RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 STSP08842 583 aa18.65■□□□□ 0.58
SND1-214ENST00000489417 CLUP10909 449 aa18.65■□□□□ 0.58
SND1-214ENST00000489417 ZNF43P17038 809 aa18.65■□□□□ 0.58
SND1-214ENST00000489417 RPS3AP61247 264 aaKnown RBP18.65■□□□□ 0.58
SND1-214ENST00000489417 RPS7P62081 194 aaKnown RBP18.65■□□□□ 0.58
SND1-214ENST00000489417 LCN6P62502 163 aa18.65■□□□□ 0.58
SND1-214ENST00000489417 SRYQ05066 204 aa18.65■□□□□ 0.58
SND1-214ENST00000489417 ST3GAL4Q11206 333 aa18.65■□□□□ 0.58
SND1-214ENST00000489417 PLEKHN1Q494U1 663 aaPredicted RBP18.65■□□□□ 0.58
SND1-214ENST00000489417 SPARTQ8N0X7 666 aa18.65■□□□□ 0.58
SND1-214ENST00000489417 LGALS12Q96DT0 336 aa18.65■□□□□ 0.58
SND1-214ENST00000489417 TXNDC15Q96J42 360 aa18.65■□□□□ 0.58
SND1-214ENST00000489417 SIGLEC11Q96RL6 698 aa18.65■□□□□ 0.58
SND1-214ENST00000489417 MED29Q9NX70 200 aa18.65■□□□□ 0.58
SND1-214ENST00000489417 KLHL13Q9P2N7 655 aa18.65■□□□□ 0.58
SND1-214ENST00000489417 IRGMA1A4Y4 181 aa18.64■□□□□ 0.57
SND1-214ENST00000489417 GYPBP06028 91 aa18.64■□□□□ 0.57
SND1-214ENST00000489417 SPI1P17947 270 aa18.64■□□□□ 0.57
SND1-214ENST00000489417 BIDP55957 195 aa18.64■□□□□ 0.57
SND1-214ENST00000489417 LGALS3BPQ08380 585 aa18.64■□□□□ 0.57
SND1-214ENST00000489417 POU4F3Q15319 338 aa18.64■□□□□ 0.57
SND1-214ENST00000489417 KLHL22Q53GT1 634 aa18.64■□□□□ 0.57
SND1-214ENST00000489417 GTF2IRD2BQ6EKJ0 949 aa18.64■□□□□ 0.57
SND1-214ENST00000489417 GTF2IRD2Q86UP8 949 aa18.64■□□□□ 0.57
SND1-214ENST00000489417 SIAH3Q8IW03 269 aa18.64■□□□□ 0.57
SND1-214ENST00000489417 EXD3Q8N9H8 876 aa18.64■□□□□ 0.57
SND1-214ENST00000489417 KISS1RQ969F8 398 aaPredicted RBP18.64■□□□□ 0.57
SND1-214ENST00000489417 ZNF845Q96IR2 970 aaPredicted RBP18.64■□□□□ 0.57
SND1-214ENST00000489417 RPRD1BQ9NQG5 326 aaKnown RBP18.64■□□□□ 0.57
SND1-214ENST00000489417 VSX1Q9NZR4 365 aaPredicted RBP18.64■□□□□ 0.57
SND1-214ENST00000489417 FRYQ5TBA9 3013 aa18.64■□□□□ 0.57
SND1-214ENST00000489417 A0A1B0GVC2 190 aa18.63■□□□□ 0.57
SND1-214ENST00000489417 PRSS37A4D1T9 235 aa18.63■□□□□ 0.57
SND1-214ENST00000489417 SLC16A1P53985 500 aa18.63■□□□□ 0.57
SND1-214ENST00000489417 RUNX1T1Q06455 604 aa18.63■□□□□ 0.57
SND1-214ENST00000489417 DBPQ10586 325 aaPredicted RBP18.63■□□□□ 0.57
SND1-214ENST00000489417 RAB40BQ12829 278 aa18.63■□□□□ 0.57
SND1-214ENST00000489417 LINC00303Q3SY05 128 aa18.63■□□□□ 0.57
SND1-214ENST00000489417 SLC35D3Q5M8T2 416 aa18.63■□□□□ 0.57
SND1-214ENST00000489417 LCN1P1Q5VSP4 162 aa18.63■□□□□ 0.57
SND1-214ENST00000489417 ABLIM2Q6H8Q1 611 aa18.63■□□□□ 0.57
SND1-214ENST00000489417 HDDC2Q7Z4H3 204 aa18.63■□□□□ 0.57
SND1-214ENST00000489417 SVOPQ8N4V2 548 aa18.63■□□□□ 0.57
SND1-214ENST00000489417 OR52I1Q8NGK6 324 aa18.63■□□□□ 0.57
SND1-214ENST00000489417 C9orf43Q8TAL5 461 aaPredicted RBP18.63■□□□□ 0.57
SND1-214ENST00000489417 TMEM80Q96HE8 168 aa18.63■□□□□ 0.57
SND1-214ENST00000489417 TEAD3Q99594 435 aa18.63■□□□□ 0.57
SND1-214ENST00000489417 TIMP4Q99727 224 aa18.63■□□□□ 0.57
SND1-214ENST00000489417 SF3B5Q9BWJ5 86 aaKnown RBP18.63■□□□□ 0.57
SND1-214ENST00000489417 ASB6Q9NWX5 421 aa18.63■□□□□ 0.57
SND1-214ENST00000489417 PAQR5Q9NXK6 330 aaPredicted RBP18.63■□□□□ 0.57
SND1-214ENST00000489417 MED12Q93074 2177 aa18.63■□□□□ 0.57
SND1-214ENST00000489417 ZFHX4Q86UP3 3567 aa18.62■□□□□ 0.57
SND1-214ENST00000489417 NPIPA2E9PIF3 369 aa18.62■□□□□ 0.57
SND1-214ENST00000489417 NPIPA3F8WFD2 350 aa18.62■□□□□ 0.57
SND1-214ENST00000489417 SYNGR4O95473 234 aa18.62■□□□□ 0.57
SND1-214ENST00000489417 TFAP2AP05549 437 aa18.62■□□□□ 0.57
SND1-214ENST00000489417 FAM87AP0C7U9 286 aa18.62■□□□□ 0.57
SND1-214ENST00000489417 CPN1P15169 458 aa18.62■□□□□ 0.57
SND1-214ENST00000489417 C21orf33P30042 268 aaPredicted RBP18.62■□□□□ 0.57
SND1-214ENST00000489417 GSTT1P30711 240 aa18.62■□□□□ 0.57
SND1-214ENST00000489417 NR1H2P55055 460 aa18.62■□□□□ 0.57
SND1-214ENST00000489417 MVKQ03426 396 aa18.62■□□□□ 0.57
SND1-214ENST00000489417 SLC17A1Q14916 467 aa18.62■□□□□ 0.57
SND1-214ENST00000489417 EEF1A1P5Q5VTE0 462 aa18.62■□□□□ 0.57
SND1-214ENST00000489417 KCTD8Q6ZWB6 473 aa18.62■□□□□ 0.57
SND1-214ENST00000489417 PM20D2Q8IYS1 436 aa18.62■□□□□ 0.57
SND1-214ENST00000489417 OR9K2Q8NGE7 335 aa18.62■□□□□ 0.57
SND1-214ENST00000489417 ROBO4Q8WZ75 1007 aa18.62■□□□□ 0.57
SND1-214ENST00000489417 WDYHV1Q96HA8 205 aa18.62■□□□□ 0.57
SND1-214ENST00000489417 ARHGAP9Q9BRR9 750 aa18.62■□□□□ 0.57
SND1-214ENST00000489417 SYT4Q9H2B2 425 aa18.62■□□□□ 0.57
SND1-214ENST00000489417 VCX3AQ9NNX9 186 aa18.62■□□□□ 0.57
SND1-214ENST00000489417 FGF20Q9NP95 211 aaPredicted RBP18.62■□□□□ 0.57
SND1-214ENST00000489417 ZNF71Q9NQZ8 489 aaPredicted RBP18.62■□□□□ 0.57
SND1-214ENST00000489417 TNFRSF10DQ9UBN6 386 aa18.62■□□□□ 0.57
SND1-214ENST00000489417 TUBD1Q9UJT1 453 aa18.62■□□□□ 0.57
SND1-214ENST00000489417 CACNA1AO00555 2505 aa18.62■□□□□ 0.57
SND1-214ENST00000489417 CELSR3Q9NYQ7 3312 aa18.62■□□□□ 0.57
SND1-214ENST00000489417 SLC22A23A1A5C7 686 aa18.61■□□□□ 0.57
SND1-214ENST00000489417 AQP7O14520 342 aa18.61■□□□□ 0.57
SND1-214ENST00000489417 TRMUO75648 421 aaKnown RBP18.61■□□□□ 0.57
SND1-214ENST00000489417 APOL3O95236 402 aa18.61■□□□□ 0.57
SND1-214ENST00000489417 RAB36O95755 333 aa18.61■□□□□ 0.57
SND1-214ENST00000489417 CRYABP02511 175 aaKnown RBP18.61■□□□□ 0.57
SND1-214ENST00000489417 RPL5P46777 297 aaKnown RBP18.61■□□□□ 0.57
SND1-214ENST00000489417 PON3Q15166 354 aa18.61■□□□□ 0.57
SND1-214ENST00000489417 C3AR1Q16581 482 aa18.61■□□□□ 0.57
SND1-214ENST00000489417 B3GLCTQ6Y288 498 aa18.61■□□□□ 0.57
SND1-214ENST00000489417 CREB3L2Q70SY1 520 aa18.61■□□□□ 0.57
SND1-214ENST00000489417 FCRLAQ7L513 359 aa18.61■□□□□ 0.57
SND1-214ENST00000489417 WDFY1Q8IWB7 410 aa18.61■□□□□ 0.57
SND1-214ENST00000489417 OR2T4Q8NH00 348 aa18.61■□□□□ 0.57
SND1-214ENST00000489417 OR6X1Q8NH79 312 aa18.61■□□□□ 0.57
SND1-214ENST00000489417 PNPLA2Q96AD5 504 aa18.61■□□□□ 0.57
SND1-214ENST00000489417 EMC6Q9BV81 110 aa18.61■□□□□ 0.57
SND1-214ENST00000489417 PLSCR2Q9NRY7 297 aa18.61■□□□□ 0.57
SND1-214ENST00000489417 HAO2Q9NYQ3 351 aa18.61■□□□□ 0.57
SND1-214ENST00000489417 LUZP4Q9P127 313 aa18.61■□□□□ 0.57
SND1-214ENST00000489417 DIMT1Q9UNQ2 313 aaKnown RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms