44
CCM2-217ENST00000492883 IGFN1Q86VF2 1251 aa12.28□□□□□ -0.44
CCM2-217ENST00000492883 C1orf162Q8NEQ5 155 aaPredicted RBP12.28□□□□□ -0.44
CCM2-217ENST00000492883 PIK3IP1Q96FE7 263 aa12.28□□□□□ -0.44
CCM2-217ENST00000492883 RSRC1Q96IZ7 334 aaKnown RBP12.28□□□□□ -0.44
CCM2-217ENST00000492883 ULBP2Q9BZM5 246 aa12.28□□□□□ -0.44
CCM2-217ENST00000492883 CLEC4MQ9H2X3 399 aaPredicted RBP12.28□□□□□ -0.44
CCM2-217ENST00000492883 GPR35Q9HC97 309 aa12.28□□□□□ -0.44
CCM2-217ENST00000492883 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.28□□□□□ -0.44
CCM2-217ENST00000492883 STX18Q9P2W9 335 aaKnown RBP12.28□□□□□ -0.44
CCM2-217ENST00000492883 POFUT2Q9Y2G5 429 aa12.28□□□□□ -0.44
CCM2-217ENST00000492883 U3KQV3 271 aa12.28□□□□□ -0.44
CCM2-217ENST00000492883 LRRK2Q5S007 2527 aa12.28□□□□□ -0.44
CCM2-217ENST00000492883 A0A1W2PR80 420 aa12.27□□□□□ -0.45
CCM2-217ENST00000492883 FAM221AA4D161 298 aa12.27□□□□□ -0.45
CCM2-217ENST00000492883 PTP4A3O75365 173 aa12.27□□□□□ -0.45
CCM2-217ENST00000492883 IGHG1P01857 330 aa12.27□□□□□ -0.45
CCM2-217ENST00000492883 ACADSP16219 412 aa12.27□□□□□ -0.45
CCM2-217ENST00000492883 LIMS1P48059 325 aa12.27□□□□□ -0.45
CCM2-217ENST00000492883 SH3BGRP55822 239 aaPredicted RBP12.27□□□□□ -0.45
CCM2-217ENST00000492883 CLRN1P58418 232 aa12.27□□□□□ -0.45
CCM2-217ENST00000492883 ARF1P84077 181 aaKnown RBP12.27□□□□□ -0.45
CCM2-217ENST00000492883 PPP1R8Q12972 351 aaKnown RBP12.27□□□□□ -0.45
CCM2-217ENST00000492883 CEACAM16Q2WEN9 425 aa12.27□□□□□ -0.45
CCM2-217ENST00000492883 BEX5Q5H9J7 111 aa12.27□□□□□ -0.45
CCM2-217ENST00000492883 KLHL24Q6TFL4 600 aa12.27□□□□□ -0.45
CCM2-217ENST00000492883 ASRGL1Q7L266 308 aa12.27□□□□□ -0.45
CCM2-217ENST00000492883 WDFY1Q8IWB7 410 aa12.27□□□□□ -0.45
CCM2-217ENST00000492883 C17orf78Q8N4C9 275 aa12.27□□□□□ -0.45
CCM2-217ENST00000492883 LINC00471Q8N535 108 aa12.27□□□□□ -0.45
CCM2-217ENST00000492883 LRRC75AQ8NAA5 344 aa12.27□□□□□ -0.45
CCM2-217ENST00000492883 OR4C15Q8NGM1 316 aa12.27□□□□□ -0.45
CCM2-217ENST00000492883 OR1K1Q8NGR3 316 aa12.27□□□□□ -0.45
CCM2-217ENST00000492883 GNPDA2Q8TDQ7 276 aa12.27□□□□□ -0.45
CCM2-217ENST00000492883 ASB10Q8WXI3 467 aa12.27□□□□□ -0.45
CCM2-217ENST00000492883 TMEM54Q969K7 222 aa12.27□□□□□ -0.45
CCM2-217ENST00000492883 TXNIPQ9H3M7 391 aa12.27□□□□□ -0.45
CCM2-217ENST00000492883 CCM2LQ9NUG4 571 aaPredicted RBP12.27□□□□□ -0.45
CCM2-217ENST00000492883 GLTPQ9NZD2 209 aa12.27□□□□□ -0.45
CCM2-217ENST00000492883 ZNF346Q9UL40 294 aaKnown RBP12.27□□□□□ -0.45
CCM2-217ENST00000492883 SIGLEC7Q9Y286 467 aa12.27□□□□□ -0.45
CCM2-217ENST00000492883 A0A096LPE4 126 aa12.26□□□□□ -0.45
CCM2-217ENST00000492883 A0A1W2PPZ6 126 aa12.26□□□□□ -0.45
CCM2-217ENST00000492883 NPIPB13A6NJU9 1138 aa12.26□□□□□ -0.45
CCM2-217ENST00000492883 CYSRT1A8MQ03 144 aa12.26□□□□□ -0.45
CCM2-217ENST00000492883 DEFB108AA8MXU0 73 aa12.26□□□□□ -0.45
CCM2-217ENST00000492883 NPIPB4C9JG80 1138 aa12.26□□□□□ -0.45
CCM2-217ENST00000492883 KLF4O43474 513 aa12.26□□□□□ -0.45
CCM2-217ENST00000492883 FKBP6O75344 327 aa12.26□□□□□ -0.45
CCM2-217ENST00000492883 TRMUO75648 421 aaKnown RBP12.26□□□□□ -0.45
CCM2-217ENST00000492883 NDUFB2O95178 105 aa12.26□□□□□ -0.45
CCM2-217ENST00000492883 HRGP04196 525 aa12.26□□□□□ -0.45
CCM2-217ENST00000492883 PGA4P0DJD7 388 aa12.26□□□□□ -0.45
CCM2-217ENST00000492883 PGA3P0DJD8 388 aa12.26□□□□□ -0.45
CCM2-217ENST00000492883 ACVR1BP36896 505 aa12.26□□□□□ -0.45
CCM2-217ENST00000492883 KRTAP10-9P60411 292 aa12.26□□□□□ -0.45
CCM2-217ENST00000492883 UBE2NP61088 152 aaKnown RBP12.26□□□□□ -0.45
CCM2-217ENST00000492883 RPL27P61353 136 aaKnown RBP12.26□□□□□ -0.45
CCM2-217ENST00000492883 ERVK-25P63136 954 aa12.26□□□□□ -0.45
CCM2-217ENST00000492883 RUNX1T1Q06455 604 aa12.26□□□□□ -0.45
CCM2-217ENST00000492883 FHL1Q13642 323 aa12.26□□□□□ -0.45
CCM2-217ENST00000492883 HIKESHIQ53FT3 197 aa12.26□□□□□ -0.45
CCM2-217ENST00000492883 ARMC4Q5T2S8 1044 aa12.26□□□□□ -0.45
CCM2-217ENST00000492883 C1orf94Q6P1W5 598 aa12.26□□□□□ -0.45
CCM2-217ENST00000492883 ANKRD16Q6P6B7 361 aa12.26□□□□□ -0.45
CCM2-217ENST00000492883 WDR31Q8NA23 367 aa12.26□□□□□ -0.45
CCM2-217ENST00000492883 SYT14Q8NB59 555 aa12.26□□□□□ -0.45
CCM2-217ENST00000492883 ZNF837Q96EG3 531 aaPredicted RBP12.26□□□□□ -0.45
CCM2-217ENST00000492883 PLPPR2Q96GM1 343 aa12.26□□□□□ -0.45
CCM2-217ENST00000492883 GPA33Q99795 319 aa12.26□□□□□ -0.45
CCM2-217ENST00000492883 KATNB1Q9BVA0 655 aa12.26□□□□□ -0.45
CCM2-217ENST00000492883 SLC17A5Q9NRA2 495 aa12.26□□□□□ -0.45
CCM2-217ENST00000492883 GRHPRQ9UBQ7 328 aa12.26□□□□□ -0.45
CCM2-217ENST00000492883 AMDHD2Q9Y303 409 aa12.26□□□□□ -0.45
CCM2-217ENST00000492883 SLC25A15Q9Y619 301 aa12.26□□□□□ -0.45
CCM2-217ENST00000492883 USP9YO00507 2555 aaPredicted RBP12.26□□□□□ -0.45
CCM2-217ENST00000492883 HCFC1P51610 2035 aa12.25□□□□□ -0.45
CCM2-217ENST00000492883 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.25□□□□□ -0.45
CCM2-217ENST00000492883 ZNF99A8MXY4 864 aaPredicted RBP12.25□□□□□ -0.45
CCM2-217ENST00000492883 CENPBD1B2RD01 187 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms