RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 CAPZA2P47755 286 aa17.2■□□□□ 0.34
SMC4-222ENST00000490207 CSNK1A1P48729 337 aa17.2■□□□□ 0.34
SMC4-222ENST00000490207 SLC7A2P52569 658 aa17.2■□□□□ 0.34
SMC4-222ENST00000490207 BIDP55957 195 aa17.2■□□□□ 0.34
SMC4-222ENST00000490207 NAAAQ02083 359 aa17.2■□□□□ 0.34
SMC4-222ENST00000490207 LIPEQ05469 1076 aa17.2■□□□□ 0.34
SMC4-222ENST00000490207 TNK1Q13470 666 aa17.2■□□□□ 0.34
SMC4-222ENST00000490207 PIN1Q13526 163 aaPredicted RBP17.2■□□□□ 0.34
SMC4-222ENST00000490207 SLC35D2Q76EJ3 337 aa17.2■□□□□ 0.34
SMC4-222ENST00000490207 HIST3H2AQ7L7L0 130 aa17.2■□□□□ 0.34
SMC4-222ENST00000490207 PFN4Q8NHR9 129 aa17.2■□□□□ 0.34
SMC4-222ENST00000490207 TMEM255BQ8WV15 326 aa17.2■□□□□ 0.34
SMC4-222ENST00000490207 HIST1H2ACQ93077 130 aa17.2■□□□□ 0.34
SMC4-222ENST00000490207 NSRP1Q9H0G5 558 aaKnown RBP17.2■□□□□ 0.34
SMC4-222ENST00000490207 MEPEQ9NQ76 525 aaPredicted RBP17.2■□□□□ 0.34
SMC4-222ENST00000490207 RIMS3Q9UJD0 308 aa17.2■□□□□ 0.34
SMC4-222ENST00000490207 ZNF503-AS2A6NEH8 195 aa17.19■□□□□ 0.34
SMC4-222ENST00000490207 NME4O00746 187 aa17.19■□□□□ 0.34
SMC4-222ENST00000490207 LY6G6DO95868 133 aa17.19■□□□□ 0.34
SMC4-222ENST00000490207 IGKV3-15P01624 115 aa17.19■□□□□ 0.34
SMC4-222ENST00000490207 CRYAAP02489 173 aa17.19■□□□□ 0.34
SMC4-222ENST00000490207 MT-ND1P03886 318 aa17.19■□□□□ 0.34
SMC4-222ENST00000490207 APOBEC3AP31941 199 aaPredicted RBP17.19■□□□□ 0.34
SMC4-222ENST00000490207 NUDT2P50583 147 aa17.19■□□□□ 0.34
SMC4-222ENST00000490207 IDH3GP51553 393 aaPredicted RBP17.19■□□□□ 0.34
SMC4-222ENST00000490207 SEC24CP53992 1094 aa17.19■□□□□ 0.34
SMC4-222ENST00000490207 SELENOWP63302 87 aa17.19■□□□□ 0.34
SMC4-222ENST00000490207 MELKQ14680 651 aa17.19■□□□□ 0.34
SMC4-222ENST00000490207 HACD2Q6Y1H2 254 aa17.19■□□□□ 0.34
SMC4-222ENST00000490207 FAM169BQ8N8A8 192 aa17.19■□□□□ 0.34
SMC4-222ENST00000490207 TMEM239Q8WW34 195 aa17.19■□□□□ 0.34
SMC4-222ENST00000490207 LZICQ8WZA0 190 aa17.19■□□□□ 0.34
SMC4-222ENST00000490207 HOPXQ9BPY8 73 aaPredicted RBP17.19■□□□□ 0.34
SMC4-222ENST00000490207 FAM107BQ9H098 131 aa17.19■□□□□ 0.34
SMC4-222ENST00000490207 SEC61A2Q9H9S3 476 aa17.19■□□□□ 0.34
SMC4-222ENST00000490207 EFCAB1Q9HAE3 211 aa17.19■□□□□ 0.34
SMC4-222ENST00000490207 TAS2R5Q9NYW4 299 aa17.19■□□□□ 0.34
SMC4-222ENST00000490207 POFUT2Q9Y2G5 429 aa17.19■□□□□ 0.34
SMC4-222ENST00000490207 CELA3BP08861 270 aa17.18■□□□□ 0.34
SMC4-222ENST00000490207 THRBP10828 461 aa17.18■□□□□ 0.34
SMC4-222ENST00000490207 CBR1P16152 277 aa17.18■□□□□ 0.34
SMC4-222ENST00000490207 NPRL3Q12980 569 aa17.18■□□□□ 0.34
SMC4-222ENST00000490207 C8orf82Q6P1X6 216 aaPredicted RBP17.18■□□□□ 0.34
SMC4-222ENST00000490207 ZNF813Q6ZN06 617 aa17.18■□□□□ 0.34
SMC4-222ENST00000490207 MDP1Q86V88 176 aa17.18■□□□□ 0.34
SMC4-222ENST00000490207 MYPOPQ86VE0 399 aaPredicted RBP17.18■□□□□ 0.34
SMC4-222ENST00000490207 CCDC36Q8IYA8 594 aa17.18■□□□□ 0.34
SMC4-222ENST00000490207 OR6X1Q8NH79 312 aa17.18■□□□□ 0.34
SMC4-222ENST00000490207 SGTBQ96EQ0 304 aa17.18■□□□□ 0.34
SMC4-222ENST00000490207 PRRC1Q96M27 445 aa17.18■□□□□ 0.34
SMC4-222ENST00000490207 MYLK2Q9H1R3 596 aa17.18■□□□□ 0.34
SMC4-222ENST00000490207 BLOC1S5-TXNDC5H3BN57 136 aa17.17■□□□□ 0.34
SMC4-222ENST00000490207 H7C417 338 aa17.17■□□□□ 0.34
SMC4-222ENST00000490207 CXCR6O00574 342 aa17.17■□□□□ 0.34
SMC4-222ENST00000490207 GSTA4O15217 222 aa17.17■□□□□ 0.34
SMC4-222ENST00000490207 OR7A10O76100 309 aa17.17■□□□□ 0.34
SMC4-222ENST00000490207 IGF2P01344 180 aa17.17■□□□□ 0.34
SMC4-222ENST00000490207 B4GALT1P15291 398 aa17.17■□□□□ 0.34
SMC4-222ENST00000490207 CR1P17927 2039 aa17.17■□□□□ 0.34
SMC4-222ENST00000490207 CALCRP30988 508 aa17.17■□□□□ 0.34
SMC4-222ENST00000490207 ARR3P36575 388 aa17.17■□□□□ 0.34
SMC4-222ENST00000490207 GSK3BP49841 420 aa17.17■□□□□ 0.34
SMC4-222ENST00000490207 NUDT6P53370 316 aa17.17■□□□□ 0.34
SMC4-222ENST00000490207 CHRNB3Q05901 458 aa17.17■□□□□ 0.34
SMC4-222ENST00000490207 RPL18Q07020 188 aaKnown RBP17.17■□□□□ 0.34
SMC4-222ENST00000490207 VTCN1Q7Z7D3 282 aa17.17■□□□□ 0.34
SMC4-222ENST00000490207 NANOS1Q8WY41 292 aaKnown RBP17.17■□□□□ 0.34
SMC4-222ENST00000490207 TMEM54Q969K7 222 aa17.17■□□□□ 0.34
SMC4-222ENST00000490207 ZNF566Q969W8 418 aa17.17■□□□□ 0.34
SMC4-222ENST00000490207 POM121Q96HA1 1249 aa17.17■□□□□ 0.34
SMC4-222ENST00000490207 FOXB1Q99853 325 aa17.17■□□□□ 0.34
SMC4-222ENST00000490207 C20orf141Q9NUB4 165 aa17.17■□□□□ 0.34
SMC4-222ENST00000490207 MED31Q9Y3C7 131 aa17.17■□□□□ 0.34
SMC4-222ENST00000490207 ALPK2Q86TB3 2170 aa17.16■□□□□ 0.34
SMC4-222ENST00000490207 RNF223E7ERA6 249 aa17.16■□□□□ 0.34
SMC4-222ENST00000490207 SSX4O60224 188 aa17.16■□□□□ 0.34
SMC4-222ENST00000490207 PIP5K1CO60331 668 aa17.16■□□□□ 0.34
SMC4-222ENST00000490207 ZNF682O95780 498 aa17.16■□□□□ 0.34
SMC4-222ENST00000490207 BMP4P12644 408 aa17.16■□□□□ 0.34
SMC4-222ENST00000490207 HOXB4P17483 251 aaPredicted RBP17.16■□□□□ 0.34
SMC4-222ENST00000490207 IFNA8P32881 189 aa17.16■□□□□ 0.34
SMC4-222ENST00000490207 ST3GAL3Q11203 375 aa17.16■□□□□ 0.34
SMC4-222ENST00000490207 DNM1P46Q6ZS02 220 aa17.16■□□□□ 0.34
SMC4-222ENST00000490207 ZNF627Q7L945 461 aa17.16■□□□□ 0.34
SMC4-222ENST00000490207 GEMIN6Q8WXD5 167 aaKnown RBP17.16■□□□□ 0.34
SMC4-222ENST00000490207 CMTM5Q96DZ9 223 aa17.16■□□□□ 0.34
SMC4-222ENST00000490207 FBXO17Q96EF6 278 aa17.16■□□□□ 0.34
SMC4-222ENST00000490207 SLC25A44Q96H78 314 aaPredicted RBP17.16■□□□□ 0.34
SMC4-222ENST00000490207 CA10Q9NS85 328 aa17.16■□□□□ 0.34
SMC4-222ENST00000490207 GLTPQ9NZD2 209 aa17.16■□□□□ 0.34
SMC4-222ENST00000490207 A4GNTQ9UNA3 340 aa17.16■□□□□ 0.34
SMC4-222ENST00000490207 MCIDASD6RGH6 385 aa17.15■□□□□ 0.34
SMC4-222ENST00000490207 NDUFAB1O14561 156 aa17.15■□□□□ 0.34
SMC4-222ENST00000490207 SNX3O60493 162 aa17.15■□□□□ 0.34
SMC4-222ENST00000490207 BCL10O95999 233 aa17.15■□□□□ 0.34
SMC4-222ENST00000490207 HLA-HP01893 362 aa17.15■□□□□ 0.34
SMC4-222ENST00000490207 IFNW1P05000 195 aa17.15■□□□□ 0.34
SMC4-222ENST00000490207 CD79AP11912 226 aa17.15■□□□□ 0.34
SMC4-222ENST00000490207 FUT1P19526 365 aa17.15■□□□□ 0.34
SMC4-222ENST00000490207 DRD4P21917 467 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms