RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 BIDP55957 195 aa19.34■□□□□ 0.69
VCPKMT-204ENST00000491402 MED21Q13503 144 aa19.34■□□□□ 0.69
VCPKMT-204ENST00000491402 PDK3Q15120 406 aa19.34■□□□□ 0.69
VCPKMT-204ENST00000491402 PTCHD4Q6ZW05 846 aa19.34■□□□□ 0.69
VCPKMT-204ENST00000491402 THAP5Q7Z6K1 395 aa19.34■□□□□ 0.69
VCPKMT-204ENST00000491402 ZIC4Q8N9L1 334 aa19.34■□□□□ 0.69
VCPKMT-204ENST00000491402 ST6GALNAC3Q8NDV1 305 aa19.34■□□□□ 0.69
VCPKMT-204ENST00000491402 SDR9C7Q8NEX9 313 aa19.34■□□□□ 0.69
VCPKMT-204ENST00000491402 OR8J1Q8NGP2 316 aa19.34■□□□□ 0.69
VCPKMT-204ENST00000491402 TRUB1Q8WWH5 349 aaKnown RBP19.34■□□□□ 0.69
VCPKMT-204ENST00000491402 EMC6Q9BV81 110 aa19.34■□□□□ 0.69
VCPKMT-204ENST00000491402 RNF122Q9H9V4 155 aa19.34■□□□□ 0.69
VCPKMT-204ENST00000491402 IGKV3D-15A0A087WSY6 115 aa19.33■□□□□ 0.68
VCPKMT-204ENST00000491402 TLX2O43763 284 aaPredicted RBP19.33■□□□□ 0.68
VCPKMT-204ENST00000491402 SLC19A2O60779 497 aa19.33■□□□□ 0.68
VCPKMT-204ENST00000491402 IFNGP01579 166 aa19.33■□□□□ 0.68
VCPKMT-204ENST00000491402 CLDN17P56750 224 aa19.33■□□□□ 0.68
VCPKMT-204ENST00000491402 KHDRBS1Q07666 443 aaKnown RBP eCLIP19.33■□□□□ 0.68
VCPKMT-204ENST00000491402 SF3B4Q15427 424 aaKnown RBP eCLIP19.33■□□□□ 0.68
VCPKMT-204ENST00000491402 P4HA3Q7Z4N8 544 aa19.33■□□□□ 0.68
VCPKMT-204ENST00000491402 WDFY1Q8IWB7 410 aa19.33■□□□□ 0.68
VCPKMT-204ENST00000491402 NMNAT3Q96T66 252 aa19.33■□□□□ 0.68
VCPKMT-204ENST00000491402 CALHM2Q9HA72 323 aa19.33■□□□□ 0.68
VCPKMT-204ENST00000491402 KLHL21Q9UJP4 597 aa19.33■□□□□ 0.68
VCPKMT-204ENST00000491402 ZNF835Q9Y2P0 537 aa19.33■□□□□ 0.68
VCPKMT-204ENST00000491402 XKRYO14609 159 aa19.32■□□□□ 0.68
VCPKMT-204ENST00000491402 PRRG2O14669 202 aa19.32■□□□□ 0.68
VCPKMT-204ENST00000491402 MPZL2O60487 215 aa19.32■□□□□ 0.68
VCPKMT-204ENST00000491402 GABRB1P18505 474 aa19.32■□□□□ 0.68
VCPKMT-204ENST00000491402 PTGER4P35408 488 aa19.32■□□□□ 0.68
VCPKMT-204ENST00000491402 CDKN2AP42771 156 aaKnown RBP19.32■□□□□ 0.68
VCPKMT-204ENST00000491402 RUNX1T1Q06455 604 aa19.32■□□□□ 0.68
VCPKMT-204ENST00000491402 CD47Q08722 323 aa19.32■□□□□ 0.68
VCPKMT-204ENST00000491402 MRPL49Q13405 166 aaKnown RBP19.32■□□□□ 0.68
VCPKMT-204ENST00000491402 CRMP1Q14194 572 aa19.32■□□□□ 0.68
VCPKMT-204ENST00000491402 MAD2L1BPQ15013 274 aaPredicted RBP19.32■□□□□ 0.68
VCPKMT-204ENST00000491402 FAM205BPQ63HN1 556 aa19.32■□□□□ 0.68
VCPKMT-204ENST00000491402 NSUN5P2Q63ZY6 315 aa19.32■□□□□ 0.68
VCPKMT-204ENST00000491402 GTF2IRD2BQ6EKJ0 949 aa19.32■□□□□ 0.68
VCPKMT-204ENST00000491402 RPTNQ6XPR3 784 aa19.32■□□□□ 0.68
VCPKMT-204ENST00000491402 GTF2IRD2Q86UP8 949 aa19.32■□□□□ 0.68
VCPKMT-204ENST00000491402 JAZF1Q86VZ6 243 aa19.32■□□□□ 0.68
VCPKMT-204ENST00000491402 CYB561A3Q8NBI2 242 aa19.32■□□□□ 0.68
VCPKMT-204ENST00000491402 SLC37A3Q8NCC5 494 aa19.32■□□□□ 0.68
VCPKMT-204ENST00000491402 RHOXF1Q8NHV9 184 aa19.32■□□□□ 0.68
VCPKMT-204ENST00000491402 TMEM163Q8TC26 289 aa19.32■□□□□ 0.68
VCPKMT-204ENST00000491402 ZNF775Q96BV0 537 aaPredicted RBP19.32■□□□□ 0.68
VCPKMT-204ENST00000491402 BCO1Q9HAY6 547 aa19.32■□□□□ 0.68
VCPKMT-204ENST00000491402 AASSQ9UDR5 926 aa19.32■□□□□ 0.68
VCPKMT-204ENST00000491402 PCDHGB5Q9Y5G0 923 aa19.32■□□□□ 0.68
VCPKMT-204ENST00000491402 SLC35F4A4IF30 521 aa19.32■□□□□ 0.68
VCPKMT-204ENST00000491402 CD8B2A6NJW9 211 aa19.32■□□□□ 0.68
VCPKMT-204ENST00000491402 ARHGEF9O43307 516 aa19.32■□□□□ 0.68
VCPKMT-204ENST00000491402 SNRPGP62308 76 aaKnown RBP19.32■□□□□ 0.68
VCPKMT-204ENST00000491402 RBPJQ06330 500 aa19.32■□□□□ 0.68
VCPKMT-204ENST00000491402 KRT80Q6KB66 452 aa19.32■□□□□ 0.68
VCPKMT-204ENST00000491402 ADCK1Q86TW2 530 aa19.32■□□□□ 0.68
VCPKMT-204ENST00000491402 MCEMP1Q8IX19 187 aa19.32■□□□□ 0.68
VCPKMT-204ENST00000491402 MARVELD2Q8N4S9 558 aa19.32■□□□□ 0.68
VCPKMT-204ENST00000491402 NPEPL1Q8NDH3 523 aa19.32■□□□□ 0.68
VCPKMT-204ENST00000491402 OR6X1Q8NH79 312 aa19.32■□□□□ 0.68
VCPKMT-204ENST00000491402 CNIH3Q8TBE1 160 aa19.32■□□□□ 0.68
VCPKMT-204ENST00000491402 FBLIM1Q8WUP2 373 aa19.32■□□□□ 0.68
VCPKMT-204ENST00000491402 WNT2BQ93097 391 aa19.32■□□□□ 0.68
VCPKMT-204ENST00000491402 EMC3Q9P0I2 261 aa19.32■□□□□ 0.68
VCPKMT-204ENST00000491402 CLEC4AQ9UMR7 237 aa19.32■□□□□ 0.68
VCPKMT-204ENST00000491402 LRCH1Q9Y2L9 728 aa19.32■□□□□ 0.68
VCPKMT-204ENST00000491402 POLEQ07864 2286 aa19.32■□□□□ 0.68
VCPKMT-204ENST00000491402 A6NIZ1 184 aa19.31■□□□□ 0.68
VCPKMT-204ENST00000491402 FAM183AA6NL82 134 aa19.31■□□□□ 0.68
VCPKMT-204ENST00000491402 H7C1C5 153 aa19.31■□□□□ 0.68
VCPKMT-204ENST00000491402 GPR171O14626 319 aa19.31■□□□□ 0.68
VCPKMT-204ENST00000491402 ACVR2AP27037 513 aa19.31■□□□□ 0.68
VCPKMT-204ENST00000491402 RAP1BP61224 184 aa19.31■□□□□ 0.68
VCPKMT-204ENST00000491402 LCN6P62502 163 aa19.31■□□□□ 0.68
VCPKMT-204ENST00000491402 RAP1AP62834 184 aa19.31■□□□□ 0.68
VCPKMT-204ENST00000491402 RTL6Q6ICC9 239 aa19.31■□□□□ 0.68
VCPKMT-204ENST00000491402 LEG1Q6P5S2 330 aa19.31■□□□□ 0.68
VCPKMT-204ENST00000491402 HDDC2Q7Z4H3 204 aa19.31■□□□□ 0.68
VCPKMT-204ENST00000491402 TUSC5Q8IXB3 177 aa19.31■□□□□ 0.68
VCPKMT-204ENST00000491402 APH1BQ8WW43 257 aa19.31■□□□□ 0.68
VCPKMT-204ENST00000491402 HDAC2Q92769 488 aaKnown RBP19.31■□□□□ 0.68
VCPKMT-204ENST00000491402 ADAD1Q96M93 576 aaKnown RBP19.31■□□□□ 0.68
VCPKMT-204ENST00000491402 FN3KQ9H479 309 aa19.31■□□□□ 0.68
VCPKMT-204ENST00000491402 HINT3Q9NQE9 182 aaKnown RBP19.31■□□□□ 0.68
VCPKMT-204ENST00000491402 UBAP1Q9NZ09 502 aa19.31■□□□□ 0.68
VCPKMT-204ENST00000491402 FAM215AQ9Y5M1 114 aa19.31■□□□□ 0.68
VCPKMT-204ENST00000491402 NTF4P34130 210 aa19.3■□□□□ 0.68
VCPKMT-204ENST00000491402 ITGADQ13349 1161 aa19.3■□□□□ 0.68
VCPKMT-204ENST00000491402 CAMK2DQ13557 499 aa19.3■□□□□ 0.68
VCPKMT-204ENST00000491402 FAM26EQ8N5C1 309 aa19.3■□□□□ 0.68
VCPKMT-204ENST00000491402 GALNT11Q8NCW6 608 aa19.3■□□□□ 0.68
VCPKMT-204ENST00000491402 SLC25A44Q96H78 314 aaPredicted RBP19.3■□□□□ 0.68
VCPKMT-204ENST00000491402 LRR1Q96L50 414 aa19.3■□□□□ 0.68
VCPKMT-204ENST00000491402 DDOQ99489 341 aa19.3■□□□□ 0.68
VCPKMT-204ENST00000491402 TP63Q9H3D4 680 aaPredicted RBP19.3■□□□□ 0.68
VCPKMT-204ENST00000491402 GP6Q9HCN6 339 aa19.3■□□□□ 0.68
VCPKMT-204ENST00000491402 ESPL1Q14674 2120 aa19.3■□□□□ 0.68
VCPKMT-204ENST00000491402 PRSS37A4D1T9 235 aa19.29■□□□□ 0.68
VCPKMT-204ENST00000491402 OR6C68A6NDL8 312 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms